RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 MIER1Q8N108 512 aa20.16■□□□□ 0.82
PPP3CA-202ENST00000394853 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.82
PPP3CA-202ENST00000394853 TROQ12816 1431 aaPredicted RBP20.12■□□□□ 0.81
PPP3CA-202ENST00000394853 MIA2Q96PC5 1412 aa20.12■□□□□ 0.81
PPP3CA-202ENST00000394853 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
PPP3CA-202ENST00000394853 FOXD1Q16676 465 aa20.1■□□□□ 0.81
PPP3CA-202ENST00000394853 CHD1O14646 1710 aa20.09■□□□□ 0.81
PPP3CA-202ENST00000394853 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
PPP3CA-202ENST00000394853 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
PPP3CA-202ENST00000394853 ATP10BO94823 1461 aa20.07■□□□□ 0.8
PPP3CA-202ENST00000394853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.8
PPP3CA-202ENST00000394853 KIF14Q15058 1648 aa20.05■□□□□ 0.8
PPP3CA-202ENST00000394853 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
PPP3CA-202ENST00000394853 DAPK1P53355 1430 aa20.04■□□□□ 0.8
PPP3CA-202ENST00000394853 ABCC5O15440 1437 aa20.03■□□□□ 0.8
PPP3CA-202ENST00000394853 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
PPP3CA-202ENST00000394853 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.79
PPP3CA-202ENST00000394853 KDM6BO15054 1643 aa20.02■□□□□ 0.79
PPP3CA-202ENST00000394853 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
PPP3CA-202ENST00000394853 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
PPP3CA-202ENST00000394853 ABCA8O94911 1581 aa20■□□□□ 0.79
PPP3CA-202ENST00000394853 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
PPP3CA-202ENST00000394853 HNRNPMP52272 730 aaKnown RBP eCLIP19.98■□□□□ 0.79
PPP3CA-202ENST00000394853 FAM69CQ0P6D2 419 aa19.98■□□□□ 0.79
PPP3CA-202ENST00000394853 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
PPP3CA-202ENST00000394853 CAMSAP2Q08AD1 1489 aa19.98■□□□□ 0.79
PPP3CA-202ENST00000394853 SLC4A1APQ9BWU0 796 aaKnown RBP19.95■□□□□ 0.78
PPP3CA-202ENST00000394853 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
PPP3CA-202ENST00000394853 PLEKHG5O94827 1062 aa19.91■□□□□ 0.78
PPP3CA-202ENST00000394853 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
PPP3CA-202ENST00000394853 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
PPP3CA-202ENST00000394853 DNMT1P26358 1616 aaKnown RBP19.9■□□□□ 0.78
PPP3CA-202ENST00000394853 AKNAQ7Z591 1439 aa19.9■□□□□ 0.78
PPP3CA-202ENST00000394853 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.78
PPP3CA-202ENST00000394853 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
PPP3CA-202ENST00000394853 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
PPP3CA-202ENST00000394853 DENND4BO75064 1496 aaPredicted RBP19.87■□□□□ 0.77
PPP3CA-202ENST00000394853 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
PPP3CA-202ENST00000394853 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
PPP3CA-202ENST00000394853 NCOA1Q15788 1441 aa19.86■□□□□ 0.77
PPP3CA-202ENST00000394853 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
PPP3CA-202ENST00000394853 ABCC10Q5T3U5 1492 aa19.86■□□□□ 0.77
PPP3CA-202ENST00000394853 ITSN2Q9NZM3 1697 aa19.85■□□□□ 0.77
PPP3CA-202ENST00000394853 ANKRD30AQ9BXX3 1397 aa19.84■□□□□ 0.77
PPP3CA-202ENST00000394853 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
PPP3CA-202ENST00000394853 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.77
PPP3CA-202ENST00000394853 ADCY10Q96PN6 1610 aa19.83■□□□□ 0.76
PPP3CA-202ENST00000394853 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
PPP3CA-202ENST00000394853 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
PPP3CA-202ENST00000394853 MLECQ14165 292 aa19.81■□□□□ 0.76
PPP3CA-202ENST00000394853 PKD2Q13563 968 aa19.8■□□□□ 0.76
PPP3CA-202ENST00000394853 C9orf84Q5VXU9 1444 aa19.79■□□□□ 0.76
PPP3CA-202ENST00000394853 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
PPP3CA-202ENST00000394853 ANKRD50Q9ULJ7 1429 aa19.78■□□□□ 0.76
PPP3CA-202ENST00000394853 ABCC2Q92887 1545 aa19.77■□□□□ 0.75
PPP3CA-202ENST00000394853 NUP155O75694 1391 aa19.76■□□□□ 0.75
PPP3CA-202ENST00000394853 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
PPP3CA-202ENST00000394853 GGT6Q6P531 493 aa19.75■□□□□ 0.75
PPP3CA-202ENST00000394853 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
PPP3CA-202ENST00000394853 ARHGAP5Q13017 1502 aa19.74■□□□□ 0.75
PPP3CA-202ENST00000394853 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
PPP3CA-202ENST00000394853 KIF15Q9NS87 1388 aa19.74■□□□□ 0.75
PPP3CA-202ENST00000394853 SPAG9O60271 1321 aaKnown RBP19.73■□□□□ 0.75
PPP3CA-202ENST00000394853 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
PPP3CA-202ENST00000394853 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
PPP3CA-202ENST00000394853 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
PPP3CA-202ENST00000394853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.7■□□□□ 0.74
PPP3CA-202ENST00000394853 PZPP20742 1482 aa19.7■□□□□ 0.74
PPP3CA-202ENST00000394853 ADGRL2O95490 1459 aa19.69■□□□□ 0.74
PPP3CA-202ENST00000394853 MBD5Q9P267 1494 aa19.69■□□□□ 0.74
PPP3CA-202ENST00000394853 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
PPP3CA-202ENST00000394853 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
PPP3CA-202ENST00000394853 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
PPP3CA-202ENST00000394853 SAMD9LQ8IVG5 1584 aa19.68■□□□□ 0.74
PPP3CA-202ENST00000394853 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
PPP3CA-202ENST00000394853 SYCP2Q9BX26 1530 aa19.67■□□□□ 0.74
PPP3CA-202ENST00000394853 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
PPP3CA-202ENST00000394853 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
PPP3CA-202ENST00000394853 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
PPP3CA-202ENST00000394853 KIF3BO15066 747 aa19.66■□□□□ 0.74
PPP3CA-202ENST00000394853 RSPH4AQ5TD94 716 aa19.66■□□□□ 0.74
PPP3CA-202ENST00000394853 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
PPP3CA-202ENST00000394853 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
PPP3CA-202ENST00000394853 RAPGEF3O95398 923 aa19.64■□□□□ 0.74
PPP3CA-202ENST00000394853 BCANQ96GW7 911 aa19.64■□□□□ 0.73
PPP3CA-202ENST00000394853 ZCCHC11Q5TAX3 1644 aaKnown RBP19.64■□□□□ 0.73
PPP3CA-202ENST00000394853 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
PPP3CA-202ENST00000394853 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
PPP3CA-202ENST00000394853 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
PPP3CA-202ENST00000394853 RPRD2Q5VT52 1461 aaKnown RBP19.63■□□□□ 0.73
PPP3CA-202ENST00000394853 KIAA1107Q9UPP5 1409 aa19.62■□□□□ 0.73
PPP3CA-202ENST00000394853 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
PPP3CA-202ENST00000394853 SHANK2Q9UPX8 1470 aa19.61■□□□□ 0.73
PPP3CA-202ENST00000394853 ANP32CO43423 234 aa19.58■□□□□ 0.73
PPP3CA-202ENST00000394853 PLCH2O75038 1416 aa19.58■□□□□ 0.72
PPP3CA-202ENST00000394853 ARHGEF12Q9NZN5 1544 aa19.57■□□□□ 0.72
PPP3CA-202ENST00000394853 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
PPP3CA-202ENST00000394853 ARHGEF5Q12774 1597 aa19.56■□□□□ 0.72
PPP3CA-202ENST00000394853 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
PPP3CA-202ENST00000394853 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms