RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.59
TUBD1-205ENST00000394239 KDM6BO15054 1643 aa18.75■□□□□ 0.59
TUBD1-205ENST00000394239 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
TUBD1-205ENST00000394239 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
TUBD1-205ENST00000394239 NEO1Q92859 1461 aa18.74■□□□□ 0.59
TUBD1-205ENST00000394239 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
TUBD1-205ENST00000394239 ARAP3Q8WWN8 1544 aa18.73■□□□□ 0.59
TUBD1-205ENST00000394239 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
TUBD1-205ENST00000394239 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
TUBD1-205ENST00000394239 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
TUBD1-205ENST00000394239 RAPGEF3O95398 923 aa18.69■□□□□ 0.58
TUBD1-205ENST00000394239 ZNF644Q9H582 1327 aaPredicted RBP18.68■□□□□ 0.58
TUBD1-205ENST00000394239 CFAP74Q9C0B2 1584 aa18.68■□□□□ 0.58
TUBD1-205ENST00000394239 ADGRL1O94910 1474 aa18.67■□□□□ 0.58
TUBD1-205ENST00000394239 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
TUBD1-205ENST00000394239 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
TUBD1-205ENST00000394239 SAMD9LQ8IVG5 1584 aa18.67■□□□□ 0.58
TUBD1-205ENST00000394239 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
TUBD1-205ENST00000394239 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
TUBD1-205ENST00000394239 FRMPD1Q5SYB0 1578 aa18.66■□□□□ 0.58
TUBD1-205ENST00000394239 SCAPERQ9BY12 1400 aa18.65■□□□□ 0.58
TUBD1-205ENST00000394239 ITSN2Q9NZM3 1697 aa18.64■□□□□ 0.57
TUBD1-205ENST00000394239 ABCC1P33527 1531 aa18.63■□□□□ 0.57
TUBD1-205ENST00000394239 DENND4BO75064 1496 aaPredicted RBP18.63■□□□□ 0.57
TUBD1-205ENST00000394239 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
TUBD1-205ENST00000394239 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
TUBD1-205ENST00000394239 POGZQ7Z3K3 1410 aa18.61■□□□□ 0.57
TUBD1-205ENST00000394239 TRAPPC8Q9Y2L5 1435 aa18.61■□□□□ 0.57
TUBD1-205ENST00000394239 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
TUBD1-205ENST00000394239 SYCP2Q9BX26 1530 aa18.6■□□□□ 0.57
TUBD1-205ENST00000394239 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
TUBD1-205ENST00000394239 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
TUBD1-205ENST00000394239 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
TUBD1-205ENST00000394239 MBD5Q9P267 1494 aa18.56■□□□□ 0.56
TUBD1-205ENST00000394239 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
TUBD1-205ENST00000394239 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
TUBD1-205ENST00000394239 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
TUBD1-205ENST00000394239 ZNF518AQ6AHZ1 1483 aa18.54■□□□□ 0.56
TUBD1-205ENST00000394239 KDM5CP41229 1560 aa18.54■□□□□ 0.56
TUBD1-205ENST00000394239 ZMYM4Q5VZL5 1548 aa18.53■□□□□ 0.56
TUBD1-205ENST00000394239 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
TUBD1-205ENST00000394239 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
TUBD1-205ENST00000394239 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
TUBD1-205ENST00000394239 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
TUBD1-205ENST00000394239 ZFYVE16Q7Z3T8 1539 aa18.47■□□□□ 0.55
TUBD1-205ENST00000394239 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
TUBD1-205ENST00000394239 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
TUBD1-205ENST00000394239 KIDINS220Q9ULH0 1771 aa18.46■□□□□ 0.55
TUBD1-205ENST00000394239 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
TUBD1-205ENST00000394239 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
TUBD1-205ENST00000394239 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
TUBD1-205ENST00000394239 ARHGEF5Q12774 1597 aa18.45■□□□□ 0.54
TUBD1-205ENST00000394239 SIGLEC1Q9BZZ2 1709 aa18.45■□□□□ 0.54
TUBD1-205ENST00000394239 SPAG9O60271 1321 aaKnown RBP18.44■□□□□ 0.54
TUBD1-205ENST00000394239 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
TUBD1-205ENST00000394239 INO80Q9ULG1 1556 aaPredicted RBP18.43■□□□□ 0.54
TUBD1-205ENST00000394239 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
TUBD1-205ENST00000394239 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
TUBD1-205ENST00000394239 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
TUBD1-205ENST00000394239 ABCC5O15440 1437 aa18.42■□□□□ 0.54
TUBD1-205ENST00000394239 ATP7AQ04656 1500 aa18.42■□□□□ 0.54
TUBD1-205ENST00000394239 DNMT1P26358 1616 aaKnown RBP18.39■□□□□ 0.53
TUBD1-205ENST00000394239 DAPK1P53355 1430 aa18.39■□□□□ 0.53
TUBD1-205ENST00000394239 ATP10AO60312 1499 aa18.38■□□□□ 0.53
TUBD1-205ENST00000394239 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
TUBD1-205ENST00000394239 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
TUBD1-205ENST00000394239 PTPRKQ15262 1439 aa18.37■□□□□ 0.53
TUBD1-205ENST00000394239 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
TUBD1-205ENST00000394239 CROCC2H7BZ55 1655 aa18.36■□□□□ 0.53
TUBD1-205ENST00000394239 RTEL1-TNFRSF6BF6WH68 1400 aa18.36■□□□□ 0.53
TUBD1-205ENST00000394239 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
TUBD1-205ENST00000394239 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
TUBD1-205ENST00000394239 CHIC2Q9UKJ5 165 aa18.34■□□□□ 0.53
TUBD1-205ENST00000394239 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
TUBD1-205ENST00000394239 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
TUBD1-205ENST00000394239 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
TUBD1-205ENST00000394239 ADGBQ8N7X0 1667 aa18.32■□□□□ 0.52
TUBD1-205ENST00000394239 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
TUBD1-205ENST00000394239 ITGAEP38570 1179 aa18.31■□□□□ 0.52
TUBD1-205ENST00000394239 REREQ9P2R6 1566 aa18.31■□□□□ 0.52
TUBD1-205ENST00000394239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.52
TUBD1-205ENST00000394239 A2MP01023 1474 aa18.31■□□□□ 0.52
TUBD1-205ENST00000394239 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
TUBD1-205ENST00000394239 MLECQ14165 292 aa18.28■□□□□ 0.52
TUBD1-205ENST00000394239 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
TUBD1-205ENST00000394239 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.52
TUBD1-205ENST00000394239 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.51
TUBD1-205ENST00000394239 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
TUBD1-205ENST00000394239 NCOA1Q15788 1441 aa18.26■□□□□ 0.51
TUBD1-205ENST00000394239 AGLP35573 1532 aa18.26■□□□□ 0.51
TUBD1-205ENST00000394239 ADGRL2O95490 1459 aa18.25■□□□□ 0.51
TUBD1-205ENST00000394239 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
TUBD1-205ENST00000394239 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
TUBD1-205ENST00000394239 MADDQ8WXG6 1647 aa18.22■□□□□ 0.51
TUBD1-205ENST00000394239 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
TUBD1-205ENST00000394239 KIF3BO15066 747 aa18.2■□□□□ 0.5
TUBD1-205ENST00000394239 GGT6Q6P531 493 aa18.18■□□□□ 0.5
TUBD1-205ENST00000394239 ROCK1Q13464 1354 aa18.18■□□□□ 0.5
TUBD1-205ENST00000394239 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
TUBD1-205ENST00000394239 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms