RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 SIN3AQ96ST3 1273 aa22.43■■□□□ 1.18
RAPGEF3-203ENST00000395360 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
RAPGEF3-203ENST00000395360 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
RAPGEF3-203ENST00000395360 HFM1A2PYH4 1435 aa22.38■■□□□ 1.17
RAPGEF3-203ENST00000395360 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
RAPGEF3-203ENST00000395360 KIF14Q15058 1648 aa22.34■■□□□ 1.17
RAPGEF3-203ENST00000395360 GTF3C3Q9Y5Q9 886 aa22.32■■□□□ 1.16
RAPGEF3-203ENST00000395360 NAIPQ13075 1403 aa22.32■■□□□ 1.16
RAPGEF3-203ENST00000395360 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
RAPGEF3-203ENST00000395360 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
RAPGEF3-203ENST00000395360 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
RAPGEF3-203ENST00000395360 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
RAPGEF3-203ENST00000395360 GLI2P10070 1586 aa22.27■■□□□ 1.16
RAPGEF3-203ENST00000395360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
RAPGEF3-203ENST00000395360 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
RAPGEF3-203ENST00000395360 ABCA9Q8IUA7 1624 aa22.25■■□□□ 1.15
RAPGEF3-203ENST00000395360 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
RAPGEF3-203ENST00000395360 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
RAPGEF3-203ENST00000395360 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
RAPGEF3-203ENST00000395360 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
RAPGEF3-203ENST00000395360 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
RAPGEF3-203ENST00000395360 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
RAPGEF3-203ENST00000395360 TONSLQ96HA7 1378 aa22.18■■□□□ 1.14
RAPGEF3-203ENST00000395360 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
RAPGEF3-203ENST00000395360 GPATCH8Q9UKJ3 1502 aaKnown RBP22.17■■□□□ 1.14
RAPGEF3-203ENST00000395360 MYO5CQ9NQX4 1742 aa22.17■■□□□ 1.14
RAPGEF3-203ENST00000395360 MAP3K4Q9Y6R4 1608 aa22.16■■□□□ 1.14
RAPGEF3-203ENST00000395360 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
RAPGEF3-203ENST00000395360 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
RAPGEF3-203ENST00000395360 GCC2Q8IWJ2 1684 aa22.15■■□□□ 1.14
RAPGEF3-203ENST00000395360 PLCH2O75038 1416 aa22.15■■□□□ 1.14
RAPGEF3-203ENST00000395360 CD109Q6YHK3 1445 aa22.15■■□□□ 1.14
RAPGEF3-203ENST00000395360 CDC42BPAQ5VT25 1732 aa22.15■■□□□ 1.14
RAPGEF3-203ENST00000395360 PREX2Q70Z35 1606 aa22.15■■□□□ 1.14
RAPGEF3-203ENST00000395360 AKNAQ7Z591 1439 aa22.14■■□□□ 1.13
RAPGEF3-203ENST00000395360 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
RAPGEF3-203ENST00000395360 MYT1Q01538 1121 aa22.1■■□□□ 1.13
RAPGEF3-203ENST00000395360 KDM6BO15054 1643 aa22.09■■□□□ 1.13
RAPGEF3-203ENST00000395360 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
RAPGEF3-203ENST00000395360 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
RAPGEF3-203ENST00000395360 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
RAPGEF3-203ENST00000395360 ZNF644Q9H582 1327 aaPredicted RBP22.08■■□□□ 1.12
RAPGEF3-203ENST00000395360 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.12
RAPGEF3-203ENST00000395360 DAPK1P53355 1430 aa22.07■■□□□ 1.12
RAPGEF3-203ENST00000395360 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
RAPGEF3-203ENST00000395360 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
RAPGEF3-203ENST00000395360 EFCAB2Q5VUJ9 269 aa22.06■■□□□ 1.12
RAPGEF3-203ENST00000395360 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
RAPGEF3-203ENST00000395360 TEX14Q8IWB6 1497 aa22.05■■□□□ 1.12
RAPGEF3-203ENST00000395360 FANCAO15360 1455 aa22.05■■□□□ 1.12
RAPGEF3-203ENST00000395360 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
RAPGEF3-203ENST00000395360 ABCC5O15440 1437 aa22.04■■□□□ 1.12
RAPGEF3-203ENST00000395360 DNMT1P26358 1616 aaKnown RBP22.03■■□□□ 1.12
RAPGEF3-203ENST00000395360 NEO1Q92859 1461 aa22.03■■□□□ 1.12
RAPGEF3-203ENST00000395360 ROCK1Q13464 1354 aa22.02■■□□□ 1.12
RAPGEF3-203ENST00000395360 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.12
RAPGEF3-203ENST00000395360 MPHOSPH9Q99550 1183 aa22.01■■□□□ 1.11
RAPGEF3-203ENST00000395360 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
RAPGEF3-203ENST00000395360 CAMSAP2Q08AD1 1489 aa22■■□□□ 1.11
RAPGEF3-203ENST00000395360 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
RAPGEF3-203ENST00000395360 TSPOAP1O95153 1857 aa21.99■■□□□ 1.11
RAPGEF3-203ENST00000395360 ZNF777Q9ULD5 760 aaPredicted RBP21.98■■□□□ 1.11
RAPGEF3-203ENST00000395360 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
RAPGEF3-203ENST00000395360 ABCC1P33527 1531 aa21.96■■□□□ 1.11
RAPGEF3-203ENST00000395360 FOXD1Q16676 465 aa21.95■■□□□ 1.1
RAPGEF3-203ENST00000395360 ADGRL1O94910 1474 aa21.94■■□□□ 1.1
RAPGEF3-203ENST00000395360 SYCP2Q9BX26 1530 aa21.91■■□□□ 1.1
RAPGEF3-203ENST00000395360 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
RAPGEF3-203ENST00000395360 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
RAPGEF3-203ENST00000395360 MBD5Q9P267 1494 aa21.9■■□□□ 1.1
RAPGEF3-203ENST00000395360 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
RAPGEF3-203ENST00000395360 ARHGEF12Q9NZN5 1544 aa21.88■■□□□ 1.09
RAPGEF3-203ENST00000395360 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
RAPGEF3-203ENST00000395360 NCOA1Q15788 1441 aa21.86■■□□□ 1.09
RAPGEF3-203ENST00000395360 CCDC141Q6ZP82 1450 aa21.86■■□□□ 1.09
RAPGEF3-203ENST00000395360 HNRNPMP52272 730 aaKnown RBP eCLIP21.86■■□□□ 1.09
RAPGEF3-203ENST00000395360 ANKRD30BQ9BXX2 1392 aa21.85■■□□□ 1.09
RAPGEF3-203ENST00000395360 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
RAPGEF3-203ENST00000395360 POGZQ7Z3K3 1410 aa21.84■■□□□ 1.09
RAPGEF3-203ENST00000395360 ZNF518AQ6AHZ1 1483 aa21.84■■□□□ 1.09
RAPGEF3-203ENST00000395360 ADGBQ8N7X0 1667 aa21.83■■□□□ 1.08
RAPGEF3-203ENST00000395360 TRAPPC8Q9Y2L5 1435 aa21.82■■□□□ 1.08
RAPGEF3-203ENST00000395360 ANP32CO43423 234 aa21.82■■□□□ 1.08
RAPGEF3-203ENST00000395360 SHANK2Q9UPX8 1470 aa21.82■■□□□ 1.08
RAPGEF3-203ENST00000395360 CROCC2H7BZ55 1655 aa21.81■■□□□ 1.08
RAPGEF3-203ENST00000395360 RPRD2Q5VT52 1461 aaKnown RBP21.81■■□□□ 1.08
RAPGEF3-203ENST00000395360 ADGRL2O95490 1459 aa21.8■■□□□ 1.08
RAPGEF3-203ENST00000395360 KDM5CP41229 1560 aa21.8■■□□□ 1.08
RAPGEF3-203ENST00000395360 RICTORQ6R327 1708 aa21.79■■□□□ 1.08
RAPGEF3-203ENST00000395360 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
RAPGEF3-203ENST00000395360 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
RAPGEF3-203ENST00000395360 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
RAPGEF3-203ENST00000395360 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
RAPGEF3-203ENST00000395360 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
RAPGEF3-203ENST00000395360 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
RAPGEF3-203ENST00000395360 PZPP20742 1482 aa21.77■■□□□ 1.08
RAPGEF3-203ENST00000395360 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
RAPGEF3-203ENST00000395360 FRMPD1Q5SYB0 1578 aa21.76■■□□□ 1.07
RAPGEF3-203ENST00000395360 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
RAPGEF3-203ENST00000395360 RTEL1-TNFRSF6BF6WH68 1400 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms