RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
PTN-202ENST00000393083 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
PTN-202ENST00000393083 EFCAB2Q5VUJ9 269 aa20.94■□□□□ 0.94
PTN-202ENST00000393083 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
PTN-202ENST00000393083 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
PTN-202ENST00000393083 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 CDC42BPAQ5VT25 1732 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 CDC42BPBQ9Y5S2 1711 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 NCOA2Q15596 1464 aa20.92■□□□□ 0.94
PTN-202ENST00000393083 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
PTN-202ENST00000393083 SUPT6HQ7KZ85 1726 aaKnown RBP20.9■□□□□ 0.94
PTN-202ENST00000393083 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
PTN-202ENST00000393083 ADGRL1O94910 1474 aa20.87■□□□□ 0.93
PTN-202ENST00000393083 SCAPERQ9BY12 1400 aa20.85■□□□□ 0.93
PTN-202ENST00000393083 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
PTN-202ENST00000393083 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
PTN-202ENST00000393083 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.93
PTN-202ENST00000393083 ITSN2Q9NZM3 1697 aa20.81■□□□□ 0.92
PTN-202ENST00000393083 SAMD9LQ8IVG5 1584 aa20.81■□□□□ 0.92
PTN-202ENST00000393083 ARHGEF12Q9NZN5 1544 aa20.81■□□□□ 0.92
PTN-202ENST00000393083 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
PTN-202ENST00000393083 RICTORQ6R327 1708 aa20.8■□□□□ 0.92
PTN-202ENST00000393083 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
PTN-202ENST00000393083 ABCC1P33527 1531 aa20.8■□□□□ 0.92
PTN-202ENST00000393083 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
PTN-202ENST00000393083 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.91
PTN-202ENST00000393083 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
PTN-202ENST00000393083 TRAPPC8Q9Y2L5 1435 aa20.76■□□□□ 0.91
PTN-202ENST00000393083 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
PTN-202ENST00000393083 ZMYM4Q5VZL5 1548 aa20.75■□□□□ 0.91
PTN-202ENST00000393083 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
PTN-202ENST00000393083 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
PTN-202ENST00000393083 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTN-202ENST00000393083 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
PTN-202ENST00000393083 MIA2Q96PC5 1412 aa20.73■□□□□ 0.91
PTN-202ENST00000393083 KDM5CP41229 1560 aa20.72■□□□□ 0.91
PTN-202ENST00000393083 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
PTN-202ENST00000393083 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
PTN-202ENST00000393083 MAGI2Q86UL8 1455 aa20.71■□□□□ 0.91
PTN-202ENST00000393083 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
PTN-202ENST00000393083 FGD6Q6ZV73 1430 aa20.66■□□□□ 0.9
PTN-202ENST00000393083 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
PTN-202ENST00000393083 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
PTN-202ENST00000393083 ARHGEF40Q8TER5 1519 aa20.66■□□□□ 0.9
PTN-202ENST00000393083 HECW2Q9P2P5 1572 aa20.64■□□□□ 0.89
PTN-202ENST00000393083 RSPH4AQ5TD94 716 aa20.63■□□□□ 0.89
PTN-202ENST00000393083 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
PTN-202ENST00000393083 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
PTN-202ENST00000393083 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
PTN-202ENST00000393083 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
PTN-202ENST00000393083 SPAG9O60271 1321 aaKnown RBP20.61■□□□□ 0.89
PTN-202ENST00000393083 CCDC141Q6ZP82 1450 aa20.6■□□□□ 0.89
PTN-202ENST00000393083 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
PTN-202ENST00000393083 ATP10AO60312 1499 aa20.59■□□□□ 0.89
PTN-202ENST00000393083 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
PTN-202ENST00000393083 INO80Q9ULG1 1556 aaPredicted RBP20.58■□□□□ 0.88
PTN-202ENST00000393083 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
PTN-202ENST00000393083 ATP7AQ04656 1500 aa20.57■□□□□ 0.88
PTN-202ENST00000393083 ABCA6Q8N139 1617 aa20.57■□□□□ 0.88
PTN-202ENST00000393083 RTEL1-TNFRSF6BF6WH68 1400 aa20.56■□□□□ 0.88
PTN-202ENST00000393083 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
PTN-202ENST00000393083 SIGLEC1Q9BZZ2 1709 aa20.54■□□□□ 0.88
PTN-202ENST00000393083 ABCC5O15440 1437 aa20.53■□□□□ 0.88
PTN-202ENST00000393083 KDM4FA0A1W2PPD8 638 aa20.53■□□□□ 0.88
PTN-202ENST00000393083 REREQ9P2R6 1566 aa20.52■□□□□ 0.88
PTN-202ENST00000393083 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
PTN-202ENST00000393083 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
PTN-202ENST00000393083 DAPK1P53355 1430 aa20.51■□□□□ 0.87
PTN-202ENST00000393083 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
PTN-202ENST00000393083 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
PTN-202ENST00000393083 DNMT1P26358 1616 aaKnown RBP20.5■□□□□ 0.87
PTN-202ENST00000393083 ARID4BQ4LE39 1312 aaPredicted RBP20.49■□□□□ 0.87
PTN-202ENST00000393083 SHANK2Q9UPX8 1470 aa20.47■□□□□ 0.87
PTN-202ENST00000393083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.47■□□□□ 0.87
PTN-202ENST00000393083 A2MP01023 1474 aa20.46■□□□□ 0.87
PTN-202ENST00000393083 AGLP35573 1532 aa20.46■□□□□ 0.87
PTN-202ENST00000393083 CROCC2H7BZ55 1655 aa20.46■□□□□ 0.87
PTN-202ENST00000393083 PLXNC1O60486 1568 aa20.45■□□□□ 0.86
PTN-202ENST00000393083 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
PTN-202ENST00000393083 ADGBQ8N7X0 1667 aa20.43■□□□□ 0.86
PTN-202ENST00000393083 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
PTN-202ENST00000393083 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
PTN-202ENST00000393083 PTPRKQ15262 1439 aa20.41■□□□□ 0.86
PTN-202ENST00000393083 MLECQ14165 292 aa20.4■□□□□ 0.86
PTN-202ENST00000393083 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
PTN-202ENST00000393083 ADGRL2O95490 1459 aa20.38■□□□□ 0.85
PTN-202ENST00000393083 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
PTN-202ENST00000393083 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
PTN-202ENST00000393083 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
PTN-202ENST00000393083 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
PTN-202ENST00000393083 MADDQ8WXG6 1647 aa20.35■□□□□ 0.85
PTN-202ENST00000393083 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
PTN-202ENST00000393083 ITGAEP38570 1179 aa20.33■□□□□ 0.84
PTN-202ENST00000393083 KIF3BO15066 747 aa20.32■□□□□ 0.84
PTN-202ENST00000393083 ROCK1Q13464 1354 aa20.31■□□□□ 0.84
PTN-202ENST00000393083 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
PTN-202ENST00000393083 GGT6Q6P531 493 aa20.29■□□□□ 0.84
PTN-202ENST00000393083 PTPRMP28827 1452 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms