RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
BDNF-206ENST00000395983 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
BDNF-206ENST00000395983 POLR1AO95602 1720 aaPredicted RBP11.25□□□□□ -0.61
BDNF-206ENST00000395983 DAPK1P53355 1430 aa11.25□□□□□ -0.61
BDNF-206ENST00000395983 FAM9BQ8IZU0 186 aa11.25□□□□□ -0.61
BDNF-206ENST00000395983 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
BDNF-206ENST00000395983 ANKRD30BQ9BXX2 1392 aa11.24□□□□□ -0.61
BDNF-206ENST00000395983 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
BDNF-206ENST00000395983 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
BDNF-206ENST00000395983 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
BDNF-206ENST00000395983 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
BDNF-206ENST00000395983 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.61
BDNF-206ENST00000395983 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.62
BDNF-206ENST00000395983 TEX14Q8IWB6 1497 aa11.2□□□□□ -0.62
BDNF-206ENST00000395983 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
BDNF-206ENST00000395983 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
BDNF-206ENST00000395983 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
BDNF-206ENST00000395983 ABCC5O15440 1437 aa11.19□□□□□ -0.62
BDNF-206ENST00000395983 KIAA0586Q9BVV6 1533 aa11.19□□□□□ -0.62
BDNF-206ENST00000395983 KDM6BO15054 1643 aa11.18□□□□□ -0.62
BDNF-206ENST00000395983 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
BDNF-206ENST00000395983 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
BDNF-206ENST00000395983 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
BDNF-206ENST00000395983 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
BDNF-206ENST00000395983 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
BDNF-206ENST00000395983 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
BDNF-206ENST00000395983 ANKRD30AQ9BXX3 1397 aa11.17□□□□□ -0.62
BDNF-206ENST00000395983 RAPGEF6Q8TEU7 1601 aa11.16□□□□□ -0.62
BDNF-206ENST00000395983 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
BDNF-206ENST00000395983 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
BDNF-206ENST00000395983 NUDCQ9Y266 331 aa11.16□□□□□ -0.62
BDNF-206ENST00000395983 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
BDNF-206ENST00000395983 IFT140Q96RY7 1462 aa11.16□□□□□ -0.62
BDNF-206ENST00000395983 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
BDNF-206ENST00000395983 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
BDNF-206ENST00000395983 FOXD1Q16676 465 aa11.15□□□□□ -0.63
BDNF-206ENST00000395983 USP47Q96K76 1375 aa11.14□□□□□ -0.63
BDNF-206ENST00000395983 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
BDNF-206ENST00000395983 KIF14Q15058 1648 aa11.14□□□□□ -0.63
BDNF-206ENST00000395983 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
BDNF-206ENST00000395983 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
BDNF-206ENST00000395983 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
BDNF-206ENST00000395983 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
BDNF-206ENST00000395983 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
BDNF-206ENST00000395983 MSH5O43196 834 aa11.13□□□□□ -0.63
BDNF-206ENST00000395983 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
BDNF-206ENST00000395983 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
BDNF-206ENST00000395983 NUP153P49790 1475 aaKnown RBP11.12□□□□□ -0.63
BDNF-206ENST00000395983 ARID3CA6NKF2 412 aa11.12□□□□□ -0.63
BDNF-206ENST00000395983 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
BDNF-206ENST00000395983 KIF15Q9NS87 1388 aa11.11□□□□□ -0.63
BDNF-206ENST00000395983 CARMIL2Q6F5E8 1435 aa11.11□□□□□ -0.63
BDNF-206ENST00000395983 ARHGEF12Q9NZN5 1544 aa11.1□□□□□ -0.63
BDNF-206ENST00000395983 PZPP20742 1482 aa11.1□□□□□ -0.63
BDNF-206ENST00000395983 RALBP1Q15311 655 aa11.1□□□□□ -0.63
BDNF-206ENST00000395983 NOP58Q9Y2X3 529 aaKnown RBP11.1□□□□□ -0.63
BDNF-206ENST00000395983 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
BDNF-206ENST00000395983 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
BDNF-206ENST00000395983 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
BDNF-206ENST00000395983 RALGAPBQ86X10 1494 aa11.09□□□□□ -0.63
BDNF-206ENST00000395983 PKD2Q13563 968 aa11.09□□□□□ -0.63
BDNF-206ENST00000395983 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
BDNF-206ENST00000395983 UHRF1BP1Q6BDS2 1440 aa11.09□□□□□ -0.63
BDNF-206ENST00000395983 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
BDNF-206ENST00000395983 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 CROCC2H7BZ55 1655 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
BDNF-206ENST00000395983 GRIN2AQ12879 1464 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
BDNF-206ENST00000395983 RNF123Q5XPI4 1314 aa11.07□□□□□ -0.64
BDNF-206ENST00000395983 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
BDNF-206ENST00000395983 ZNF777Q9ULD5 760 aaPredicted RBP11.07□□□□□ -0.64
BDNF-206ENST00000395983 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
BDNF-206ENST00000395983 KDM5CP41229 1560 aa11.07□□□□□ -0.64
BDNF-206ENST00000395983 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
BDNF-206ENST00000395983 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
BDNF-206ENST00000395983 PDE3BQ13370 1112 aa11.06□□□□□ -0.64
BDNF-206ENST00000395983 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
BDNF-206ENST00000395983 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
BDNF-206ENST00000395983 NUP155O75694 1391 aa11.05□□□□□ -0.64
BDNF-206ENST00000395983 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
BDNF-206ENST00000395983 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
BDNF-206ENST00000395983 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
BDNF-206ENST00000395983 CHMP7Q8WUX9 453 aaPredicted RBP11.03□□□□□ -0.64
BDNF-206ENST00000395983 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
BDNF-206ENST00000395983 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
BDNF-206ENST00000395983 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.64
BDNF-206ENST00000395983 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.65
BDNF-206ENST00000395983 TCERG1O14776 1098 aaKnown RBP11.01□□□□□ -0.65
BDNF-206ENST00000395983 NLRP13Q86W25 1043 aa11.01□□□□□ -0.65
BDNF-206ENST00000395983 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
BDNF-206ENST00000395983 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
BDNF-206ENST00000395983 SYNJ2O15056 1496 aa11□□□□□ -0.65
BDNF-206ENST00000395983 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
BDNF-206ENST00000395983 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
BDNF-206ENST00000395983 INSRP06213 1382 aa10.99□□□□□ -0.65
BDNF-206ENST00000395983 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms