RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP2-208ENST00000392556 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
TRAF3IP2-208ENST00000392556 ZFYVE16Q7Z3T8 1539 aa17.64■□□□□ 0.41
TRAF3IP2-208ENST00000392556 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
TRAF3IP2-208ENST00000392556 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
TRAF3IP2-208ENST00000392556 KIF14Q15058 1648 aa17.63■□□□□ 0.41
TRAF3IP2-208ENST00000392556 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
TRAF3IP2-208ENST00000392556 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
TRAF3IP2-208ENST00000392556 CASKIN1Q8WXD9 1431 aa17.6■□□□□ 0.41
TRAF3IP2-208ENST00000392556 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
TRAF3IP2-208ENST00000392556 MADDQ8WXG6 1647 aa17.58■□□□□ 0.41
TRAF3IP2-208ENST00000392556 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
TRAF3IP2-208ENST00000392556 ATP10AO60312 1499 aa17.56■□□□□ 0.4
TRAF3IP2-208ENST00000392556 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
TRAF3IP2-208ENST00000392556 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
TRAF3IP2-208ENST00000392556 C9orf84Q5VXU9 1444 aa17.55■□□□□ 0.4
TRAF3IP2-208ENST00000392556 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
TRAF3IP2-208ENST00000392556 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
TRAF3IP2-208ENST00000392556 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
TRAF3IP2-208ENST00000392556 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
TRAF3IP2-208ENST00000392556 KDM5CP41229 1560 aa17.52■□□□□ 0.39
TRAF3IP2-208ENST00000392556 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
TRAF3IP2-208ENST00000392556 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
TRAF3IP2-208ENST00000392556 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
TRAF3IP2-208ENST00000392556 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
TRAF3IP2-208ENST00000392556 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
TRAF3IP2-208ENST00000392556 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
TRAF3IP2-208ENST00000392556 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
TRAF3IP2-208ENST00000392556 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
TRAF3IP2-208ENST00000392556 ABCC1P33527 1531 aa17.44■□□□□ 0.38
TRAF3IP2-208ENST00000392556 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
TRAF3IP2-208ENST00000392556 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
TRAF3IP2-208ENST00000392556 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
TRAF3IP2-208ENST00000392556 SIGLEC1Q9BZZ2 1709 aa17.43■□□□□ 0.38
TRAF3IP2-208ENST00000392556 AGLP35573 1532 aa17.42■□□□□ 0.38
TRAF3IP2-208ENST00000392556 MLECQ14165 292 aa17.42■□□□□ 0.38
TRAF3IP2-208ENST00000392556 DIP2CQ9Y2E4 1556 aa17.41■□□□□ 0.38
TRAF3IP2-208ENST00000392556 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
TRAF3IP2-208ENST00000392556 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
TRAF3IP2-208ENST00000392556 ITSN2Q9NZM3 1697 aa17.39■□□□□ 0.37
TRAF3IP2-208ENST00000392556 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
TRAF3IP2-208ENST00000392556 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
TRAF3IP2-208ENST00000392556 TRAPPC8Q9Y2L5 1435 aa17.38■□□□□ 0.37
TRAF3IP2-208ENST00000392556 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
TRAF3IP2-208ENST00000392556 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
TRAF3IP2-208ENST00000392556 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
TRAF3IP2-208ENST00000392556 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
TRAF3IP2-208ENST00000392556 ABCA6Q8N139 1617 aa17.35■□□□□ 0.37
TRAF3IP2-208ENST00000392556 PREX1Q8TCU6 1659 aa17.34■□□□□ 0.37
TRAF3IP2-208ENST00000392556 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
TRAF3IP2-208ENST00000392556 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.37
TRAF3IP2-208ENST00000392556 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.37
TRAF3IP2-208ENST00000392556 SAMD9LQ8IVG5 1584 aa17.32■□□□□ 0.36
TRAF3IP2-208ENST00000392556 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
TRAF3IP2-208ENST00000392556 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
TRAF3IP2-208ENST00000392556 KIDINS220Q9ULH0 1771 aa17.31■□□□□ 0.36
TRAF3IP2-208ENST00000392556 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
TRAF3IP2-208ENST00000392556 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
TRAF3IP2-208ENST00000392556 HSPA2P54652 639 aa17.3■□□□□ 0.36
TRAF3IP2-208ENST00000392556 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
TRAF3IP2-208ENST00000392556 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
TRAF3IP2-208ENST00000392556 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
TRAF3IP2-208ENST00000392556 EHBP1L1Q8N3D4 1523 aa17.3■□□□□ 0.36
TRAF3IP2-208ENST00000392556 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
TRAF3IP2-208ENST00000392556 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
TRAF3IP2-208ENST00000392556 CEP162Q5TB80 1403 aa17.27■□□□□ 0.36
TRAF3IP2-208ENST00000392556 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
TRAF3IP2-208ENST00000392556 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
TRAF3IP2-208ENST00000392556 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP2-208ENST00000392556 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
TRAF3IP2-208ENST00000392556 NPATQ14207 1427 aa17.25■□□□□ 0.35
TRAF3IP2-208ENST00000392556 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAF3IP2-208ENST00000392556 INO80Q9ULG1 1556 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP2-208ENST00000392556 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
TRAF3IP2-208ENST00000392556 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
TRAF3IP2-208ENST00000392556 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
TRAF3IP2-208ENST00000392556 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
TRAF3IP2-208ENST00000392556 A2MP01023 1474 aa17.23■□□□□ 0.35
TRAF3IP2-208ENST00000392556 C3P01024 1663 aa17.23■□□□□ 0.35
TRAF3IP2-208ENST00000392556 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
TRAF3IP2-208ENST00000392556 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
TRAF3IP2-208ENST00000392556 BCL11AQ9H165 835 aa17.21■□□□□ 0.34
TRAF3IP2-208ENST00000392556 PTPRTO14522 1441 aa17.2■□□□□ 0.34
TRAF3IP2-208ENST00000392556 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
TRAF3IP2-208ENST00000392556 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
TRAF3IP2-208ENST00000392556 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
TRAF3IP2-208ENST00000392556 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
TRAF3IP2-208ENST00000392556 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
TRAF3IP2-208ENST00000392556 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
TRAF3IP2-208ENST00000392556 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
TRAF3IP2-208ENST00000392556 STRCQ7RTU9 1775 aa17.14■□□□□ 0.33
TRAF3IP2-208ENST00000392556 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
TRAF3IP2-208ENST00000392556 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
TRAF3IP2-208ENST00000392556 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
TRAF3IP2-208ENST00000392556 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
TRAF3IP2-208ENST00000392556 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
TRAF3IP2-208ENST00000392556 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
TRAF3IP2-208ENST00000392556 CAMSAP2Q08AD1 1489 aa17.1■□□□□ 0.33
TRAF3IP2-208ENST00000392556 GGT6Q6P531 493 aa17.1■□□□□ 0.33
TRAF3IP2-208ENST00000392556 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms