RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
APLF-202ENST00000394342 FANCAO15360 1455 aa13.68□□□□□ -0.22
APLF-202ENST00000394342 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
APLF-202ENST00000394342 PLCH2O75038 1416 aa13.67□□□□□ -0.22
APLF-202ENST00000394342 AKNAQ7Z591 1439 aa13.66□□□□□ -0.22
APLF-202ENST00000394342 VPS8Q8N3P4 1428 aa13.65□□□□□ -0.22
APLF-202ENST00000394342 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
APLF-202ENST00000394342 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
APLF-202ENST00000394342 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
APLF-202ENST00000394342 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
APLF-202ENST00000394342 SUPT6HQ7KZ85 1726 aaKnown RBP13.63□□□□□ -0.23
APLF-202ENST00000394342 DENND4BO75064 1496 aaPredicted RBP13.62□□□□□ -0.23
APLF-202ENST00000394342 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
APLF-202ENST00000394342 ZMYM4Q5VZL5 1548 aa13.61□□□□□ -0.23
APLF-202ENST00000394342 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
APLF-202ENST00000394342 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
APLF-202ENST00000394342 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
APLF-202ENST00000394342 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
APLF-202ENST00000394342 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
APLF-202ENST00000394342 RAPGEF3O95398 923 aa13.57□□□□□ -0.24
APLF-202ENST00000394342 ABCC1P33527 1531 aa13.57□□□□□ -0.24
APLF-202ENST00000394342 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
APLF-202ENST00000394342 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
APLF-202ENST00000394342 KDM5CP41229 1560 aa13.56□□□□□ -0.24
APLF-202ENST00000394342 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
APLF-202ENST00000394342 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
APLF-202ENST00000394342 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
APLF-202ENST00000394342 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
APLF-202ENST00000394342 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
APLF-202ENST00000394342 LRRC9Q6ZRR7 1453 aa13.54□□□□□ -0.24
APLF-202ENST00000394342 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
APLF-202ENST00000394342 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
APLF-202ENST00000394342 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.25
APLF-202ENST00000394342 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
APLF-202ENST00000394342 KIDINS220Q9ULH0 1771 aa13.5□□□□□ -0.25
APLF-202ENST00000394342 SIGLEC1Q9BZZ2 1709 aa13.5□□□□□ -0.25
APLF-202ENST00000394342 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
APLF-202ENST00000394342 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
APLF-202ENST00000394342 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
APLF-202ENST00000394342 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
APLF-202ENST00000394342 ABCA6Q8N139 1617 aa13.48□□□□□ -0.25
APLF-202ENST00000394342 YEATS2Q9ULM3 1422 aa13.47□□□□□ -0.25
APLF-202ENST00000394342 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
APLF-202ENST00000394342 DIP2CQ9Y2E4 1556 aa13.47□□□□□ -0.25
APLF-202ENST00000394342 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
APLF-202ENST00000394342 MLH3Q9UHC1 1453 aa13.47□□□□□ -0.25
APLF-202ENST00000394342 TRAPPC8Q9Y2L5 1435 aa13.47□□□□□ -0.25
APLF-202ENST00000394342 REREQ9P2R6 1566 aa13.46□□□□□ -0.25
APLF-202ENST00000394342 FER1L4A9Z1Z3 1794 aa13.46□□□□□ -0.25
APLF-202ENST00000394342 ATP10AO60312 1499 aa13.45□□□□□ -0.26
APLF-202ENST00000394342 APLP2Q06481 763 aa13.45□□□□□ -0.26
APLF-202ENST00000394342 AFAP1Q8N556 730 aa13.45□□□□□ -0.26
APLF-202ENST00000394342 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
APLF-202ENST00000394342 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
APLF-202ENST00000394342 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
APLF-202ENST00000394342 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
APLF-202ENST00000394342 MADDQ8WXG6 1647 aa13.44□□□□□ -0.26
APLF-202ENST00000394342 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
APLF-202ENST00000394342 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
APLF-202ENST00000394342 RIMS1Q86UR5 1692 aaKnown RBP13.43□□□□□ -0.26
APLF-202ENST00000394342 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
APLF-202ENST00000394342 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
APLF-202ENST00000394342 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
APLF-202ENST00000394342 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
APLF-202ENST00000394342 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.26
APLF-202ENST00000394342 HNRNPMP52272 730 aaKnown RBP eCLIP13.4□□□□□ -0.26
APLF-202ENST00000394342 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
APLF-202ENST00000394342 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
APLF-202ENST00000394342 CROCC2H7BZ55 1655 aa13.39□□□□□ -0.27
APLF-202ENST00000394342 AGLP35573 1532 aa13.39□□□□□ -0.27
APLF-202ENST00000394342 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
APLF-202ENST00000394342 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
APLF-202ENST00000394342 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
APLF-202ENST00000394342 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
APLF-202ENST00000394342 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
APLF-202ENST00000394342 KCNA4P22459 653 aa13.37□□□□□ -0.27
APLF-202ENST00000394342 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
APLF-202ENST00000394342 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
APLF-202ENST00000394342 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
APLF-202ENST00000394342 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
APLF-202ENST00000394342 PTPRMP28827 1452 aa13.35□□□□□ -0.27
APLF-202ENST00000394342 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
APLF-202ENST00000394342 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
APLF-202ENST00000394342 MROH2AA6NES4 1674 aa13.32□□□□□ -0.28
APLF-202ENST00000394342 A2MP01023 1474 aa13.32□□□□□ -0.28
APLF-202ENST00000394342 TCOF1Q13428 1488 aaKnown RBP13.31□□□□□ -0.28
APLF-202ENST00000394342 C3P01024 1663 aa13.31□□□□□ -0.28
APLF-202ENST00000394342 MLECQ14165 292 aa13.3□□□□□ -0.28
APLF-202ENST00000394342 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
APLF-202ENST00000394342 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
APLF-202ENST00000394342 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
APLF-202ENST00000394342 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
APLF-202ENST00000394342 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
APLF-202ENST00000394342 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
APLF-202ENST00000394342 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
APLF-202ENST00000394342 RNF17Q9BXT8 1623 aaKnown RBP13.25□□□□□ -0.29
APLF-202ENST00000394342 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
APLF-202ENST00000394342 ABCC5O15440 1437 aa13.24□□□□□ -0.29
APLF-202ENST00000394342 DAPK1P53355 1430 aa13.24□□□□□ -0.29
APLF-202ENST00000394342 CFAP65Q6ZU64 1925 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms