RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.5
SNCB-202ENST00000393693 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
SNCB-202ENST00000393693 MLECQ14165 292 aa30.64■■■□□ 2.5
SNCB-202ENST00000393693 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
SNCB-202ENST00000393693 MAGI2Q86UL8 1455 aa30.63■■■□□ 2.49
SNCB-202ENST00000393693 EFCAB2Q5VUJ9 269 aa30.6■■■□□ 2.49
SNCB-202ENST00000393693 CDK11AQ9UQ88 783 aaPredicted RBP30.6■■■□□ 2.49
SNCB-202ENST00000393693 KIF14Q15058 1648 aa30.58■■■□□ 2.49
SNCB-202ENST00000393693 HSPA2P54652 639 aa30.56■■■□□ 2.48
SNCB-202ENST00000393693 FBXO41Q8TF61 875 aa30.55■■■□□ 2.48
SNCB-202ENST00000393693 TROQ12816 1431 aaPredicted RBP30.54■■■□□ 2.48
SNCB-202ENST00000393693 MYO5CQ9NQX4 1742 aa30.53■■■□□ 2.48
SNCB-202ENST00000393693 ATP10AO60312 1499 aa30.5■■■□□ 2.47
SNCB-202ENST00000393693 LRRIQ1Q96JM4 1722 aa30.48■■■□□ 2.47
SNCB-202ENST00000393693 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
SNCB-202ENST00000393693 ARHGAP5Q13017 1502 aa30.47■■■□□ 2.47
SNCB-202ENST00000393693 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
SNCB-202ENST00000393693 CLIP1P30622 1438 aa30.46■■■□□ 2.47
SNCB-202ENST00000393693 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
SNCB-202ENST00000393693 ZNF518AQ6AHZ1 1483 aa30.42■■■□□ 2.46
SNCB-202ENST00000393693 ARHGEF12Q9NZN5 1544 aa30.42■■■□□ 2.46
SNCB-202ENST00000393693 MYT1LQ9UL68 1186 aa30.41■■■□□ 2.46
SNCB-202ENST00000393693 CEBPAP49715 358 aaPredicted RBP30.4■■■□□ 2.46
SNCB-202ENST00000393693 CASKIN1Q8WXD9 1431 aa30.37■■■□□ 2.45
SNCB-202ENST00000393693 KDM5CP41229 1560 aa30.37■■■□□ 2.45
SNCB-202ENST00000393693 CDC42BPBQ9Y5S2 1711 aa30.34■■■□□ 2.45
SNCB-202ENST00000393693 DIP2CQ9Y2E4 1556 aa30.31■■■□□ 2.44
SNCB-202ENST00000393693 CCDC18Q5T9S5 1454 aa30.31■■■□□ 2.44
SNCB-202ENST00000393693 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
SNCB-202ENST00000393693 MLH3Q9UHC1 1453 aa30.27■■■□□ 2.44
SNCB-202ENST00000393693 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
SNCB-202ENST00000393693 ABCC1P33527 1531 aa30.26■■■□□ 2.43
SNCB-202ENST00000393693 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
SNCB-202ENST00000393693 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
SNCB-202ENST00000393693 REREQ9P2R6 1566 aa30.21■■■□□ 2.43
SNCB-202ENST00000393693 CERKQ8TCT0 537 aa30.2■■■□□ 2.43
SNCB-202ENST00000393693 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
SNCB-202ENST00000393693 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
SNCB-202ENST00000393693 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
SNCB-202ENST00000393693 CDC42BPAQ5VT25 1732 aa30.18■■■□□ 2.42
SNCB-202ENST00000393693 AGLP35573 1532 aa30.15■■■□□ 2.42
SNCB-202ENST00000393693 UHRF1BP1Q6BDS2 1440 aa30.14■■■□□ 2.42
SNCB-202ENST00000393693 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
SNCB-202ENST00000393693 ESF1Q9H501 851 aaKnown RBP30.13■■■□□ 2.41
SNCB-202ENST00000393693 GPATCH8Q9UKJ3 1502 aaKnown RBP30.12■■■□□ 2.41
SNCB-202ENST00000393693 HNRNPMP52272 730 aaKnown RBP eCLIP30.11■■■□□ 2.41
SNCB-202ENST00000393693 SAMD9LQ8IVG5 1584 aa30.1■■■□□ 2.41
SNCB-202ENST00000393693 C3P01024 1663 aa30.09■■■□□ 2.41
SNCB-202ENST00000393693 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
SNCB-202ENST00000393693 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
SNCB-202ENST00000393693 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
SNCB-202ENST00000393693 DMRT2Q9Y5R5 561 aa30.05■■■□□ 2.4
SNCB-202ENST00000393693 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
SNCB-202ENST00000393693 CFDP1Q9UEE9 299 aaPredicted RBP30.03■■■□□ 2.4
SNCB-202ENST00000393693 CCNB3Q8WWL7 1395 aa30■■■□□ 2.39
SNCB-202ENST00000393693 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
SNCB-202ENST00000393693 MTUS2Q5JR59 1369 aa29.97■■■□□ 2.39
SNCB-202ENST00000393693 KIAA1107Q9UPP5 1409 aa29.96■■■□□ 2.39
SNCB-202ENST00000393693 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
SNCB-202ENST00000393693 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
SNCB-202ENST00000393693 ZMYM3Q14202 1370 aa29.93■■■□□ 2.38
SNCB-202ENST00000393693 PLEKHH2Q8IVE3 1493 aa29.93■■■□□ 2.38
SNCB-202ENST00000393693 PTPRTO14522 1441 aa29.92■■■□□ 2.38
SNCB-202ENST00000393693 ZNF644Q9H582 1327 aaPredicted RBP29.92■■■□□ 2.38
SNCB-202ENST00000393693 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
SNCB-202ENST00000393693 A2MP01023 1474 aa29.89■■■□□ 2.38
SNCB-202ENST00000393693 GGT6Q6P531 493 aa29.87■■■□□ 2.37
SNCB-202ENST00000393693 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
SNCB-202ENST00000393693 NPATQ14207 1427 aa29.86■■■□□ 2.37
SNCB-202ENST00000393693 PLXNC1O60486 1568 aa29.86■■■□□ 2.37
SNCB-202ENST00000393693 MROH2AA6NES4 1674 aa29.85■■■□□ 2.37
SNCB-202ENST00000393693 TIAM1Q13009 1591 aa29.85■■■□□ 2.37
SNCB-202ENST00000393693 CLTCQ00610 1675 aaKnown RBP29.82■■■□□ 2.36
SNCB-202ENST00000393693 CAMSAP1Q5T5Y3 1602 aa29.81■■■□□ 2.36
SNCB-202ENST00000393693 EHBP1L1Q8N3D4 1523 aa29.81■■■□□ 2.36
SNCB-202ENST00000393693 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
SNCB-202ENST00000393693 NCKAP5LQ9HCH0 1330 aa29.79■■■□□ 2.36
SNCB-202ENST00000393693 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
SNCB-202ENST00000393693 LTBP4Q8N2S1 1624 aa29.78■■■□□ 2.36
SNCB-202ENST00000393693 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
SNCB-202ENST00000393693 ADGBQ8N7X0 1667 aa29.72■■■□□ 2.35
SNCB-202ENST00000393693 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 RTEL1-TNFRSF6BF6WH68 1400 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 DHX29Q7Z478 1369 aaKnown RBP29.69■■■□□ 2.34
SNCB-202ENST00000393693 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
SNCB-202ENST00000393693 ZNF335Q9H4Z2 1342 aaPredicted RBP29.67■■■□□ 2.34
SNCB-202ENST00000393693 CEP170BQ9Y4F5 1589 aaPredicted RBP29.66■■■□□ 2.34
SNCB-202ENST00000393693 ZNF142P52746 1687 aaPredicted RBP29.65■■■□□ 2.34
SNCB-202ENST00000393693 KIF3BO15066 747 aa29.64■■■□□ 2.34
SNCB-202ENST00000393693 PKD2Q13563 968 aa29.64■■■□□ 2.34
SNCB-202ENST00000393693 CAMSAP2Q08AD1 1489 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 PLA2R1Q13018 1463 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 CCDC141Q6ZP82 1450 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 DISP3Q9P2K9 1392 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 TCOF1Q13428 1488 aaKnown RBP29.61■■■□□ 2.33
SNCB-202ENST00000393693 FBXO31Q5XUX0 539 aaPredicted RBP29.61■■■□□ 2.33
SNCB-202ENST00000393693 IQSEC2Q5JU85 1478 aa29.61■■■□□ 2.33
SNCB-202ENST00000393693 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
SNCB-202ENST00000393693 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms