RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 CDC42BPBQ9Y5S2 1711 aa19.72■□□□□ 0.75
VPS26A-203ENST00000395098 ABCC5O15440 1437 aa19.68■□□□□ 0.74
VPS26A-203ENST00000395098 PLCH2O75038 1416 aa19.68■□□□□ 0.74
VPS26A-203ENST00000395098 DAPK1P53355 1430 aa19.68■□□□□ 0.74
VPS26A-203ENST00000395098 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
VPS26A-203ENST00000395098 MYO5CQ9NQX4 1742 aa19.67■□□□□ 0.74
VPS26A-203ENST00000395098 CHIC2Q9UKJ5 165 aa19.67■□□□□ 0.74
VPS26A-203ENST00000395098 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
VPS26A-203ENST00000395098 DNMT1P26358 1616 aaKnown RBP19.66■□□□□ 0.74
VPS26A-203ENST00000395098 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
VPS26A-203ENST00000395098 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
VPS26A-203ENST00000395098 SETD5Q9C0A6 1442 aa19.64■□□□□ 0.73
VPS26A-203ENST00000395098 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
VPS26A-203ENST00000395098 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.732e-7■■■■■ 29.2
VPS26A-203ENST00000395098 MBD5Q9P267 1494 aa19.62■□□□□ 0.73
VPS26A-203ENST00000395098 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
VPS26A-203ENST00000395098 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
VPS26A-203ENST00000395098 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
VPS26A-203ENST00000395098 HRCP23327 699 aa19.6■□□□□ 0.73
VPS26A-203ENST00000395098 EFCAB2Q5VUJ9 269 aa19.6■□□□□ 0.73
VPS26A-203ENST00000395098 NAIPQ13075 1403 aa19.6■□□□□ 0.73
VPS26A-203ENST00000395098 AKNAQ7Z591 1439 aa19.59■□□□□ 0.73
VPS26A-203ENST00000395098 ARAP3Q8WWN8 1544 aa19.59■□□□□ 0.73
VPS26A-203ENST00000395098 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
VPS26A-203ENST00000395098 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.72
VPS26A-203ENST00000395098 ARHGEF5Q12774 1597 aa19.56■□□□□ 0.72
VPS26A-203ENST00000395098 CROCC2H7BZ55 1655 aa19.55■□□□□ 0.72
VPS26A-203ENST00000395098 FANCAO15360 1455 aa19.55■□□□□ 0.72
VPS26A-203ENST00000395098 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
VPS26A-203ENST00000395098 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
VPS26A-203ENST00000395098 ROCK1Q13464 1354 aa19.55■□□□□ 0.72
VPS26A-203ENST00000395098 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
VPS26A-203ENST00000395098 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
VPS26A-203ENST00000395098 ABCC1P33527 1531 aa19.53■□□□□ 0.72
VPS26A-203ENST00000395098 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
VPS26A-203ENST00000395098 NCOA1Q15788 1441 aa19.52■□□□□ 0.72
VPS26A-203ENST00000395098 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.72
VPS26A-203ENST00000395098 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.71
VPS26A-203ENST00000395098 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
VPS26A-203ENST00000395098 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 KDM6BO15054 1643 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 GCC2Q8IWJ2 1684 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 TRAPPC8Q9Y2L5 1435 aa19.5■□□□□ 0.71
VPS26A-203ENST00000395098 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
VPS26A-203ENST00000395098 DIP2BQ9P265 1576 aa19.49■□□□□ 0.71
VPS26A-203ENST00000395098 GLI2P10070 1586 aa19.48■□□□□ 0.71
VPS26A-203ENST00000395098 ADGBQ8N7X0 1667 aa19.47■□□□□ 0.71
VPS26A-203ENST00000395098 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
VPS26A-203ENST00000395098 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
VPS26A-203ENST00000395098 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
VPS26A-203ENST00000395098 ADGRL1O94910 1474 aa19.46■□□□□ 0.71
VPS26A-203ENST00000395098 AFAP1Q8N556 730 aa19.45■□□□□ 0.7
VPS26A-203ENST00000395098 SCAPERQ9BY12 1400 aa19.45■□□□□ 0.7
VPS26A-203ENST00000395098 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
VPS26A-203ENST00000395098 KIF15Q9NS87 1388 aa19.41■□□□□ 0.7
VPS26A-203ENST00000395098 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
VPS26A-203ENST00000395098 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.69
VPS26A-203ENST00000395098 NEO1Q92859 1461 aa19.38■□□□□ 0.69
VPS26A-203ENST00000395098 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
VPS26A-203ENST00000395098 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
VPS26A-203ENST00000395098 TRIM52Q96A61 297 aa19.36■□□□□ 0.69
VPS26A-203ENST00000395098 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
VPS26A-203ENST00000395098 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
VPS26A-203ENST00000395098 PLXNC1O60486 1568 aa19.35■□□□□ 0.69
VPS26A-203ENST00000395098 PPRC1Q5VV67 1664 aaKnown RBP19.34■□□□□ 0.69
VPS26A-203ENST00000395098 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
VPS26A-203ENST00000395098 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
VPS26A-203ENST00000395098 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
VPS26A-203ENST00000395098 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
VPS26A-203ENST00000395098 TSPOAP1O95153 1857 aa19.32■□□□□ 0.68
VPS26A-203ENST00000395098 RAPGEF3O95398 923 aa19.32■□□□□ 0.68
VPS26A-203ENST00000395098 INO80Q9ULG1 1556 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-203ENST00000395098 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
VPS26A-203ENST00000395098 ATP7AQ04656 1500 aa19.31■□□□□ 0.68
VPS26A-203ENST00000395098 KDM5CP41229 1560 aa19.29■□□□□ 0.68
VPS26A-203ENST00000395098 DUOX2Q9NRD8 1548 aa19.28■□□□□ 0.68
VPS26A-203ENST00000395098 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
VPS26A-203ENST00000395098 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
VPS26A-203ENST00000395098 TEX14Q8IWB6 1497 aa19.26■□□□□ 0.67
VPS26A-203ENST00000395098 KIDINS220Q9ULH0 1771 aa19.26■□□□□ 0.67
VPS26A-203ENST00000395098 PZPP20742 1482 aa19.26■□□□□ 0.67
VPS26A-203ENST00000395098 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
VPS26A-203ENST00000395098 ACIN1Q9UKV3 1341 aaKnown RBP19.24■□□□□ 0.67
VPS26A-203ENST00000395098 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
VPS26A-203ENST00000395098 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
VPS26A-203ENST00000395098 RICTORQ6R327 1708 aa19.24■□□□□ 0.67
VPS26A-203ENST00000395098 NUP155O75694 1391 aa19.23■□□□□ 0.67
VPS26A-203ENST00000395098 FOXD1Q16676 465 aa19.23■□□□□ 0.67
VPS26A-203ENST00000395098 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
VPS26A-203ENST00000395098 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
VPS26A-203ENST00000395098 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
VPS26A-203ENST00000395098 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
VPS26A-203ENST00000395098 COL17A1Q9UMD9 1497 aaPredicted RBP19.2■□□□□ 0.66
VPS26A-203ENST00000395098 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
VPS26A-203ENST00000395098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.66
VPS26A-203ENST00000395098 UNC13BO14795 1591 aa19.18■□□□□ 0.66
VPS26A-203ENST00000395098 NEUROD1Q13562 356 aa19.18■□□□□ 0.66
VPS26A-203ENST00000395098 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms