RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
GGPS1-203ENST00000391855 RICTORQ6R327 1708 aa20.18■□□□□ 0.82
GGPS1-203ENST00000391855 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
GGPS1-203ENST00000391855 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
GGPS1-203ENST00000391855 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
GGPS1-203ENST00000391855 RAPGEF3O95398 923 aa20.17■□□□□ 0.82
GGPS1-203ENST00000391855 ZMYM4Q5VZL5 1548 aa20.16■□□□□ 0.82
GGPS1-203ENST00000391855 POGZQ7Z3K3 1410 aa20.14■□□□□ 0.81
GGPS1-203ENST00000391855 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
GGPS1-203ENST00000391855 CDC42BPBQ9Y5S2 1711 aa20.14■□□□□ 0.81
GGPS1-203ENST00000391855 MAGI2Q86UL8 1455 aa20.12■□□□□ 0.81
GGPS1-203ENST00000391855 CDC42BPAQ5VT25 1732 aa20.12■□□□□ 0.81
GGPS1-203ENST00000391855 ARHGEF40Q8TER5 1519 aa20.12■□□□□ 0.81
GGPS1-203ENST00000391855 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
GGPS1-203ENST00000391855 ZNF518AQ6AHZ1 1483 aa20.09■□□□□ 0.81
GGPS1-203ENST00000391855 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
GGPS1-203ENST00000391855 ABCC1P33527 1531 aa20.09■□□□□ 0.81
GGPS1-203ENST00000391855 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
GGPS1-203ENST00000391855 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
GGPS1-203ENST00000391855 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.8
GGPS1-203ENST00000391855 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.8
GGPS1-203ENST00000391855 ITSN2Q9NZM3 1697 aa20.06■□□□□ 0.8
GGPS1-203ENST00000391855 KDM5CP41229 1560 aa20.06■□□□□ 0.8
GGPS1-203ENST00000391855 SUPT6HQ7KZ85 1726 aaKnown RBP20.04■□□□□ 0.8
GGPS1-203ENST00000391855 PLEKHH2Q8IVE3 1493 aa20.04■□□□□ 0.8
GGPS1-203ENST00000391855 SAMD9LQ8IVG5 1584 aa20.01■□□□□ 0.79
GGPS1-203ENST00000391855 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
GGPS1-203ENST00000391855 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
GGPS1-203ENST00000391855 HECW2Q9P2P5 1572 aa20.01■□□□□ 0.79
GGPS1-203ENST00000391855 NCOA2Q15596 1464 aa20■□□□□ 0.79
GGPS1-203ENST00000391855 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
GGPS1-203ENST00000391855 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
GGPS1-203ENST00000391855 MLH3Q9UHC1 1453 aa19.99■□□□□ 0.79
GGPS1-203ENST00000391855 ARHGEF12Q9NZN5 1544 aa19.98■□□□□ 0.79
GGPS1-203ENST00000391855 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
GGPS1-203ENST00000391855 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
GGPS1-203ENST00000391855 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
GGPS1-203ENST00000391855 ATP10AO60312 1499 aa19.96■□□□□ 0.79
GGPS1-203ENST00000391855 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
GGPS1-203ENST00000391855 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
GGPS1-203ENST00000391855 APLP2Q06481 763 aa19.95■□□□□ 0.78
GGPS1-203ENST00000391855 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
GGPS1-203ENST00000391855 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
GGPS1-203ENST00000391855 ADAMTSL3P82987 1691 aa19.94■□□□□ 0.78
GGPS1-203ENST00000391855 REREQ9P2R6 1566 aa19.93■□□□□ 0.78
GGPS1-203ENST00000391855 DIP2CQ9Y2E4 1556 aa19.92■□□□□ 0.78
GGPS1-203ENST00000391855 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
GGPS1-203ENST00000391855 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
GGPS1-203ENST00000391855 KIDINS220Q9ULH0 1771 aa19.89■□□□□ 0.77
GGPS1-203ENST00000391855 KANK4Q5T7N3 995 aaPredicted RBP19.87■□□□□ 0.77
GGPS1-203ENST00000391855 MADDQ8WXG6 1647 aa19.87■□□□□ 0.77
GGPS1-203ENST00000391855 SIGLEC1Q9BZZ2 1709 aa19.87■□□□□ 0.77
GGPS1-203ENST00000391855 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
GGPS1-203ENST00000391855 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
GGPS1-203ENST00000391855 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
GGPS1-203ENST00000391855 MBD5Q9P267 1494 aa19.86■□□□□ 0.77
GGPS1-203ENST00000391855 ATP7AQ04656 1500 aa19.86■□□□□ 0.77
GGPS1-203ENST00000391855 INO80Q9ULG1 1556 aaPredicted RBP19.86■□□□□ 0.77
GGPS1-203ENST00000391855 AGLP35573 1532 aa19.85■□□□□ 0.77
GGPS1-203ENST00000391855 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
GGPS1-203ENST00000391855 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
GGPS1-203ENST00000391855 RSPH4AQ5TD94 716 aa19.84■□□□□ 0.77
GGPS1-203ENST00000391855 PTPRMP28827 1452 aa19.83■□□□□ 0.77
GGPS1-203ENST00000391855 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.77
GGPS1-203ENST00000391855 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.76
GGPS1-203ENST00000391855 ARHGEF5Q12774 1597 aa19.82■□□□□ 0.76
GGPS1-203ENST00000391855 RTEL1-TNFRSF6BF6WH68 1400 aa19.81■□□□□ 0.76
GGPS1-203ENST00000391855 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
GGPS1-203ENST00000391855 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
GGPS1-203ENST00000391855 ADGBQ8N7X0 1667 aa19.77■□□□□ 0.76
GGPS1-203ENST00000391855 PLXNC1O60486 1568 aa19.77■□□□□ 0.75
GGPS1-203ENST00000391855 MLECQ14165 292 aa19.76■□□□□ 0.75
GGPS1-203ENST00000391855 A2MP01023 1474 aa19.75■□□□□ 0.75
GGPS1-203ENST00000391855 MAST1Q9Y2H9 1570 aa19.72■□□□□ 0.75
GGPS1-203ENST00000391855 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
GGPS1-203ENST00000391855 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
GGPS1-203ENST00000391855 ADRA2BP18089 450 aa19.71■□□□□ 0.75
GGPS1-203ENST00000391855 FGD6Q6ZV73 1430 aa19.71■□□□□ 0.75
GGPS1-203ENST00000391855 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
GGPS1-203ENST00000391855 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
GGPS1-203ENST00000391855 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
GGPS1-203ENST00000391855 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
GGPS1-203ENST00000391855 ESF1Q9H501 851 aaKnown RBP19.68■□□□□ 0.74
GGPS1-203ENST00000391855 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
GGPS1-203ENST00000391855 SHANK2Q9UPX8 1470 aa19.67■□□□□ 0.74
GGPS1-203ENST00000391855 DNMT1P26358 1616 aaKnown RBP19.64■□□□□ 0.73
GGPS1-203ENST00000391855 CROCC2H7BZ55 1655 aa19.64■□□□□ 0.73
GGPS1-203ENST00000391855 FAM135AQ9P2D6 1515 aa19.63■□□□□ 0.73
GGPS1-203ENST00000391855 MROH2AA6NES4 1674 aa19.63■□□□□ 0.73
GGPS1-203ENST00000391855 ABCC5O15440 1437 aa19.6■□□□□ 0.73
GGPS1-203ENST00000391855 DAPK1P53355 1430 aa19.6■□□□□ 0.73
GGPS1-203ENST00000391855 C3P01024 1663 aa19.59■□□□□ 0.73
GGPS1-203ENST00000391855 LMTK3Q96Q04 1460 aa19.58■□□□□ 0.73
GGPS1-203ENST00000391855 EIF2AK4Q9P2K8 1649 aaKnown RBP19.58■□□□□ 0.72
GGPS1-203ENST00000391855 DUOX2Q9NRD8 1548 aa19.57■□□□□ 0.72
GGPS1-203ENST00000391855 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
GGPS1-203ENST00000391855 GGT6Q6P531 493 aa19.56■□□□□ 0.72
GGPS1-203ENST00000391855 CLTCQ00610 1675 aaKnown RBP19.55■□□□□ 0.72
GGPS1-203ENST00000391855 KIF3BO15066 747 aa19.55■□□□□ 0.72
GGPS1-203ENST00000391855 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms