RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
RFC4-202ENST00000392481 MTUS2Q5JR59 1369 aa18.84■□□□□ 0.61
RFC4-202ENST00000392481 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
RFC4-202ENST00000392481 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
RFC4-202ENST00000392481 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
RFC4-202ENST00000392481 ZMYM4Q5VZL5 1548 aa18.81■□□□□ 0.6
RFC4-202ENST00000392481 CDC42BPAQ5VT25 1732 aa18.79■□□□□ 0.6
RFC4-202ENST00000392481 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
RFC4-202ENST00000392481 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
RFC4-202ENST00000392481 ARHGEF40Q8TER5 1519 aa18.77■□□□□ 0.6
RFC4-202ENST00000392481 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
RFC4-202ENST00000392481 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
RFC4-202ENST00000392481 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
RFC4-202ENST00000392481 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
RFC4-202ENST00000392481 ZFYVE16Q7Z3T8 1539 aa18.74■□□□□ 0.59
RFC4-202ENST00000392481 ABCC1P33527 1531 aa18.73■□□□□ 0.59
RFC4-202ENST00000392481 AFAP1Q8N556 730 aa18.72■□□□□ 0.59
RFC4-202ENST00000392481 CFDP1Q9UEE9 299 aaPredicted RBP18.72■□□□□ 0.59
RFC4-202ENST00000392481 YEATS2Q9ULM3 1422 aa18.72■□□□□ 0.59
RFC4-202ENST00000392481 MAP3K1Q13233 1512 aa18.72■□□□□ 0.59
RFC4-202ENST00000392481 KDM5CP41229 1560 aa18.71■□□□□ 0.59
RFC4-202ENST00000392481 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
RFC4-202ENST00000392481 ZNF777Q9ULD5 760 aaPredicted RBP18.7■□□□□ 0.58
RFC4-202ENST00000392481 ITSN2Q9NZM3 1697 aa18.69■□□□□ 0.58
RFC4-202ENST00000392481 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
RFC4-202ENST00000392481 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
RFC4-202ENST00000392481 ARID4BQ4LE39 1312 aaPredicted RBP18.68■□□□□ 0.58
RFC4-202ENST00000392481 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
RFC4-202ENST00000392481 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
RFC4-202ENST00000392481 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
RFC4-202ENST00000392481 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
RFC4-202ENST00000392481 KIAA1107Q9UPP5 1409 aa18.67■□□□□ 0.58
RFC4-202ENST00000392481 ATP10AO60312 1499 aa18.66■□□□□ 0.58
RFC4-202ENST00000392481 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
RFC4-202ENST00000392481 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
RFC4-202ENST00000392481 BCORL1Q5H9F3 1711 aa18.64■□□□□ 0.57
RFC4-202ENST00000392481 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.57
RFC4-202ENST00000392481 ADAMTSL3P82987 1691 aa18.64■□□□□ 0.57
RFC4-202ENST00000392481 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.57
RFC4-202ENST00000392481 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
RFC4-202ENST00000392481 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
RFC4-202ENST00000392481 APLP2Q06481 763 aa18.63■□□□□ 0.57
RFC4-202ENST00000392481 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
RFC4-202ENST00000392481 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
RFC4-202ENST00000392481 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
RFC4-202ENST00000392481 DIP2CQ9Y2E4 1556 aa18.6■□□□□ 0.57
RFC4-202ENST00000392481 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
RFC4-202ENST00000392481 ABCA6Q8N139 1617 aa18.58■□□□□ 0.57
RFC4-202ENST00000392481 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
RFC4-202ENST00000392481 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
RFC4-202ENST00000392481 MBD5Q9P267 1494 aa18.56■□□□□ 0.56
RFC4-202ENST00000392481 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
RFC4-202ENST00000392481 PTPRMP28827 1452 aa18.55■□□□□ 0.56
RFC4-202ENST00000392481 CAMSAP2Q08AD1 1489 aa18.54■□□□□ 0.56
RFC4-202ENST00000392481 MLECQ14165 292 aa18.53■□□□□ 0.56
RFC4-202ENST00000392481 ATP7AQ04656 1500 aa18.53■□□□□ 0.56
RFC4-202ENST00000392481 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
RFC4-202ENST00000392481 INO80Q9ULG1 1556 aaPredicted RBP18.52■□□□□ 0.56
RFC4-202ENST00000392481 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.55
RFC4-202ENST00000392481 AGLP35573 1532 aa18.51■□□□□ 0.55
RFC4-202ENST00000392481 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
RFC4-202ENST00000392481 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
RFC4-202ENST00000392481 RTEL1-TNFRSF6BF6WH68 1400 aa18.49■□□□□ 0.55
RFC4-202ENST00000392481 CCDC141Q6ZP82 1450 aa18.49■□□□□ 0.55
RFC4-202ENST00000392481 FER1L4A9Z1Z3 1794 aa18.48■□□□□ 0.55
RFC4-202ENST00000392481 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
RFC4-202ENST00000392481 A2MP01023 1474 aa18.45■□□□□ 0.54
RFC4-202ENST00000392481 ADGBQ8N7X0 1667 aa18.44■□□□□ 0.54
RFC4-202ENST00000392481 PLXNC1O60486 1568 aa18.43■□□□□ 0.54
RFC4-202ENST00000392481 TSPY4P0CV99 314 aa18.43■□□□□ 0.54
RFC4-202ENST00000392481 TSPY10P0CW01 314 aa18.43■□□□□ 0.54
RFC4-202ENST00000392481 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
RFC4-202ENST00000392481 ESF1Q9H501 851 aaKnown RBP18.4■□□□□ 0.54
RFC4-202ENST00000392481 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.54
RFC4-202ENST00000392481 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.53
RFC4-202ENST00000392481 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
RFC4-202ENST00000392481 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
RFC4-202ENST00000392481 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
RFC4-202ENST00000392481 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
RFC4-202ENST00000392481 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
RFC4-202ENST00000392481 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
RFC4-202ENST00000392481 GGT6Q6P531 493 aa18.33■□□□□ 0.53
RFC4-202ENST00000392481 ABCC5O15440 1437 aa18.32■□□□□ 0.52
RFC4-202ENST00000392481 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
RFC4-202ENST00000392481 SETD1BQ9UPS6 1966 aaKnown RBP18.32■□□□□ 0.52
RFC4-202ENST00000392481 KIF3BO15066 747 aa18.32■□□□□ 0.52
RFC4-202ENST00000392481 SHANK2Q9UPX8 1470 aa18.31■□□□□ 0.52
RFC4-202ENST00000392481 C3P01024 1663 aa18.31■□□□□ 0.52
RFC4-202ENST00000392481 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
RFC4-202ENST00000392481 DAPK1P53355 1430 aa18.3■□□□□ 0.52
RFC4-202ENST00000392481 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
RFC4-202ENST00000392481 CROCC2H7BZ55 1655 aa18.29■□□□□ 0.52
RFC4-202ENST00000392481 ZMYM3Q14202 1370 aa18.29■□□□□ 0.52
RFC4-202ENST00000392481 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.51
RFC4-202ENST00000392481 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.51
RFC4-202ENST00000392481 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
RFC4-202ENST00000392481 DUOX2Q9NRD8 1548 aa18.25■□□□□ 0.51
RFC4-202ENST00000392481 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
RFC4-202ENST00000392481 NPATQ14207 1427 aa18.24■□□□□ 0.51
RFC4-202ENST00000392481 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms