RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 NAP1L5Q96NT1 182 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF3-202ENST00000395358 CHIC2Q9UKJ5 165 aa15.35■□□□□ 0.05
RAPGEF3-202ENST00000395358 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
RAPGEF3-202ENST00000395358 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
RAPGEF3-202ENST00000395358 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAPGEF3-202ENST00000395358 CTTNBP2Q8WZ74 1663 aa15.32■□□□□ 0.04
RAPGEF3-202ENST00000395358 UGGT2Q9NYU1 1516 aa15.3■□□□□ 0.04
RAPGEF3-202ENST00000395358 UACAQ9BZF9 1416 aa15.29■□□□□ 0.04
RAPGEF3-202ENST00000395358 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
RAPGEF3-202ENST00000395358 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-202ENST00000395358 EFCAB2Q5VUJ9 269 aa15.28■□□□□ 0.04
RAPGEF3-202ENST00000395358 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
RAPGEF3-202ENST00000395358 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
RAPGEF3-202ENST00000395358 B4GALNT3Q6L9W6 998 aa15.26■□□□□ 0.03
RAPGEF3-202ENST00000395358 PPM1GO15355 546 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-202ENST00000395358 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
RAPGEF3-202ENST00000395358 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
RAPGEF3-202ENST00000395358 ARXQ96QS3 562 aa15.25■□□□□ 0.03
RAPGEF3-202ENST00000395358 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
RAPGEF3-202ENST00000395358 LRRC9Q6ZRR7 1453 aa15.24■□□□□ 0.03
RAPGEF3-202ENST00000395358 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
RAPGEF3-202ENST00000395358 HSP90AA1P07900 732 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-202ENST00000395358 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
RAPGEF3-202ENST00000395358 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-202ENST00000395358 EPRSP07814 1512 aaKnown RBP15.21■□□□□ 0.03
RAPGEF3-202ENST00000395358 KIAA0556O60303 1618 aa15.21■□□□□ 0.03
RAPGEF3-202ENST00000395358 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.02
RAPGEF3-202ENST00000395358 PCF11O94913 1555 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-202ENST00000395358 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-202ENST00000395358 CHD1O14646 1710 aa15.19■□□□□ 0.02
RAPGEF3-202ENST00000395358 DISP1Q96F81 1524 aa15.19■□□□□ 0.02
RAPGEF3-202ENST00000395358 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
RAPGEF3-202ENST00000395358 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
RAPGEF3-202ENST00000395358 CDK13Q14004 1512 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-202ENST00000395358 PDE4CQ08493 712 aa15.16■□□□□ 0.02
RAPGEF3-202ENST00000395358 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
RAPGEF3-202ENST00000395358 FAM69CQ0P6D2 419 aa15.15■□□□□ 0.02
RAPGEF3-202ENST00000395358 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
RAPGEF3-202ENST00000395358 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF3-202ENST00000395358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
RAPGEF3-202ENST00000395358 ESF1Q9H501 851 aaKnown RBP15.14■□□□□ 0.01
RAPGEF3-202ENST00000395358 EHBP1L1Q8N3D4 1523 aa15.14■□□□□ 0.01
RAPGEF3-202ENST00000395358 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.01
RAPGEF3-202ENST00000395358 MYOM3Q5VTT5 1437 aa15.13■□□□□ 0.01
RAPGEF3-202ENST00000395358 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
RAPGEF3-202ENST00000395358 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
RAPGEF3-202ENST00000395358 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
RAPGEF3-202ENST00000395358 RAPGEF6Q8TEU7 1601 aa15.12■□□□□ 0.01
RAPGEF3-202ENST00000395358 FGD6Q6ZV73 1430 aa15.1■□□□□ 0.01
RAPGEF3-202ENST00000395358 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-202ENST00000395358 USP35Q9P2H5 1018 aa15.09■□□□□ 0.01
RAPGEF3-202ENST00000395358 NUP153P49790 1475 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-202ENST00000395358 GSE1Q14687 1217 aa15.08■□□□□ 0.01
RAPGEF3-202ENST00000395358 ATP10BO94823 1461 aa15.08■□□□□ 0
RAPGEF3-202ENST00000395358 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
RAPGEF3-202ENST00000395358 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
RAPGEF3-202ENST00000395358 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
RAPGEF3-202ENST00000395358 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
RAPGEF3-202ENST00000395358 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
RAPGEF3-202ENST00000395358 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
RAPGEF3-202ENST00000395358 SETD5Q9C0A6 1442 aa15.04■□□□□ -0
RAPGEF3-202ENST00000395358 MIA2Q96PC5 1412 aa15.03■□□□□ -0
RAPGEF3-202ENST00000395358 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
RAPGEF3-202ENST00000395358 ABCC2Q92887 1545 aa15.02■□□□□ -0
RAPGEF3-202ENST00000395358 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
RAPGEF3-202ENST00000395358 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
RAPGEF3-202ENST00000395358 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
RAPGEF3-202ENST00000395358 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
RAPGEF3-202ENST00000395358 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
RAPGEF3-202ENST00000395358 KIF14Q15058 1648 aa14.98□□□□□ -0.01
RAPGEF3-202ENST00000395358 ASXL2Q76L83 1435 aa14.98□□□□□ -0.01
RAPGEF3-202ENST00000395358 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
RAPGEF3-202ENST00000395358 RBM10P98175 930 aaKnown RBP14.97□□□□□ -0.01
RAPGEF3-202ENST00000395358 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.01
RAPGEF3-202ENST00000395358 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF3-202ENST00000395358 CD109Q6YHK3 1445 aa14.96□□□□□ -0.01
RAPGEF3-202ENST00000395358 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
RAPGEF3-202ENST00000395358 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
RAPGEF3-202ENST00000395358 ZNF326Q5BKZ1 582 aaKnown RBP14.95□□□□□ -0.02
RAPGEF3-202ENST00000395358 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
RAPGEF3-202ENST00000395358 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
RAPGEF3-202ENST00000395358 AFAP1Q8N556 730 aa14.94□□□□□ -0.02
RAPGEF3-202ENST00000395358 KANK1Q14678 1352 aa14.94□□□□□ -0.02
RAPGEF3-202ENST00000395358 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
RAPGEF3-202ENST00000395358 CHGAP10645 457 aaKnown RBP14.93□□□□□ -0.02
RAPGEF3-202ENST00000395358 GGT6Q6P531 493 aa14.93□□□□□ -0.02
RAPGEF3-202ENST00000395358 ABCA8O94911 1581 aa14.93□□□□□ -0.02
RAPGEF3-202ENST00000395358 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
RAPGEF3-202ENST00000395358 KIF3BO15066 747 aa14.92□□□□□ -0.02
RAPGEF3-202ENST00000395358 STAG3Q9UJ98 1225 aa14.92□□□□□ -0.02
RAPGEF3-202ENST00000395358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.92□□□□□ -0.02
RAPGEF3-202ENST00000395358 UHRF1BP1LA0JNW5 1464 aa14.92□□□□□ -0.02
RAPGEF3-202ENST00000395358 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
RAPGEF3-202ENST00000395358 RRP9O43818 475 aaKnown RBP14.91□□□□□ -0.02
RAPGEF3-202ENST00000395358 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 TRIM44Q96DX7 344 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 ARID3AQ99856 593 aa14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 POLR3GLQ9BT43 218 aa14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
RAPGEF3-202ENST00000395358 CCER2I3L3R5 266 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms