RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 LMTK3Q96Q04 1460 aa30.64■■■□□ 2.5
SNCB-202ENST00000393693 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
SNCB-202ENST00000393693 MLECQ14165 292 aa30.64■■■□□ 2.5
SNCB-202ENST00000393693 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
SNCB-202ENST00000393693 MAGI2Q86UL8 1455 aa30.63■■■□□ 2.49
SNCB-202ENST00000393693 EFCAB2Q5VUJ9 269 aa30.6■■■□□ 2.49
SNCB-202ENST00000393693 CDK11AQ9UQ88 783 aaPredicted RBP30.6■■■□□ 2.49
SNCB-202ENST00000393693 KIF14Q15058 1648 aa30.58■■■□□ 2.49
SNCB-202ENST00000393693 HSPA2P54652 639 aa30.56■■■□□ 2.48
SNCB-202ENST00000393693 FBXO41Q8TF61 875 aa30.55■■■□□ 2.48
SNCB-202ENST00000393693 TROQ12816 1431 aaPredicted RBP30.54■■■□□ 2.48
SNCB-202ENST00000393693 MYO5CQ9NQX4 1742 aa30.53■■■□□ 2.48
SNCB-202ENST00000393693 ATP10AO60312 1499 aa30.5■■■□□ 2.47
SNCB-202ENST00000393693 LRRIQ1Q96JM4 1722 aa30.48■■■□□ 2.47
SNCB-202ENST00000393693 AFAP1Q8N556 730 aa30.48■■■□□ 2.47
SNCB-202ENST00000393693 ARHGAP5Q13017 1502 aa30.47■■■□□ 2.47
SNCB-202ENST00000393693 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
SNCB-202ENST00000393693 CLIP1P30622 1438 aa30.46■■■□□ 2.47
SNCB-202ENST00000393693 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
SNCB-202ENST00000393693 ZNF518AQ6AHZ1 1483 aa30.42■■■□□ 2.46
SNCB-202ENST00000393693 ARHGEF12Q9NZN5 1544 aa30.42■■■□□ 2.46
SNCB-202ENST00000393693 MYT1LQ9UL68 1186 aa30.41■■■□□ 2.46
SNCB-202ENST00000393693 CEBPAP49715 358 aaPredicted RBP30.4■■■□□ 2.46
SNCB-202ENST00000393693 CASKIN1Q8WXD9 1431 aa30.37■■■□□ 2.45
SNCB-202ENST00000393693 KDM5CP41229 1560 aa30.37■■■□□ 2.45
SNCB-202ENST00000393693 CDC42BPBQ9Y5S2 1711 aa30.34■■■□□ 2.45
SNCB-202ENST00000393693 DIP2CQ9Y2E4 1556 aa30.31■■■□□ 2.44
SNCB-202ENST00000393693 CCDC18Q5T9S5 1454 aa30.31■■■□□ 2.44
SNCB-202ENST00000393693 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
SNCB-202ENST00000393693 MLH3Q9UHC1 1453 aa30.27■■■□□ 2.44
SNCB-202ENST00000393693 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
SNCB-202ENST00000393693 ABCC1P33527 1531 aa30.26■■■□□ 2.43
SNCB-202ENST00000393693 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
SNCB-202ENST00000393693 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
SNCB-202ENST00000393693 REREQ9P2R6 1566 aa30.21■■■□□ 2.43
SNCB-202ENST00000393693 CERKQ8TCT0 537 aa30.2■■■□□ 2.43
SNCB-202ENST00000393693 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
SNCB-202ENST00000393693 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
SNCB-202ENST00000393693 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
SNCB-202ENST00000393693 CDC42BPAQ5VT25 1732 aa30.18■■■□□ 2.42
SNCB-202ENST00000393693 AGLP35573 1532 aa30.15■■■□□ 2.42
SNCB-202ENST00000393693 UHRF1BP1Q6BDS2 1440 aa30.14■■■□□ 2.42
SNCB-202ENST00000393693 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
SNCB-202ENST00000393693 ESF1Q9H501 851 aaKnown RBP30.13■■■□□ 2.41
SNCB-202ENST00000393693 GPATCH8Q9UKJ3 1502 aaKnown RBP30.12■■■□□ 2.41
SNCB-202ENST00000393693 HNRNPMP52272 730 aaKnown RBP eCLIP30.11■■■□□ 2.41
SNCB-202ENST00000393693 SAMD9LQ8IVG5 1584 aa30.1■■■□□ 2.41
SNCB-202ENST00000393693 C3P01024 1663 aa30.09■■■□□ 2.41
SNCB-202ENST00000393693 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
SNCB-202ENST00000393693 SYCP2Q9BX26 1530 aa30.06■■■□□ 2.4
SNCB-202ENST00000393693 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
SNCB-202ENST00000393693 DMRT2Q9Y5R5 561 aa30.05■■■□□ 2.4
SNCB-202ENST00000393693 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
SNCB-202ENST00000393693 CFDP1Q9UEE9 299 aaPredicted RBP30.03■■■□□ 2.4
SNCB-202ENST00000393693 CCNB3Q8WWL7 1395 aa30■■■□□ 2.39
SNCB-202ENST00000393693 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
SNCB-202ENST00000393693 MTUS2Q5JR59 1369 aa29.97■■■□□ 2.39
SNCB-202ENST00000393693 KIAA1107Q9UPP5 1409 aa29.96■■■□□ 2.39
SNCB-202ENST00000393693 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
SNCB-202ENST00000393693 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
SNCB-202ENST00000393693 ZMYM3Q14202 1370 aa29.93■■■□□ 2.38
SNCB-202ENST00000393693 PLEKHH2Q8IVE3 1493 aa29.93■■■□□ 2.38
SNCB-202ENST00000393693 PTPRTO14522 1441 aa29.92■■■□□ 2.38
SNCB-202ENST00000393693 ZNF644Q9H582 1327 aaPredicted RBP29.92■■■□□ 2.38
SNCB-202ENST00000393693 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
SNCB-202ENST00000393693 A2MP01023 1474 aa29.89■■■□□ 2.38
SNCB-202ENST00000393693 GGT6Q6P531 493 aa29.87■■■□□ 2.37
SNCB-202ENST00000393693 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
SNCB-202ENST00000393693 NPATQ14207 1427 aa29.86■■■□□ 2.37
SNCB-202ENST00000393693 PLXNC1O60486 1568 aa29.86■■■□□ 2.37
SNCB-202ENST00000393693 MROH2AA6NES4 1674 aa29.85■■■□□ 2.37
SNCB-202ENST00000393693 TIAM1Q13009 1591 aa29.85■■■□□ 2.37
SNCB-202ENST00000393693 CLTCQ00610 1675 aaKnown RBP29.82■■■□□ 2.36
SNCB-202ENST00000393693 CAMSAP1Q5T5Y3 1602 aa29.81■■■□□ 2.36
SNCB-202ENST00000393693 EHBP1L1Q8N3D4 1523 aa29.81■■■□□ 2.36
SNCB-202ENST00000393693 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
SNCB-202ENST00000393693 NCKAP5LQ9HCH0 1330 aa29.79■■■□□ 2.36
SNCB-202ENST00000393693 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
SNCB-202ENST00000393693 LTBP4Q8N2S1 1624 aa29.78■■■□□ 2.36
SNCB-202ENST00000393693 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
SNCB-202ENST00000393693 ADGBQ8N7X0 1667 aa29.72■■■□□ 2.35
SNCB-202ENST00000393693 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 MYO3AQ8NEV4 1616 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 RTEL1-TNFRSF6BF6WH68 1400 aa29.71■■■□□ 2.35
SNCB-202ENST00000393693 DHX29Q7Z478 1369 aaKnown RBP29.69■■■□□ 2.34
SNCB-202ENST00000393693 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
SNCB-202ENST00000393693 ZNF335Q9H4Z2 1342 aaPredicted RBP29.67■■■□□ 2.34
SNCB-202ENST00000393693 CEP170BQ9Y4F5 1589 aaPredicted RBP29.66■■■□□ 2.34
SNCB-202ENST00000393693 ZNF142P52746 1687 aaPredicted RBP29.65■■■□□ 2.34
SNCB-202ENST00000393693 KIF3BO15066 747 aa29.64■■■□□ 2.34
SNCB-202ENST00000393693 PKD2Q13563 968 aa29.64■■■□□ 2.34
SNCB-202ENST00000393693 CAMSAP2Q08AD1 1489 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 PLA2R1Q13018 1463 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 CCDC141Q6ZP82 1450 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 DISP3Q9P2K9 1392 aa29.63■■■□□ 2.33
SNCB-202ENST00000393693 TCOF1Q13428 1488 aaKnown RBP29.61■■■□□ 2.33
SNCB-202ENST00000393693 FBXO31Q5XUX0 539 aaPredicted RBP29.61■■■□□ 2.33
SNCB-202ENST00000393693 IQSEC2Q5JU85 1478 aa29.61■■■□□ 2.33
SNCB-202ENST00000393693 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
SNCB-202ENST00000393693 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms