RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 MCCP23508 829 aa22.13■■□□□ 1.13
UBFD1-201ENST00000395878 RALBP1Q15311 655 aa22.13■■□□□ 1.13
UBFD1-201ENST00000395878 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
UBFD1-201ENST00000395878 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
UBFD1-201ENST00000395878 CARMIL2Q6F5E8 1435 aa22.12■■□□□ 1.13
UBFD1-201ENST00000395878 IPO8O15397 1037 aaKnown RBP22.1■■□□□ 1.13
UBFD1-201ENST00000395878 NRDCO43847 1150 aa22.1■■□□□ 1.13
UBFD1-201ENST00000395878 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
UBFD1-201ENST00000395878 HDGFL2Q7Z4V5 671 aaPredicted RBP22.09■■□□□ 1.13
UBFD1-201ENST00000395878 GOLGA6L4A6NEF3 574 aa22.09■■□□□ 1.13
UBFD1-201ENST00000395878 L1TD1Q5T7N2 865 aaKnown RBP22.09■■□□□ 1.13
UBFD1-201ENST00000395878 RBM19Q9Y4C8 960 aaKnown RBP22.08■■□□□ 1.13
UBFD1-201ENST00000395878 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
UBFD1-201ENST00000395878 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
UBFD1-201ENST00000395878 FOXD1Q16676 465 aa22.07■■□□□ 1.12
UBFD1-201ENST00000395878 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
UBFD1-201ENST00000395878 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
UBFD1-201ENST00000395878 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
UBFD1-201ENST00000395878 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
UBFD1-201ENST00000395878 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
UBFD1-201ENST00000395878 NAP1L2Q9ULW6 460 aaPredicted RBP22.05■■□□□ 1.12
UBFD1-201ENST00000395878 NPHP1O15259 732 aa22.05■■□□□ 1.12
UBFD1-201ENST00000395878 CALD1Q05682 793 aaKnown RBP22.05■■□□□ 1.12
UBFD1-201ENST00000395878 RTN4Q9NQC3 1192 aaKnown RBP22.05■■□□□ 1.12
UBFD1-201ENST00000395878 NUP155O75694 1391 aa22.05■■□□□ 1.12
UBFD1-201ENST00000395878 GGT6Q6P531 493 aa22.04■■□□□ 1.12
UBFD1-201ENST00000395878 SOX12O15370 315 aa22.03■■□□□ 1.12
UBFD1-201ENST00000395878 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
UBFD1-201ENST00000395878 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
UBFD1-201ENST00000395878 MLECQ14165 292 aa22.02■■□□□ 1.12
UBFD1-201ENST00000395878 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
UBFD1-201ENST00000395878 RWDD1Q9H446 243 aaPredicted RBP22.01■■□□□ 1.11
UBFD1-201ENST00000395878 TCERG1O14776 1098 aaKnown RBP22.01■■□□□ 1.11
UBFD1-201ENST00000395878 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
UBFD1-201ENST00000395878 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
UBFD1-201ENST00000395878 EFCAB2Q5VUJ9 269 aa21.99■■□□□ 1.11
UBFD1-201ENST00000395878 STK26Q9P289 416 aa21.99■■□□□ 1.11
UBFD1-201ENST00000395878 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
UBFD1-201ENST00000395878 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
UBFD1-201ENST00000395878 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
UBFD1-201ENST00000395878 DEKP35659 375 aaKnown RBP21.96■■□□□ 1.11
UBFD1-201ENST00000395878 PTMSP20962 102 aa21.96■■□□□ 1.11
UBFD1-201ENST00000395878 MSNP26038 577 aaKnown RBP21.96■■□□□ 1.11
UBFD1-201ENST00000395878 SPRYD3Q8NCJ5 442 aa21.95■■□□□ 1.11
UBFD1-201ENST00000395878 ITPRIPQ8IWB1 547 aa21.93■■□□□ 1.1
UBFD1-201ENST00000395878 KIAA1211Q6ZU35 1233 aa21.93■■□□□ 1.1
UBFD1-201ENST00000395878 GBP4Q96PP9 640 aa21.93■■□□□ 1.1
UBFD1-201ENST00000395878 TULP1O00294 542 aaPredicted RBP21.93■■□□□ 1.1
UBFD1-201ENST00000395878 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
UBFD1-201ENST00000395878 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
UBFD1-201ENST00000395878 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
UBFD1-201ENST00000395878 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
UBFD1-201ENST00000395878 APBB1O00213 710 aa21.89■■□□□ 1.09
UBFD1-201ENST00000395878 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
UBFD1-201ENST00000395878 NLRP13Q86W25 1043 aa21.89■■□□□ 1.09
UBFD1-201ENST00000395878 RSPH4AQ5TD94 716 aa21.88■■□□□ 1.09
UBFD1-201ENST00000395878 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
UBFD1-201ENST00000395878 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
UBFD1-201ENST00000395878 DRC7Q8IY82 874 aa21.86■■□□□ 1.09
UBFD1-201ENST00000395878 TERF2IPQ9NYB0 399 aa21.85■■□□□ 1.09
UBFD1-201ENST00000395878 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
UBFD1-201ENST00000395878 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.09
UBFD1-201ENST00000395878 STK31Q9BXU1 1019 aa21.83■■□□□ 1.08
UBFD1-201ENST00000395878 SMC4Q9NTJ3 1288 aa21.83■■□□□ 1.08
UBFD1-201ENST00000395878 SPAG9O60271 1321 aaKnown RBP21.83■■□□□ 1.08
UBFD1-201ENST00000395878 KIF3BO15066 747 aa21.82■■□□□ 1.08
UBFD1-201ENST00000395878 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
UBFD1-201ENST00000395878 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
UBFD1-201ENST00000395878 SLKQ9H2G2 1235 aaPredicted RBP21.81■■□□□ 1.08
UBFD1-201ENST00000395878 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
UBFD1-201ENST00000395878 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
UBFD1-201ENST00000395878 HMMRO75330 724 aa21.79■■□□□ 1.08
UBFD1-201ENST00000395878 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
UBFD1-201ENST00000395878 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.089e-7■■■□□ 15.8
UBFD1-201ENST00000395878 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
UBFD1-201ENST00000395878 CENPJQ9HC77 1338 aaPredicted RBP21.78■■□□□ 1.08
UBFD1-201ENST00000395878 SYAP1Q96A49 352 aaPredicted RBP21.78■■□□□ 1.08
UBFD1-201ENST00000395878 KIF15Q9NS87 1388 aa21.77■■□□□ 1.08
UBFD1-201ENST00000395878 IPO9Q96P70 1041 aaKnown RBP21.77■■□□□ 1.08
UBFD1-201ENST00000395878 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
UBFD1-201ENST00000395878 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
UBFD1-201ENST00000395878 MFAP1P55081 439 aaKnown RBP21.76■■□□□ 1.07
UBFD1-201ENST00000395878 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
UBFD1-201ENST00000395878 KIAA2012Q0VF49 1180 aa21.75■■□□□ 1.07
UBFD1-201ENST00000395878 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
UBFD1-201ENST00000395878 MYBBP1AQ9BQG0 1328 aaKnown RBP21.73■■□□□ 1.07
UBFD1-201ENST00000395878 CCDC146Q8IYE0 955 aa21.73■■□□□ 1.07
UBFD1-201ENST00000395878 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
UBFD1-201ENST00000395878 GZF1Q9H116 711 aaPredicted RBP21.72■■□□□ 1.07
UBFD1-201ENST00000395878 WIZO95785 1651 aa21.72■■□□□ 1.07
UBFD1-201ENST00000395878 CLUAP1Q96AJ1 413 aa21.7■■□□□ 1.06
UBFD1-201ENST00000395878 DHX57Q6P158 1386 aaKnown RBP21.7■■□□□ 1.06
UBFD1-201ENST00000395878 WASHC2CQ9Y4E1 1318 aa21.69■■□□□ 1.06
UBFD1-201ENST00000395878 GOLGA6L3A6NEY3 463 aa21.68■■□□□ 1.06
UBFD1-201ENST00000395878 ISY1Q9ULR0 285 aaKnown RBP21.68■■□□□ 1.06
UBFD1-201ENST00000395878 TRIM6-TRIM34B2RNG4 842 aa21.67■■□□□ 1.06
UBFD1-201ENST00000395878 CCDC144AA2RUR9 1427 aa21.67■■□□□ 1.06
UBFD1-201ENST00000395878 GORABQ5T7V8 394 aa21.66■■□□□ 1.06
UBFD1-201ENST00000395878 ZNF330Q9Y3S2 320 aaPredicted RBP21.66■■□□□ 1.06
UBFD1-201ENST00000395878 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms