RNA–Protein interactions for RNA: ENST00000392710.8

PRKAR1A-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 3,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-202ENST00000392710 SHANK2Q9UPX8 1470 aa10.62□□□□□ -0.71
PRKAR1A-202ENST00000392710 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
PRKAR1A-202ENST00000392710 ABCC5O15440 1437 aa10.62□□□□□ -0.71
PRKAR1A-202ENST00000392710 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
PRKAR1A-202ENST00000392710 KDM6BO15054 1643 aa10.61□□□□□ -0.71
PRKAR1A-202ENST00000392710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.6□□□□□ -0.714e-7■■■■□ 24.6
PRKAR1A-202ENST00000392710 ARAP3Q8WWN8 1544 aa10.6□□□□□ -0.71
PRKAR1A-202ENST00000392710 DENND4BO75064 1496 aaPredicted RBP10.6□□□□□ -0.71
PRKAR1A-202ENST00000392710 TTC37Q6PGP7 1564 aa10.6□□□□□ -0.71
PRKAR1A-202ENST00000392710 MAST1Q9Y2H9 1570 aa10.6□□□□□ -0.71
PRKAR1A-202ENST00000392710 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
PRKAR1A-202ENST00000392710 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
PRKAR1A-202ENST00000392710 MBD5Q9P267 1494 aa10.57□□□□□ -0.72
PRKAR1A-202ENST00000392710 FAM50AQ14320 339 aaKnown RBP10.57□□□□□ -0.72
PRKAR1A-202ENST00000392710 ACIN1Q9UKV3 1341 aaKnown RBP10.56□□□□□ -0.72
PRKAR1A-202ENST00000392710 KDM5DQ9BY66 1539 aa10.54□□□□□ -0.72
PRKAR1A-202ENST00000392710 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
PRKAR1A-202ENST00000392710 NCOA1Q15788 1441 aa10.53□□□□□ -0.72
PRKAR1A-202ENST00000392710 PLXNC1O60486 1568 aa10.53□□□□□ -0.72
PRKAR1A-202ENST00000392710 KIAA1107Q9UPP5 1409 aa10.52□□□□□ -0.72
PRKAR1A-202ENST00000392710 PLEKHD1A6NEE1 506 aa10.52□□□□□ -0.73
PRKAR1A-202ENST00000392710 TIMELESSQ9UNS1 1208 aa10.51□□□□□ -0.73
PRKAR1A-202ENST00000392710 ZNF644Q9H582 1327 aaPredicted RBP10.5□□□□□ -0.73
PRKAR1A-202ENST00000392710 ABCC1P33527 1531 aa10.5□□□□□ -0.73
PRKAR1A-202ENST00000392710 PLCH2O75038 1416 aa10.5□□□□□ -0.73
PRKAR1A-202ENST00000392710 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
PRKAR1A-202ENST00000392710 WDR7Q9Y4E6 1490 aa10.48□□□□□ -0.73
PRKAR1A-202ENST00000392710 ITGAEP38570 1179 aa10.48□□□□□ -0.73
PRKAR1A-202ENST00000392710 CCDC141Q6ZP82 1450 aa10.48□□□□□ -0.73
PRKAR1A-202ENST00000392710 UNC13BO14795 1591 aa10.48□□□□□ -0.73
PRKAR1A-202ENST00000392710 PZPP20742 1482 aa10.47□□□□□ -0.73
PRKAR1A-202ENST00000392710 CFDP1Q9UEE9 299 aaPredicted RBP10.47□□□□□ -0.73
PRKAR1A-202ENST00000392710 ARID3CA6NKF2 412 aa10.46□□□□□ -0.73
PRKAR1A-202ENST00000392710 C9orf84Q5VXU9 1444 aa10.46□□□□□ -0.73
PRKAR1A-202ENST00000392710 ARHGEF12Q9NZN5 1544 aa10.46□□□□□ -0.73
PRKAR1A-202ENST00000392710 SYCP2Q9BX26 1530 aa10.46□□□□□ -0.73
PRKAR1A-202ENST00000392710 MAGI2Q86UL8 1455 aa10.46□□□□□ -0.74
PRKAR1A-202ENST00000392710 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
PRKAR1A-202ENST00000392710 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
PRKAR1A-202ENST00000392710 ARHGAP5Q13017 1502 aa10.44□□□□□ -0.74
PRKAR1A-202ENST00000392710 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
PRKAR1A-202ENST00000392710 ANKRD30AQ9BXX3 1397 aa10.43□□□□□ -0.74
PRKAR1A-202ENST00000392710 DEPDC5O75140 1603 aa10.42□□□□□ -0.74
PRKAR1A-202ENST00000392710 IQGAP3Q86VI3 1631 aa10.42□□□□□ -0.74
PRKAR1A-202ENST00000392710 RTEL1-TNFRSF6BF6WH68 1400 aa10.41□□□□□ -0.74
PRKAR1A-202ENST00000392710 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
PRKAR1A-202ENST00000392710 ANKRD30BQ9BXX2 1392 aa10.41□□□□□ -0.74
PRKAR1A-202ENST00000392710 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
PRKAR1A-202ENST00000392710 RPRD2Q5VT52 1461 aaKnown RBP10.4□□□□□ -0.74
PRKAR1A-202ENST00000392710 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
PRKAR1A-202ENST00000392710 ASXL2Q76L83 1435 aa10.4□□□□□ -0.74
PRKAR1A-202ENST00000392710 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.74
PRKAR1A-202ENST00000392710 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.74
PRKAR1A-202ENST00000392710 RRP7BPQ9NSQ0 103 aa10.4□□□□□ -0.75
PRKAR1A-202ENST00000392710 BCORL1Q5H9F3 1711 aa10.39□□□□□ -0.75
PRKAR1A-202ENST00000392710 TEX14Q8IWB6 1497 aa10.39□□□□□ -0.75
PRKAR1A-202ENST00000392710 GLI2P10070 1586 aa10.39□□□□□ -0.75
PRKAR1A-202ENST00000392710 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
PRKAR1A-202ENST00000392710 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
PRKAR1A-202ENST00000392710 MAP3K4Q9Y6R4 1608 aa10.38□□□□□ -0.75
PRKAR1A-202ENST00000392710 RIMBP3CA6NJZ7 1639 aa10.38□□□□□ -0.75
PRKAR1A-202ENST00000392710 RIMBP3BA6NNM3 1639 aa10.38□□□□□ -0.75
PRKAR1A-202ENST00000392710 RIMBP3Q9UFD9 1639 aa10.38□□□□□ -0.75
PRKAR1A-202ENST00000392710 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
PRKAR1A-202ENST00000392710 KDM5CP41229 1560 aa10.37□□□□□ -0.75
PRKAR1A-202ENST00000392710 CHIC2Q9UKJ5 165 aa10.37□□□□□ -0.75
PRKAR1A-202ENST00000392710 VWDEQ8N2E2 1590 aa10.37□□□□□ -0.75
PRKAR1A-202ENST00000392710 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
PRKAR1A-202ENST00000392710 PPP1R15AO75807 674 aaPredicted RBP10.36□□□□□ -0.75
PRKAR1A-202ENST00000392710 SIN3AQ96ST3 1273 aa10.35□□□□□ -0.75
PRKAR1A-202ENST00000392710 ATP10AO60312 1499 aa10.35□□□□□ -0.75
PRKAR1A-202ENST00000392710 FAM135AQ9P2D6 1515 aa10.35□□□□□ -0.75
PRKAR1A-202ENST00000392710 FANCAO15360 1455 aa10.35□□□□□ -0.75
PRKAR1A-202ENST00000392710 TRAPPC8Q9Y2L5 1435 aa10.35□□□□□ -0.75
PRKAR1A-202ENST00000392710 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
PRKAR1A-202ENST00000392710 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■□□□ 11.9
PRKAR1A-202ENST00000392710 ATP7AQ04656 1500 aa10.33□□□□□ -0.76
PRKAR1A-202ENST00000392710 MROH1Q8NDA8 1641 aa10.33□□□□□ -0.76
PRKAR1A-202ENST00000392710 EFCAB2Q5VUJ9 269 aa10.32□□□□□ -0.76
PRKAR1A-202ENST00000392710 RNF17Q9BXT8 1623 aaKnown RBP10.32□□□□□ -0.76
PRKAR1A-202ENST00000392710 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
PRKAR1A-202ENST00000392710 POLR1AO95602 1720 aaPredicted RBP10.31□□□□□ -0.76
PRKAR1A-202ENST00000392710 PRDM15P57071 1507 aaPredicted RBP10.31□□□□□ -0.76
PRKAR1A-202ENST00000392710 NEO1Q92859 1461 aa10.31□□□□□ -0.76
PRKAR1A-202ENST00000392710 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
PRKAR1A-202ENST00000392710 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
PRKAR1A-202ENST00000392710 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
PRKAR1A-202ENST00000392710 RICTORQ6R327 1708 aa10.3□□□□□ -0.76
PRKAR1A-202ENST00000392710 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 ADGRL1O94910 1474 aa10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 TET3O43151 1660 aa10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 DIEXFQ68CQ4 756 aaKnown RBP10.29□□□□□ -0.76
PRKAR1A-202ENST00000392710 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
PRKAR1A-202ENST00000392710 LMTK2Q8IWU2 1503 aa10.28□□□□□ -0.76
PRKAR1A-202ENST00000392710 DIP2BQ9P265 1576 aa10.28□□□□□ -0.76
PRKAR1A-202ENST00000392710 E9PCH4 1651 aa10.28□□□□□ -0.76
PRKAR1A-202ENST00000392710 TONSLQ96HA7 1378 aa10.28□□□□□ -0.76
PRKAR1A-202ENST00000392710 PLA2R1Q13018 1463 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms