RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PLCH2O75038 1416 aa36.92■■■■□ 3.5
LRFN4-202ENST00000393952 ARHGAP5Q13017 1502 aa36.91■■■■□ 3.5
LRFN4-202ENST00000393952 DIP2BQ9P265 1576 aa36.9■■■■□ 3.5
LRFN4-202ENST00000393952 ZNF644Q9H582 1327 aaPredicted RBP36.89■■■■□ 3.5
LRFN4-202ENST00000393952 ZNF777Q9ULD5 760 aaPredicted RBP36.88■■■■□ 3.49
LRFN4-202ENST00000393952 CAMSAP2Q08AD1 1489 aa36.88■■■■□ 3.49
LRFN4-202ENST00000393952 GLI2P10070 1586 aa36.87■■■■□ 3.49
LRFN4-202ENST00000393952 ARAP3Q8WWN8 1544 aa36.85■■■■□ 3.49
LRFN4-202ENST00000393952 SAMD9LQ8IVG5 1584 aa36.82■■■■□ 3.49
LRFN4-202ENST00000393952 CD109Q6YHK3 1445 aa36.82■■■■□ 3.48
LRFN4-202ENST00000393952 ITGAEP38570 1179 aa36.81■■■■□ 3.48
LRFN4-202ENST00000393952 MAP3K4Q9Y6R4 1608 aa36.8■■■■□ 3.48
LRFN4-202ENST00000393952 FAM69CQ0P6D2 419 aa36.79■■■■□ 3.48
LRFN4-202ENST00000393952 EFCAB2Q5VUJ9 269 aa36.78■■■■□ 3.48
LRFN4-202ENST00000393952 KIF13AQ9H1H9 1805 aa36.76■■■■□ 3.47
LRFN4-202ENST00000393952 FANCAO15360 1455 aa36.73■■■■□ 3.47
LRFN4-202ENST00000393952 DNMT1P26358 1616 aaKnown RBP36.71■■■■□ 3.47
LRFN4-202ENST00000393952 PTPRKQ15262 1439 aa36.68■■■■□ 3.46
LRFN4-202ENST00000393952 PLEKHH2Q8IVE3 1493 aa36.67■■■■□ 3.46
LRFN4-202ENST00000393952 SYCP2Q9BX26 1530 aa36.67■■■■□ 3.46
LRFN4-202ENST00000393952 DAPK1P53355 1430 aa36.66■■■■□ 3.46
LRFN4-202ENST00000393952 ABCC1P33527 1531 aa36.66■■■■□ 3.46
LRFN4-202ENST00000393952 ABCC5O15440 1437 aa36.66■■■■□ 3.46
LRFN4-202ENST00000393952 HNRNPMP52272 730 aaKnown RBP eCLIP36.65■■■■□ 3.46
LRFN4-202ENST00000393952 MBD5Q9P267 1494 aa36.65■■■■□ 3.46
LRFN4-202ENST00000393952 CFAP74Q9C0B2 1584 aa36.64■■■■□ 3.46
LRFN4-202ENST00000393952 KIAA1107Q9UPP5 1409 aa36.64■■■■□ 3.46
LRFN4-202ENST00000393952 ARHGEF5Q12774 1597 aa36.63■■■■□ 3.45
LRFN4-202ENST00000393952 TSPOAP1O95153 1857 aa36.62■■■■□ 3.45
LRFN4-202ENST00000393952 ARHGEF12Q9NZN5 1544 aa36.62■■■■□ 3.45
LRFN4-202ENST00000393952 CROCC2H7BZ55 1655 aa36.6■■■■□ 3.45
LRFN4-202ENST00000393952 AKNAQ7Z591 1439 aa36.59■■■■□ 3.45
LRFN4-202ENST00000393952 PPRC1Q5VV67 1664 aaKnown RBP36.59■■■■□ 3.45
LRFN4-202ENST00000393952 ADGRL1O94910 1474 aa36.56■■■■□ 3.44
LRFN4-202ENST00000393952 CCDC141Q6ZP82 1450 aa36.56■■■■□ 3.44
LRFN4-202ENST00000393952 NEO1Q92859 1461 aa36.56■■■■□ 3.44
LRFN4-202ENST00000393952 CHIC2Q9UKJ5 165 aa36.54■■■■□ 3.44
LRFN4-202ENST00000393952 SCAPERQ9BY12 1400 aa36.51■■■■□ 3.44
LRFN4-202ENST00000393952 RSPH4AQ5TD94 716 aa36.51■■■■□ 3.44
LRFN4-202ENST00000393952 TRAPPC8Q9Y2L5 1435 aa36.51■■■■□ 3.43
LRFN4-202ENST00000393952 SHANK2Q9UPX8 1470 aa36.49■■■■□ 3.43
LRFN4-202ENST00000393952 TEX14Q8IWB6 1497 aa36.48■■■■□ 3.43
LRFN4-202ENST00000393952 ADGBQ8N7X0 1667 aa36.46■■■■□ 3.43
LRFN4-202ENST00000393952 C9orf84Q5VXU9 1444 aa36.45■■■■□ 3.43
LRFN4-202ENST00000393952 TSPY4P0CV99 314 aa36.44■■■■□ 3.42
LRFN4-202ENST00000393952 TSPY10P0CW01 314 aa36.44■■■■□ 3.42
LRFN4-202ENST00000393952 TRHP20396 242 aaPredicted RBP36.44■■■■□ 3.42
LRFN4-202ENST00000393952 ROCK1Q13464 1354 aa36.41■■■■□ 3.42
LRFN4-202ENST00000393952 ADGRL2O95490 1459 aa36.41■■■■□ 3.42
LRFN4-202ENST00000393952 RRP7BPQ9NSQ0 103 aa36.4■■■■□ 3.42
LRFN4-202ENST00000393952 MAST1Q9Y2H9 1570 aa36.4■■■■□ 3.42
LRFN4-202ENST00000393952 AFAP1Q8N556 730 aa36.4■■■■□ 3.42
LRFN4-202ENST00000393952 HFM1A2PYH4 1435 aa36.39■■■■□ 3.42
LRFN4-202ENST00000393952 POGZQ7Z3K3 1410 aa36.37■■■■□ 3.41
LRFN4-202ENST00000393952 SETD5Q9C0A6 1442 aa36.37■■■■□ 3.41
LRFN4-202ENST00000393952 NAIPQ13075 1403 aa36.36■■■■□ 3.41
LRFN4-202ENST00000393952 GCC2Q8IWJ2 1684 aa36.36■■■■□ 3.41
LRFN4-202ENST00000393952 NCOA1Q15788 1441 aa36.35■■■■□ 3.41
LRFN4-202ENST00000393952 ANKRD30AQ9BXX3 1397 aa36.35■■■■□ 3.41
LRFN4-202ENST00000393952 DENND4BO75064 1496 aaPredicted RBP36.34■■■■□ 3.41
LRFN4-202ENST00000393952 ZNF518AQ6AHZ1 1483 aa36.34■■■■□ 3.41
LRFN4-202ENST00000393952 SPAG9O60271 1321 aaKnown RBP36.31■■■■□ 3.4
LRFN4-202ENST00000393952 RAB3GAP2Q9H2M9 1393 aa36.3■■■■□ 3.4
LRFN4-202ENST00000393952 RICTORQ6R327 1708 aa36.29■■■■□ 3.4
LRFN4-202ENST00000393952 KDM5CP41229 1560 aa36.29■■■■□ 3.4
LRFN4-202ENST00000393952 ZFYVE16Q7Z3T8 1539 aa36.28■■■■□ 3.4
LRFN4-202ENST00000393952 INO80Q9ULG1 1556 aaPredicted RBP36.27■■■■□ 3.4
LRFN4-202ENST00000393952 RAPGEF3O95398 923 aa36.27■■■■□ 3.4
LRFN4-202ENST00000393952 PLXNC1O60486 1568 aa36.27■■■■□ 3.4
LRFN4-202ENST00000393952 RTEL1-TNFRSF6BF6WH68 1400 aa36.25■■■■□ 3.39
LRFN4-202ENST00000393952 ATP7AQ04656 1500 aa36.24■■■■□ 3.39
LRFN4-202ENST00000393952 FRMPD1Q5SYB0 1578 aa36.24■■■■□ 3.39
LRFN4-202ENST00000393952 KIF15Q9NS87 1388 aa36.23■■■■□ 3.39
LRFN4-202ENST00000393952 KDM6BO15054 1643 aa36.22■■■■□ 3.39
LRFN4-202ENST00000393952 KIDINS220Q9ULH0 1771 aa36.2■■■■□ 3.39
LRFN4-202ENST00000393952 HECW2Q9P2P5 1572 aa36.19■■■■□ 3.38
LRFN4-202ENST00000393952 MYT1LQ9UL68 1186 aa36.18■■■■□ 3.38
LRFN4-202ENST00000393952 MLH3Q9UHC1 1453 aa36.17■■■■□ 3.38
LRFN4-202ENST00000393952 COL17A1Q9UMD9 1497 aaPredicted RBP36.17■■■■□ 3.38
LRFN4-202ENST00000393952 ANKRD50Q9ULJ7 1429 aa36.14■■■■□ 3.38
LRFN4-202ENST00000393952 HRCP23327 699 aa36.13■■■■□ 3.37
LRFN4-202ENST00000393952 ZMYM4Q5VZL5 1548 aa36.11■■■■□ 3.37
LRFN4-202ENST00000393952 DUOX2Q9NRD8 1548 aa36.11■■■■□ 3.37
LRFN4-202ENST00000393952 ABCA6Q8N139 1617 aa36.06■■■■□ 3.36
LRFN4-202ENST00000393952 ERBINQ96RT1 1412 aa36.01■■■■□ 3.35
LRFN4-202ENST00000393952 DIP2CQ9Y2E4 1556 aa36■■■■□ 3.35
LRFN4-202ENST00000393952 YEATS2Q9ULM3 1422 aa36■■■■□ 3.35
LRFN4-202ENST00000393952 MAGI2Q86UL8 1455 aa35.99■■■■□ 3.35
LRFN4-202ENST00000393952 DHX29Q7Z478 1369 aaKnown RBP35.96■■■■□ 3.35
LRFN4-202ENST00000393952 A2MP01023 1474 aa35.96■■■■□ 3.35
LRFN4-202ENST00000393952 DHX57Q6P158 1386 aaKnown RBP35.96■■■■□ 3.35
LRFN4-202ENST00000393952 TRIM52Q96A61 297 aa35.95■■■■□ 3.35
LRFN4-202ENST00000393952 CCER1Q8TC90 406 aaPredicted RBP35.93■■■■□ 3.34
LRFN4-202ENST00000393952 ACIN1Q9UKV3 1341 aaKnown RBP35.9■■■■□ 3.34
LRFN4-202ENST00000393952 EIF2AK4Q9P2K8 1649 aaKnown RBP35.89■■■■□ 3.34
LRFN4-202ENST00000393952 ARHGEF40Q8TER5 1519 aa35.88■■■■□ 3.33
LRFN4-202ENST00000393952 UNC13BO14795 1591 aa35.87■■■■□ 3.33
LRFN4-202ENST00000393952 ATP10AO60312 1499 aa35.84■■■■□ 3.33
LRFN4-202ENST00000393952 KIF3BO15066 747 aa35.81■■■■□ 3.32
LRFN4-202ENST00000393952 KDM5DQ9BY66 1539 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms