RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 CCNB3Q8WWL7 1395 aa29.44■■■□□ 2.3
NME1-203ENST00000393196 ADGRL1O94910 1474 aa29.43■■■□□ 2.3
NME1-203ENST00000393196 PREX2Q70Z35 1606 aa29.41■■■□□ 2.3
NME1-203ENST00000393196 LRRC9Q6ZRR7 1453 aa29.4■■■□□ 2.3
NME1-203ENST00000393196 SCAPERQ9BY12 1400 aa29.39■■■□□ 2.3
NME1-203ENST00000393196 RAPGEF3O95398 923 aa29.39■■■□□ 2.3
NME1-203ENST00000393196 GPATCH8Q9UKJ3 1502 aaKnown RBP29.38■■■□□ 2.29
NME1-203ENST00000393196 CFDP1Q9UEE9 299 aaPredicted RBP29.35■■■□□ 2.29
NME1-203ENST00000393196 POGZQ7Z3K3 1410 aa29.35■■■□□ 2.29
NME1-203ENST00000393196 NCOA2Q15596 1464 aa29.33■■■□□ 2.29
NME1-203ENST00000393196 SUPT6HQ7KZ85 1726 aaKnown RBP29.33■■■□□ 2.29
NME1-203ENST00000393196 MAGI2Q86UL8 1455 aa29.31■■■□□ 2.28
NME1-203ENST00000393196 PLEKHH2Q8IVE3 1493 aa29.31■■■□□ 2.28
NME1-203ENST00000393196 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
NME1-203ENST00000393196 CDC42BPAQ5VT25 1732 aa29.3■■■□□ 2.28
NME1-203ENST00000393196 CDC42BPBQ9Y5S2 1711 aa29.3■■■□□ 2.28
NME1-203ENST00000393196 FRMPD1Q5SYB0 1578 aa29.3■■■□□ 2.28
NME1-203ENST00000393196 ZMYM4Q5VZL5 1548 aa29.29■■■□□ 2.28
NME1-203ENST00000393196 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
NME1-203ENST00000393196 ITSN2Q9NZM3 1697 aa29.27■■■□□ 2.28
NME1-203ENST00000393196 ABCC1P33527 1531 aa29.26■■■□□ 2.27
NME1-203ENST00000393196 ZNF777Q9ULD5 760 aaPredicted RBP29.26■■■□□ 2.27
NME1-203ENST00000393196 KIAA1107Q9UPP5 1409 aa29.26■■■□□ 2.27
NME1-203ENST00000393196 KANK4Q5T7N3 995 aaPredicted RBP29.24■■■□□ 2.27
NME1-203ENST00000393196 ARHGEF40Q8TER5 1519 aa29.2■■■□□ 2.26
NME1-203ENST00000393196 ZFYVE16Q7Z3T8 1539 aa29.19■■■□□ 2.26
NME1-203ENST00000393196 SAMD9LQ8IVG5 1584 aa29.18■■■□□ 2.26
NME1-203ENST00000393196 KDM5CP41229 1560 aa29.18■■■□□ 2.26
NME1-203ENST00000393196 AFAP1Q8N556 730 aa29.17■■■□□ 2.26
NME1-203ENST00000393196 ARHGEF12Q9NZN5 1544 aa29.15■■■□□ 2.26
NME1-203ENST00000393196 TRAPPC8Q9Y2L5 1435 aa29.14■■■□□ 2.26
NME1-203ENST00000393196 MLH3Q9UHC1 1453 aa29.14■■■□□ 2.26
NME1-203ENST00000393196 SYCP2Q9BX26 1530 aa29.14■■■□□ 2.25
NME1-203ENST00000393196 MYOM3Q5VTT5 1437 aa29.13■■■□□ 2.25
NME1-203ENST00000393196 MIA2Q96PC5 1412 aa29.13■■■□□ 2.25
NME1-203ENST00000393196 RSPH4AQ5TD94 716 aa29.12■■■□□ 2.25
NME1-203ENST00000393196 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
NME1-203ENST00000393196 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
NME1-203ENST00000393196 HECW2Q9P2P5 1572 aa29.09■■■□□ 2.25
NME1-203ENST00000393196 YEATS2Q9ULM3 1422 aa29.09■■■□□ 2.25
NME1-203ENST00000393196 SPAG9O60271 1321 aaKnown RBP29.08■■■□□ 2.25
NME1-203ENST00000393196 ATP10AO60312 1499 aa29.08■■■□□ 2.25
NME1-203ENST00000393196 ZNF644Q9H582 1327 aaPredicted RBP29.07■■■□□ 2.24
NME1-203ENST00000393196 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
NME1-203ENST00000393196 C9orf84Q5VXU9 1444 aa29.05■■■□□ 2.24
NME1-203ENST00000393196 ARID4BQ4LE39 1312 aaPredicted RBP29.05■■■□□ 2.24
NME1-203ENST00000393196 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
NME1-203ENST00000393196 KDM4FA0A1W2PPD8 638 aa29.02■■■□□ 2.24
NME1-203ENST00000393196 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
NME1-203ENST00000393196 REREQ9P2R6 1566 aa28.97■■■□□ 2.23
NME1-203ENST00000393196 RTEL1-TNFRSF6BF6WH68 1400 aa28.97■■■□□ 2.23
NME1-203ENST00000393196 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
NME1-203ENST00000393196 DIP2CQ9Y2E4 1556 aa28.96■■■□□ 2.23
NME1-203ENST00000393196 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.23
NME1-203ENST00000393196 ATP7AQ04656 1500 aa28.95■■■□□ 2.23
NME1-203ENST00000393196 TSPY4P0CV99 314 aa28.95■■■□□ 2.22
NME1-203ENST00000393196 TSPY10P0CW01 314 aa28.95■■■□□ 2.22
NME1-203ENST00000393196 INO80Q9ULG1 1556 aaPredicted RBP28.92■■■□□ 2.22
NME1-203ENST00000393196 KIDINS220Q9ULH0 1771 aa28.91■■■□□ 2.22
NME1-203ENST00000393196 ABCA6Q8N139 1617 aa28.91■■■□□ 2.22
NME1-203ENST00000393196 AGLP35573 1532 aa28.89■■■□□ 2.21
NME1-203ENST00000393196 TCOF1Q13428 1488 aaKnown RBP28.88■■■□□ 2.21
NME1-203ENST00000393196 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
NME1-203ENST00000393196 BCORL1Q5H9F3 1711 aa28.86■■■□□ 2.21
NME1-203ENST00000393196 A2MP01023 1474 aa28.84■■■□□ 2.21
NME1-203ENST00000393196 ADAMTSL3P82987 1691 aa28.83■■■□□ 2.21
NME1-203ENST00000393196 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
NME1-203ENST00000393196 SHANK2Q9UPX8 1470 aa28.79■■■□□ 2.2
NME1-203ENST00000393196 MLECQ14165 292 aa28.78■■■□□ 2.2
NME1-203ENST00000393196 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
NME1-203ENST00000393196 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
NME1-203ENST00000393196 PLXNC1O60486 1568 aa28.76■■■□□ 2.19
NME1-203ENST00000393196 ABCC5O15440 1437 aa28.76■■■□□ 2.19
NME1-203ENST00000393196 FAM50AQ14320 339 aaKnown RBP28.75■■■□□ 2.19
NME1-203ENST00000393196 DAPK1P53355 1430 aa28.75■■■□□ 2.19
NME1-203ENST00000393196 SIGLEC1Q9BZZ2 1709 aa28.74■■■□□ 2.19
NME1-203ENST00000393196 ESF1Q9H501 851 aaKnown RBP28.74■■■□□ 2.19
NME1-203ENST00000393196 PTPRMP28827 1452 aa28.73■■■□□ 2.19
NME1-203ENST00000393196 MADDQ8WXG6 1647 aa28.72■■■□□ 2.19
NME1-203ENST00000393196 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
NME1-203ENST00000393196 PPP6R1Q9UPN7 881 aa28.71■■■□□ 2.19
NME1-203ENST00000393196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.71■■■□□ 2.195e-11■■■■■ 54.8
NME1-203ENST00000393196 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.18
NME1-203ENST00000393196 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
NME1-203ENST00000393196 ANKRD30AQ9BXX3 1397 aa28.66■■■□□ 2.18
NME1-203ENST00000393196 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
NME1-203ENST00000393196 KIF15Q9NS87 1388 aa28.63■■■□□ 2.17
NME1-203ENST00000393196 FER1L4A9Z1Z3 1794 aa28.63■■■□□ 2.17
NME1-203ENST00000393196 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
NME1-203ENST00000393196 RIMS1Q86UR5 1692 aaKnown RBP28.62■■■□□ 2.17
NME1-203ENST00000393196 KIF3BO15066 747 aa28.62■■■□□ 2.17
NME1-203ENST00000393196 GGT6Q6P531 493 aa28.6■■■□□ 2.17
NME1-203ENST00000393196 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
NME1-203ENST00000393196 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
NME1-203ENST00000393196 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
NME1-203ENST00000393196 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
NME1-203ENST00000393196 NCOA1Q15788 1441 aa28.56■■■□□ 2.16
NME1-203ENST00000393196 RRP7BPQ9NSQ0 103 aa28.56■■■□□ 2.16
NME1-203ENST00000393196 CHIC2Q9UKJ5 165 aa28.56■■■□□ 2.16
NME1-203ENST00000393196 EIF2AK4Q9P2K8 1649 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms