RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 RICTORQ6R327 1708 aa29.82■■■□□ 2.36
TRPT1-202ENST00000394546 POGZQ7Z3K3 1410 aa29.81■■■□□ 2.36
TRPT1-202ENST00000394546 VPS8Q8N3P4 1428 aa29.81■■■□□ 2.36
TRPT1-202ENST00000394546 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
TRPT1-202ENST00000394546 ZMYM4Q5VZL5 1548 aa29.78■■■□□ 2.36
TRPT1-202ENST00000394546 PREX2Q70Z35 1606 aa29.77■■■□□ 2.36
TRPT1-202ENST00000394546 CCNB3Q8WWL7 1395 aa29.77■■■□□ 2.36
TRPT1-202ENST00000394546 ARID4BQ4LE39 1312 aaPredicted RBP29.75■■■□□ 2.35
TRPT1-202ENST00000394546 ZNF518AQ6AHZ1 1483 aa29.74■■■□□ 2.35
TRPT1-202ENST00000394546 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
TRPT1-202ENST00000394546 EHBP1L1Q8N3D4 1523 aa29.74■■■□□ 2.35
TRPT1-202ENST00000394546 ARHGEF40Q8TER5 1519 aa29.73■■■□□ 2.35
TRPT1-202ENST00000394546 GPATCH8Q9UKJ3 1502 aaKnown RBP29.72■■■□□ 2.35
TRPT1-202ENST00000394546 CFDP1Q9UEE9 299 aaPredicted RBP29.72■■■□□ 2.35
TRPT1-202ENST00000394546 ZFYVE16Q7Z3T8 1539 aa29.71■■■□□ 2.35
TRPT1-202ENST00000394546 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
TRPT1-202ENST00000394546 AFAP1Q8N556 730 aa29.7■■■□□ 2.35
TRPT1-202ENST00000394546 MYT1LQ9UL68 1186 aa29.7■■■□□ 2.35
TRPT1-202ENST00000394546 CDC42BPAQ5VT25 1732 aa29.69■■■□□ 2.34
TRPT1-202ENST00000394546 YEATS2Q9ULM3 1422 aa29.65■■■□□ 2.34
TRPT1-202ENST00000394546 APLP2Q06481 763 aa29.64■■■□□ 2.34
TRPT1-202ENST00000394546 ABCC1P33527 1531 aa29.64■■■□□ 2.34
TRPT1-202ENST00000394546 TIAM1Q13009 1591 aa29.64■■■□□ 2.33
TRPT1-202ENST00000394546 PLEKHH2Q8IVE3 1493 aa29.63■■■□□ 2.33
TRPT1-202ENST00000394546 ATP10AO60312 1499 aa29.61■■■□□ 2.33
TRPT1-202ENST00000394546 KDM5CP41229 1560 aa29.61■■■□□ 2.33
TRPT1-202ENST00000394546 MAP3K1Q13233 1512 aa29.61■■■□□ 2.33
TRPT1-202ENST00000394546 KIAA1107Q9UPP5 1409 aa29.6■■■□□ 2.33
TRPT1-202ENST00000394546 TRAPPC8Q9Y2L5 1435 aa29.59■■■□□ 2.33
TRPT1-202ENST00000394546 ARHGEF12Q9NZN5 1544 aa29.58■■■□□ 2.33
TRPT1-202ENST00000394546 MLH3Q9UHC1 1453 aa29.58■■■□□ 2.33
TRPT1-202ENST00000394546 C9orf84Q5VXU9 1444 aa29.57■■■□□ 2.32
TRPT1-202ENST00000394546 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
TRPT1-202ENST00000394546 ITSN2Q9NZM3 1697 aa29.56■■■□□ 2.32
TRPT1-202ENST00000394546 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
TRPT1-202ENST00000394546 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
TRPT1-202ENST00000394546 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
TRPT1-202ENST00000394546 HNRNPMP52272 730 aaKnown RBP eCLIP29.55■■■□□ 2.32
TRPT1-202ENST00000394546 SAMD9LQ8IVG5 1584 aa29.55■■■□□ 2.32
TRPT1-202ENST00000394546 BCORL1Q5H9F3 1711 aa29.54■■■□□ 2.32
TRPT1-202ENST00000394546 ADAMTSL3P82987 1691 aa29.52■■■□□ 2.32
TRPT1-202ENST00000394546 SYCP2Q9BX26 1530 aa29.51■■■□□ 2.32
TRPT1-202ENST00000394546 SPAG9O60271 1321 aaKnown RBP29.51■■■□□ 2.32
TRPT1-202ENST00000394546 MLECQ14165 292 aa29.47■■■□□ 2.31
TRPT1-202ENST00000394546 KANK4Q5T7N3 995 aaPredicted RBP29.47■■■□□ 2.31
TRPT1-202ENST00000394546 PTPRMP28827 1452 aa29.45■■■□□ 2.31
TRPT1-202ENST00000394546 RSPH4AQ5TD94 716 aa29.45■■■□□ 2.31
TRPT1-202ENST00000394546 ZNF644Q9H582 1327 aaPredicted RBP29.45■■■□□ 2.3
TRPT1-202ENST00000394546 DIP2CQ9Y2E4 1556 aa29.43■■■□□ 2.3
TRPT1-202ENST00000394546 REREQ9P2R6 1566 aa29.42■■■□□ 2.3
TRPT1-202ENST00000394546 MADDQ8WXG6 1647 aa29.42■■■□□ 2.3
TRPT1-202ENST00000394546 ABCA6Q8N139 1617 aa29.38■■■□□ 2.29
TRPT1-202ENST00000394546 KIDINS220Q9ULH0 1771 aa29.38■■■□□ 2.29
TRPT1-202ENST00000394546 SIGLEC1Q9BZZ2 1709 aa29.37■■■□□ 2.29
TRPT1-202ENST00000394546 MBD5Q9P267 1494 aa29.37■■■□□ 2.29
TRPT1-202ENST00000394546 ATP7AQ04656 1500 aa29.35■■■□□ 2.29
TRPT1-202ENST00000394546 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
TRPT1-202ENST00000394546 AGLP35573 1532 aa29.35■■■□□ 2.29
TRPT1-202ENST00000394546 ESF1Q9H501 851 aaKnown RBP29.33■■■□□ 2.29
TRPT1-202ENST00000394546 MIA2Q96PC5 1412 aa29.33■■■□□ 2.29
TRPT1-202ENST00000394546 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
TRPT1-202ENST00000394546 RTEL1-TNFRSF6BF6WH68 1400 aa29.32■■■□□ 2.28
TRPT1-202ENST00000394546 MYOM3Q5VTT5 1437 aa29.32■■■□□ 2.28
TRPT1-202ENST00000394546 TSPY4P0CV99 314 aa29.31■■■□□ 2.28
TRPT1-202ENST00000394546 TSPY10P0CW01 314 aa29.31■■■□□ 2.28
TRPT1-202ENST00000394546 CCDC141Q6ZP82 1450 aa29.3■■■□□ 2.28
TRPT1-202ENST00000394546 INO80Q9ULG1 1556 aaPredicted RBP29.3■■■□□ 2.28
TRPT1-202ENST00000394546 FER1L4A9Z1Z3 1794 aa29.27■■■□□ 2.28
TRPT1-202ENST00000394546 A2MP01023 1474 aa29.26■■■□□ 2.27
TRPT1-202ENST00000394546 PLPPR3Q6T4P5 718 aa29.26■■■□□ 2.27
TRPT1-202ENST00000394546 ARHGEF5Q12774 1597 aa29.23■■■□□ 2.27
TRPT1-202ENST00000394546 CNTLNQ9NXG0 1405 aa29.19■■■□□ 2.26
TRPT1-202ENST00000394546 ADGBQ8N7X0 1667 aa29.18■■■□□ 2.26
TRPT1-202ENST00000394546 DHX29Q7Z478 1369 aaKnown RBP29.18■■■□□ 2.26
TRPT1-202ENST00000394546 PPP6R1Q9UPN7 881 aa29.17■■■□□ 2.26
TRPT1-202ENST00000394546 PLXNC1O60486 1568 aa29.16■■■□□ 2.26
TRPT1-202ENST00000394546 GGT6Q6P531 493 aa29.13■■■□□ 2.25
TRPT1-202ENST00000394546 CEBPAP49715 358 aaPredicted RBP29.12■■■□□ 2.25
TRPT1-202ENST00000394546 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
TRPT1-202ENST00000394546 PTPN23Q9H3S7 1636 aa29.09■■■□□ 2.25
TRPT1-202ENST00000394546 KIF3BO15066 747 aa29.07■■■□□ 2.24
TRPT1-202ENST00000394546 MAST1Q9Y2H9 1570 aa29.06■■■□□ 2.24
TRPT1-202ENST00000394546 LMTK3Q96Q04 1460 aa29.05■■■□□ 2.24
TRPT1-202ENST00000394546 TCOF1Q13428 1488 aaKnown RBP29.04■■■□□ 2.24
TRPT1-202ENST00000394546 ZMYM3Q14202 1370 aa29.02■■■□□ 2.24
TRPT1-202ENST00000394546 SHANK2Q9UPX8 1470 aa29■■■□□ 2.23
TRPT1-202ENST00000394546 ABCC5O15440 1437 aa29■■■□□ 2.23
TRPT1-202ENST00000394546 MROH2AA6NES4 1674 aa28.99■■■□□ 2.23
TRPT1-202ENST00000394546 C3P01024 1663 aa28.99■■■□□ 2.23
TRPT1-202ENST00000394546 SETD1BQ9UPS6 1966 aaKnown RBP28.99■■■□□ 2.23
TRPT1-202ENST00000394546 DAPK1P53355 1430 aa28.98■■■□□ 2.23
TRPT1-202ENST00000394546 UHRF1BP1Q6BDS2 1440 aa28.98■■■□□ 2.23
TRPT1-202ENST00000394546 FAM50AQ14320 339 aaKnown RBP28.98■■■□□ 2.23
TRPT1-202ENST00000394546 NPATQ14207 1427 aa28.95■■■□□ 2.23
TRPT1-202ENST00000394546 PREX1Q8TCU6 1659 aa28.95■■■□□ 2.22
TRPT1-202ENST00000394546 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
TRPT1-202ENST00000394546 HSPA2P54652 639 aa28.94■■■□□ 2.22
TRPT1-202ENST00000394546 FAM135AQ9P2D6 1515 aa28.94■■■□□ 2.22
TRPT1-202ENST00000394546 DNMT1P26358 1616 aaKnown RBP28.93■■■□□ 2.22
TRPT1-202ENST00000394546 CLTCQ00610 1675 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms