RNA–Protein interactions for RNA: ENST00000396527.7

EIF4A1-202, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-202ENST00000396527 SETD5Q9C0A6 1442 aa11.42□□□□□ -0.58
EIF4A1-202ENST00000396527 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
EIF4A1-202ENST00000396527 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
EIF4A1-202ENST00000396527 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
EIF4A1-202ENST00000396527 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
EIF4A1-202ENST00000396527 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
EIF4A1-202ENST00000396527 ITGAEP38570 1179 aa11.4□□□□□ -0.58
EIF4A1-202ENST00000396527 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.58
EIF4A1-202ENST00000396527 RAB3GAP2Q9H2M9 1393 aa11.4□□□□□ -0.59
EIF4A1-202ENST00000396527 MAP3K4Q9Y6R4 1608 aa11.38□□□□□ -0.59
EIF4A1-202ENST00000396527 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
EIF4A1-202ENST00000396527 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
EIF4A1-202ENST00000396527 PPRC1Q5VV67 1664 aaKnown RBP11.37□□□□□ -0.59
EIF4A1-202ENST00000396527 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
EIF4A1-202ENST00000396527 ATP10BO94823 1461 aa11.36□□□□□ -0.59
EIF4A1-202ENST00000396527 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
EIF4A1-202ENST00000396527 NCOA2Q15596 1464 aa11.34□□□□□ -0.59
EIF4A1-202ENST00000396527 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
EIF4A1-202ENST00000396527 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
EIF4A1-202ENST00000396527 COL17A1Q9UMD9 1497 aaPredicted RBP11.33□□□□□ -0.6
EIF4A1-202ENST00000396527 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
EIF4A1-202ENST00000396527 RAPGEF6Q8TEU7 1601 aa11.33□□□□□ -0.6
EIF4A1-202ENST00000396527 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
EIF4A1-202ENST00000396527 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
EIF4A1-202ENST00000396527 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
EIF4A1-202ENST00000396527 LRRIQ1Q96JM4 1722 aa11.3□□□□□ -0.6
EIF4A1-202ENST00000396527 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
EIF4A1-202ENST00000396527 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
EIF4A1-202ENST00000396527 NUP153P49790 1475 aaKnown RBP11.29□□□□□ -0.6
EIF4A1-202ENST00000396527 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
EIF4A1-202ENST00000396527 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
EIF4A1-202ENST00000396527 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
EIF4A1-202ENST00000396527 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
EIF4A1-202ENST00000396527 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
EIF4A1-202ENST00000396527 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
EIF4A1-202ENST00000396527 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
EIF4A1-202ENST00000396527 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
EIF4A1-202ENST00000396527 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
EIF4A1-202ENST00000396527 NAIPQ13075 1403 aa11.23□□□□□ -0.61
EIF4A1-202ENST00000396527 NEO1Q92859 1461 aa11.23□□□□□ -0.61
EIF4A1-202ENST00000396527 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
EIF4A1-202ENST00000396527 RAPGEF3O95398 923 aa11.22□□□□□ -0.61
EIF4A1-202ENST00000396527 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
EIF4A1-202ENST00000396527 SIN3AQ96ST3 1273 aa11.21□□□□□ -0.61
EIF4A1-202ENST00000396527 TROQ12816 1431 aaPredicted RBP11.19□□□□□ -0.62
EIF4A1-202ENST00000396527 PPP1R15AO75807 674 aaPredicted RBP11.19□□□□□ -0.62
EIF4A1-202ENST00000396527 MIER1Q8N108 512 aa11.19□□□□□ -0.62
EIF4A1-202ENST00000396527 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
EIF4A1-202ENST00000396527 NEUROD1Q13562 356 aa11.18□□□□□ -0.62
EIF4A1-202ENST00000396527 FANCAO15360 1455 aa11.18□□□□□ -0.62
EIF4A1-202ENST00000396527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■■□□ 15.2
EIF4A1-202ENST00000396527 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
EIF4A1-202ENST00000396527 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
EIF4A1-202ENST00000396527 CENPBP07199 599 aaPredicted RBP11.16□□□□□ -0.62
EIF4A1-202ENST00000396527 RRP7BPQ9NSQ0 103 aa11.16□□□□□ -0.62
EIF4A1-202ENST00000396527 CFAP74Q9C0B2 1584 aa11.15□□□□□ -0.62
EIF4A1-202ENST00000396527 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
EIF4A1-202ENST00000396527 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
EIF4A1-202ENST00000396527 ABCC5O15440 1437 aa11.14□□□□□ -0.63
EIF4A1-202ENST00000396527 PLCH2O75038 1416 aa11.14□□□□□ -0.63
EIF4A1-202ENST00000396527 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
EIF4A1-202ENST00000396527 DAPK1P53355 1430 aa11.13□□□□□ -0.63
EIF4A1-202ENST00000396527 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
EIF4A1-202ENST00000396527 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
EIF4A1-202ENST00000396527 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
EIF4A1-202ENST00000396527 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
EIF4A1-202ENST00000396527 MPHOSPH9Q99550 1183 aa11.11□□□□□ -0.63
EIF4A1-202ENST00000396527 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
EIF4A1-202ENST00000396527 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
EIF4A1-202ENST00000396527 KIF14Q15058 1648 aa11.09□□□□□ -0.63
EIF4A1-202ENST00000396527 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
EIF4A1-202ENST00000396527 TONSLQ96HA7 1378 aa11.09□□□□□ -0.63
EIF4A1-202ENST00000396527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.633e-10■■□□□ 11.8
EIF4A1-202ENST00000396527 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
EIF4A1-202ENST00000396527 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
EIF4A1-202ENST00000396527 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
EIF4A1-202ENST00000396527 POGZQ7Z3K3 1410 aa11.08□□□□□ -0.64
EIF4A1-202ENST00000396527 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
EIF4A1-202ENST00000396527 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
EIF4A1-202ENST00000396527 ZFYVE16Q7Z3T8 1539 aa11.07□□□□□ -0.64
EIF4A1-202ENST00000396527 ARHGEF40Q8TER5 1519 aa11.07□□□□□ -0.64
EIF4A1-202ENST00000396527 MYO5CQ9NQX4 1742 aa11.06□□□□□ -0.64
EIF4A1-202ENST00000396527 ZMYM4Q5VZL5 1548 aa11.06□□□□□ -0.64
EIF4A1-202ENST00000396527 PTPRMP28827 1452 aa11.06□□□□□ -0.64
EIF4A1-202ENST00000396527 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
EIF4A1-202ENST00000396527 YEATS2Q9ULM3 1422 aa11.05□□□□□ -0.64
EIF4A1-202ENST00000396527 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
EIF4A1-202ENST00000396527 CAMSAP2Q08AD1 1489 aa11.05□□□□□ -0.64
EIF4A1-202ENST00000396527 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 MLECQ14165 292 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
EIF4A1-202ENST00000396527 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
EIF4A1-202ENST00000396527 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
EIF4A1-202ENST00000396527 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
EIF4A1-202ENST00000396527 ATP10AO60312 1499 aa11.02□□□□□ -0.65
EIF4A1-202ENST00000396527 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms