RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
USP44-202ENST00000393091 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
USP44-202ENST00000393091 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.92
USP44-202ENST00000393091 CROCC2H7BZ55 1655 aa20.76■□□□□ 0.91
USP44-202ENST00000393091 APLP2Q06481 763 aa20.76■□□□□ 0.91
USP44-202ENST00000393091 ATP1B4Q9UN42 357 aaPredicted RBP20.75■□□□□ 0.91
USP44-202ENST00000393091 PTPN23Q9H3S7 1636 aa20.75■□□□□ 0.91
USP44-202ENST00000393091 ZMYM4Q5VZL5 1548 aa20.74■□□□□ 0.91
USP44-202ENST00000393091 FANCAO15360 1455 aa20.74■□□□□ 0.91
USP44-202ENST00000393091 KDM5CP41229 1560 aa20.73■□□□□ 0.91
USP44-202ENST00000393091 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
USP44-202ENST00000393091 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
USP44-202ENST00000393091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
USP44-202ENST00000393091 FAM69CQ0P6D2 419 aa20.73■□□□□ 0.91
USP44-202ENST00000393091 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
USP44-202ENST00000393091 RRBP1Q9P2E9 1410 aaKnown RBP20.73■□□□□ 0.91
USP44-202ENST00000393091 MAST1Q9Y2H9 1570 aa20.73■□□□□ 0.91
USP44-202ENST00000393091 ARHGAP5Q13017 1502 aa20.72■□□□□ 0.91
USP44-202ENST00000393091 ARID3CA6NKF2 412 aa20.71■□□□□ 0.91
USP44-202ENST00000393091 FGD6Q6ZV73 1430 aa20.7■□□□□ 0.9
USP44-202ENST00000393091 DNMT1P26358 1616 aaKnown RBP20.69■□□□□ 0.9
USP44-202ENST00000393091 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
USP44-202ENST00000393091 CAMSAP2Q08AD1 1489 aa20.68■□□□□ 0.9
USP44-202ENST00000393091 MBD5Q9P267 1494 aa20.67■□□□□ 0.9
USP44-202ENST00000393091 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
USP44-202ENST00000393091 SHANK2Q9UPX8 1470 aa20.65■□□□□ 0.9
USP44-202ENST00000393091 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
USP44-202ENST00000393091 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.89
USP44-202ENST00000393091 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
USP44-202ENST00000393091 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
USP44-202ENST00000393091 ADGBQ8N7X0 1667 aa20.62■□□□□ 0.89
USP44-202ENST00000393091 REREQ9P2R6 1566 aa20.62■□□□□ 0.89
USP44-202ENST00000393091 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
USP44-202ENST00000393091 KDM6BO15054 1643 aa20.62■□□□□ 0.89
USP44-202ENST00000393091 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
USP44-202ENST00000393091 SYCP2Q9BX26 1530 aa20.61■□□□□ 0.89
USP44-202ENST00000393091 PLXNC1O60486 1568 aa20.61■□□□□ 0.89
USP44-202ENST00000393091 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
USP44-202ENST00000393091 ZNF518AQ6AHZ1 1483 aa20.6■□□□□ 0.89
USP44-202ENST00000393091 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
USP44-202ENST00000393091 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.89
USP44-202ENST00000393091 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
USP44-202ENST00000393091 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.89
USP44-202ENST00000393091 RSPH4AQ5TD94 716 aa20.57■□□□□ 0.88
USP44-202ENST00000393091 KIDINS220Q9ULH0 1771 aa20.57■□□□□ 0.88
USP44-202ENST00000393091 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
USP44-202ENST00000393091 ADGRL2O95490 1459 aa20.56■□□□□ 0.88
USP44-202ENST00000393091 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
USP44-202ENST00000393091 ZFYVE16Q7Z3T8 1539 aa20.55■□□□□ 0.88
USP44-202ENST00000393091 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
USP44-202ENST00000393091 ARHGEF40Q8TER5 1519 aa20.54■□□□□ 0.88
USP44-202ENST00000393091 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
USP44-202ENST00000393091 DAPK1P53355 1430 aa20.51■□□□□ 0.87
USP44-202ENST00000393091 TRAPPC8Q9Y2L5 1435 aa20.5■□□□□ 0.87
USP44-202ENST00000393091 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
USP44-202ENST00000393091 ABCC5O15440 1437 aa20.49■□□□□ 0.87
USP44-202ENST00000393091 ATP7AQ04656 1500 aa20.49■□□□□ 0.87
USP44-202ENST00000393091 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
USP44-202ENST00000393091 EIF2AK4Q9P2K8 1649 aaKnown RBP20.48■□□□□ 0.87
USP44-202ENST00000393091 DIP2CQ9Y2E4 1556 aa20.48■□□□□ 0.87
USP44-202ENST00000393091 GCC2Q8IWJ2 1684 aa20.47■□□□□ 0.87
USP44-202ENST00000393091 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
USP44-202ENST00000393091 AGLP35573 1532 aa20.44■□□□□ 0.86
USP44-202ENST00000393091 ZNF644Q9H582 1327 aaPredicted RBP20.42■□□□□ 0.86
USP44-202ENST00000393091 FAM135AQ9P2D6 1515 aa20.41■□□□□ 0.86
USP44-202ENST00000393091 DEPDC5O75140 1603 aa20.4■□□□□ 0.86
USP44-202ENST00000393091 C9orf84Q5VXU9 1444 aa20.39■□□□□ 0.86
USP44-202ENST00000393091 RNF17Q9BXT8 1623 aaKnown RBP20.39■□□□□ 0.85
USP44-202ENST00000393091 DUOX2Q9NRD8 1548 aa20.39■□□□□ 0.85
USP44-202ENST00000393091 SIGLEC1Q9BZZ2 1709 aa20.38■□□□□ 0.85
USP44-202ENST00000393091 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
USP44-202ENST00000393091 ATP10AO60312 1499 aa20.36■□□□□ 0.85
USP44-202ENST00000393091 NCOA1Q15788 1441 aa20.35■□□□□ 0.85
USP44-202ENST00000393091 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
USP44-202ENST00000393091 HNRNPMP52272 730 aaKnown RBP eCLIP20.34■□□□□ 0.85
USP44-202ENST00000393091 UNC13BO14795 1591 aa20.32■□□□□ 0.84
USP44-202ENST00000393091 HFM1A2PYH4 1435 aa20.3■□□□□ 0.84
USP44-202ENST00000393091 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
USP44-202ENST00000393091 SPAG9O60271 1321 aaKnown RBP20.29■□□□□ 0.84
USP44-202ENST00000393091 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
USP44-202ENST00000393091 A2MP01023 1474 aa20.29■□□□□ 0.84
USP44-202ENST00000393091 VWDEQ8N2E2 1590 aa20.29■□□□□ 0.84
USP44-202ENST00000393091 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
USP44-202ENST00000393091 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
USP44-202ENST00000393091 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
USP44-202ENST00000393091 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
USP44-202ENST00000393091 RAPGEF3O95398 923 aa20.28■□□□□ 0.84
USP44-202ENST00000393091 KDM5DQ9BY66 1539 aa20.28■□□□□ 0.84
USP44-202ENST00000393091 DHX29Q7Z478 1369 aaKnown RBP20.27■□□□□ 0.84
USP44-202ENST00000393091 PRDM15P57071 1507 aaPredicted RBP20.26■□□□□ 0.83
USP44-202ENST00000393091 MROH2AA6NES4 1674 aa20.26■□□□□ 0.83
USP44-202ENST00000393091 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
USP44-202ENST00000393091 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
USP44-202ENST00000393091 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
USP44-202ENST00000393091 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
USP44-202ENST00000393091 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
USP44-202ENST00000393091 NAIPQ13075 1403 aa20.23■□□□□ 0.83
USP44-202ENST00000393091 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
USP44-202ENST00000393091 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
USP44-202ENST00000393091 KIF15Q9NS87 1388 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms