RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 SCAPERQ9BY12 1400 aa27.93■■■□□ 2.06
TNFSF13-205ENST00000396545 KIF14Q15058 1648 aa27.93■■■□□ 2.06
TNFSF13-205ENST00000396545 MYO5CQ9NQX4 1742 aa27.92■■■□□ 2.06
TNFSF13-205ENST00000396545 TROQ12816 1431 aaPredicted RBP27.91■■■□□ 2.06
TNFSF13-205ENST00000396545 SIGLEC1Q9BZZ2 1709 aa27.91■■■□□ 2.06
TNFSF13-205ENST00000396545 LRRIQ1Q96JM4 1722 aa27.9■■■□□ 2.06
TNFSF13-205ENST00000396545 EFCAB2Q5VUJ9 269 aa27.87■■■□□ 2.05
TNFSF13-205ENST00000396545 RIMS1Q86UR5 1692 aaKnown RBP27.87■■■□□ 2.05
TNFSF13-205ENST00000396545 CLIP1P30622 1438 aa27.85■■■□□ 2.05
TNFSF13-205ENST00000396545 PCF11O94913 1555 aaKnown RBP27.84■■■□□ 2.05
TNFSF13-205ENST00000396545 CASKIN1Q8WXD9 1431 aa27.82■■■□□ 2.04
TNFSF13-205ENST00000396545 LMTK3Q96Q04 1460 aa27.82■■■□□ 2.04
TNFSF13-205ENST00000396545 ARHGAP5Q13017 1502 aa27.81■■■□□ 2.04
TNFSF13-205ENST00000396545 CCDC18Q5T9S5 1454 aa27.79■■■□□ 2.04
TNFSF13-205ENST00000396545 ATP10AO60312 1499 aa27.78■■■□□ 2.04
TNFSF13-205ENST00000396545 ZNF518AQ6AHZ1 1483 aa27.78■■■□□ 2.04
TNFSF13-205ENST00000396545 C9orf84Q5VXU9 1444 aa27.76■■■□□ 2.03
TNFSF13-205ENST00000396545 KDM5CP41229 1560 aa27.76■■■□□ 2.03
TNFSF13-205ENST00000396545 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
TNFSF13-205ENST00000396545 FER1L4A9Z1Z3 1794 aa27.73■■■□□ 2.03
TNFSF13-205ENST00000396545 MLECQ14165 292 aa27.72■■■□□ 2.03
TNFSF13-205ENST00000396545 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
TNFSF13-205ENST00000396545 PREX2Q70Z35 1606 aa27.71■■■□□ 2.03
TNFSF13-205ENST00000396545 FYCO1Q9BQS8 1478 aa27.71■■■□□ 2.03
TNFSF13-205ENST00000396545 AFAP1Q8N556 730 aa27.7■■■□□ 2.03
TNFSF13-205ENST00000396545 ABCC1P33527 1531 aa27.66■■■□□ 2.02
TNFSF13-205ENST00000396545 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
TNFSF13-205ENST00000396545 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
TNFSF13-205ENST00000396545 MLH3Q9UHC1 1453 aa27.63■■■□□ 2.01
TNFSF13-205ENST00000396545 REREQ9P2R6 1566 aa27.63■■■□□ 2.01
TNFSF13-205ENST00000396545 CDC42BPAQ5VT25 1732 aa27.61■■■□□ 2.01
TNFSF13-205ENST00000396545 TRAPPC8Q9Y2L5 1435 aa27.61■■■□□ 2.01
TNFSF13-205ENST00000396545 ITSN2Q9NZM3 1697 aa27.61■■■□□ 2.01
TNFSF13-205ENST00000396545 HSPA2P54652 639 aa27.6■■■□□ 2.01
TNFSF13-205ENST00000396545 ABCA6Q8N139 1617 aa27.6■■■□□ 2.01
TNFSF13-205ENST00000396545 MYT1LQ9UL68 1186 aa27.56■■■□□ 2
TNFSF13-205ENST00000396545 FBXO41Q8TF61 875 aa27.56■■■□□ 2
TNFSF13-205ENST00000396545 AGLP35573 1532 aa27.53■■■□□ 2
TNFSF13-205ENST00000396545 GPATCH8Q9UKJ3 1502 aaKnown RBP27.52■■■□□ 2
TNFSF13-205ENST00000396545 KIDINS220Q9ULH0 1771 aa27.52■■■□□ 2
TNFSF13-205ENST00000396545 PREX1Q8TCU6 1659 aa27.51■■■□□ 2
TNFSF13-205ENST00000396545 SAMD9LQ8IVG5 1584 aa27.51■■□□□ 1.99
TNFSF13-205ENST00000396545 CEBPAP49715 358 aaPredicted RBP27.51■■□□□ 1.99
TNFSF13-205ENST00000396545 SYCP2Q9BX26 1530 aa27.47■■□□□ 1.99
TNFSF13-205ENST00000396545 ZNF777Q9ULD5 760 aaPredicted RBP27.45■■□□□ 1.99
TNFSF13-205ENST00000396545 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
TNFSF13-205ENST00000396545 C3P01024 1663 aa27.41■■□□□ 1.98
TNFSF13-205ENST00000396545 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
TNFSF13-205ENST00000396545 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
TNFSF13-205ENST00000396545 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
TNFSF13-205ENST00000396545 CCNB3Q8WWL7 1395 aa27.4■■□□□ 1.98
TNFSF13-205ENST00000396545 PLEKHH2Q8IVE3 1493 aa27.4■■□□□ 1.98
TNFSF13-205ENST00000396545 CFDP1Q9UEE9 299 aaPredicted RBP27.39■■□□□ 1.97
TNFSF13-205ENST00000396545 SPAG9O60271 1321 aaKnown RBP27.38■■□□□ 1.97
TNFSF13-205ENST00000396545 HNRNPMP52272 730 aaKnown RBP eCLIP27.38■■□□□ 1.97
TNFSF13-205ENST00000396545 CNTLNQ9NXG0 1405 aa27.36■■□□□ 1.97
TNFSF13-205ENST00000396545 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
TNFSF13-205ENST00000396545 ESF1Q9H501 851 aaKnown RBP27.35■■□□□ 1.97
TNFSF13-205ENST00000396545 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
TNFSF13-205ENST00000396545 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
TNFSF13-205ENST00000396545 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
TNFSF13-205ENST00000396545 TIAM1Q13009 1591 aa27.33■■□□□ 1.97
TNFSF13-205ENST00000396545 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
TNFSF13-205ENST00000396545 PLXNC1O60486 1568 aa27.31■■□□□ 1.96
TNFSF13-205ENST00000396545 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
TNFSF13-205ENST00000396545 MROH2AA6NES4 1674 aa27.28■■□□□ 1.96
TNFSF13-205ENST00000396545 CERKQ8TCT0 537 aa27.27■■□□□ 1.96
TNFSF13-205ENST00000396545 A2MP01023 1474 aa27.26■■□□□ 1.95
TNFSF13-205ENST00000396545 DMRT2Q9Y5R5 561 aa27.26■■□□□ 1.95
TNFSF13-205ENST00000396545 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
TNFSF13-205ENST00000396545 MBD5Q9P267 1494 aa27.25■■□□□ 1.95
TNFSF13-205ENST00000396545 NPATQ14207 1427 aa27.23■■□□□ 1.95
TNFSF13-205ENST00000396545 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
TNFSF13-205ENST00000396545 ADGBQ8N7X0 1667 aa27.2■■□□□ 1.94
TNFSF13-205ENST00000396545 PTPRTO14522 1441 aa27.18■■□□□ 1.94
TNFSF13-205ENST00000396545 CLTCQ00610 1675 aaKnown RBP27.17■■□□□ 1.94
TNFSF13-205ENST00000396545 NCOA2Q15596 1464 aa27.16■■□□□ 1.94
TNFSF13-205ENST00000396545 RTEL1-TNFRSF6BF6WH68 1400 aa27.16■■□□□ 1.94
TNFSF13-205ENST00000396545 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
TNFSF13-205ENST00000396545 GGT6Q6P531 493 aa27.12■■□□□ 1.93
TNFSF13-205ENST00000396545 PTPRKQ15262 1439 aa27.11■■□□□ 1.93
TNFSF13-205ENST00000396545 PPP6R1Q9UPN7 881 aa27.11■■□□□ 1.93
TNFSF13-205ENST00000396545 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
TNFSF13-205ENST00000396545 CCDC141Q6ZP82 1450 aa27.1■■□□□ 1.93
TNFSF13-205ENST00000396545 CAMSAP1Q5T5Y3 1602 aa27.09■■□□□ 1.93
TNFSF13-205ENST00000396545 DHX29Q7Z478 1369 aaKnown RBP27.08■■□□□ 1.93
TNFSF13-205ENST00000396545 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
TNFSF13-205ENST00000396545 ZNF142P52746 1687 aaPredicted RBP27.08■■□□□ 1.92
TNFSF13-205ENST00000396545 VPS8Q8N3P4 1428 aa27.07■■□□□ 1.92
TNFSF13-205ENST00000396545 PCGF6Q9BYE7 350 aa27.05■■□□□ 1.92
TNFSF13-205ENST00000396545 LTBP4Q8N2S1 1624 aa27.03■■□□□ 1.92
TNFSF13-205ENST00000396545 CEP170BQ9Y4F5 1589 aaPredicted RBP27.03■■□□□ 1.92
TNFSF13-205ENST00000396545 LRRC9Q6ZRR7 1453 aa27.03■■□□□ 1.92
TNFSF13-205ENST00000396545 RSPH4AQ5TD94 716 aa27.03■■□□□ 1.92
TNFSF13-205ENST00000396545 TRIM26Q12899 539 aaPredicted RBP27.02■■□□□ 1.92
TNFSF13-205ENST00000396545 ARHGEF5Q12774 1597 aa27.02■■□□□ 1.92
TNFSF13-205ENST00000396545 PLA2R1Q13018 1463 aa27.01■■□□□ 1.91
TNFSF13-205ENST00000396545 FAM135AQ9P2D6 1515 aa26.98■■□□□ 1.91
TNFSF13-205ENST00000396545 KIF3BO15066 747 aa26.97■■□□□ 1.91
TNFSF13-205ENST00000396545 TCOF1Q13428 1488 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms