RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SUPT6HQ7KZ85 1726 aaKnown RBP23.62■■□□□ 1.37
IGHV3-53-201ENST00000390627 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
IGHV3-53-201ENST00000390627 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
IGHV3-53-201ENST00000390627 CDC42BPBQ9Y5S2 1711 aa23.62■■□□□ 1.37
IGHV3-53-201ENST00000390627 ADGRL1O94910 1474 aa23.61■■□□□ 1.37
IGHV3-53-201ENST00000390627 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
IGHV3-53-201ENST00000390627 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
IGHV3-53-201ENST00000390627 NCOA2Q15596 1464 aa23.58■■□□□ 1.37
IGHV3-53-201ENST00000390627 ITSN2Q9NZM3 1697 aa23.56■■□□□ 1.36
IGHV3-53-201ENST00000390627 SCAPERQ9BY12 1400 aa23.56■■□□□ 1.36
IGHV3-53-201ENST00000390627 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
IGHV3-53-201ENST00000390627 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
IGHV3-53-201ENST00000390627 FRMPD1Q5SYB0 1578 aa23.55■■□□□ 1.36
IGHV3-53-201ENST00000390627 RICTORQ6R327 1708 aa23.53■■□□□ 1.36
IGHV3-53-201ENST00000390627 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
IGHV3-53-201ENST00000390627 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
IGHV3-53-201ENST00000390627 ABCC1P33527 1531 aa23.51■■□□□ 1.35
IGHV3-53-201ENST00000390627 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
IGHV3-53-201ENST00000390627 SAMD9LQ8IVG5 1584 aa23.48■■□□□ 1.35
IGHV3-53-201ENST00000390627 ZNF518AQ6AHZ1 1483 aa23.48■■□□□ 1.35
IGHV3-53-201ENST00000390627 PLEKHH2Q8IVE3 1493 aa23.48■■□□□ 1.35
IGHV3-53-201ENST00000390627 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
IGHV3-53-201ENST00000390627 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
IGHV3-53-201ENST00000390627 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
IGHV3-53-201ENST00000390627 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
IGHV3-53-201ENST00000390627 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
IGHV3-53-201ENST00000390627 KDM5CP41229 1560 aa23.42■■□□□ 1.34
IGHV3-53-201ENST00000390627 ARHGEF40Q8TER5 1519 aa23.42■■□□□ 1.34
IGHV3-53-201ENST00000390627 MYOM3Q5VTT5 1437 aa23.41■■□□□ 1.34
IGHV3-53-201ENST00000390627 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
IGHV3-53-201ENST00000390627 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
IGHV3-53-201ENST00000390627 AFAP1Q8N556 730 aa23.39■■□□□ 1.33
IGHV3-53-201ENST00000390627 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
IGHV3-53-201ENST00000390627 CAMSAP2Q08AD1 1489 aa23.37■■□□□ 1.33
IGHV3-53-201ENST00000390627 HECW2Q9P2P5 1572 aa23.37■■□□□ 1.33
IGHV3-53-201ENST00000390627 ZNF644Q9H582 1327 aaPredicted RBP23.36■■□□□ 1.33
IGHV3-53-201ENST00000390627 HNRNPMP52272 730 aaKnown RBP eCLIP23.36■■□□□ 1.33
IGHV3-53-201ENST00000390627 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
IGHV3-53-201ENST00000390627 YEATS2Q9ULM3 1422 aa23.34■■□□□ 1.33
IGHV3-53-201ENST00000390627 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
IGHV3-53-201ENST00000390627 MBD5Q9P267 1494 aa23.32■■□□□ 1.32
IGHV3-53-201ENST00000390627 SPAG9O60271 1321 aaKnown RBP23.3■■□□□ 1.32
IGHV3-53-201ENST00000390627 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
IGHV3-53-201ENST00000390627 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
IGHV3-53-201ENST00000390627 FGD6Q6ZV73 1430 aa23.28■■□□□ 1.32
IGHV3-53-201ENST00000390627 ATP10AO60312 1499 aa23.28■■□□□ 1.32
IGHV3-53-201ENST00000390627 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
IGHV3-53-201ENST00000390627 C9orf84Q5VXU9 1444 aa23.27■■□□□ 1.32
IGHV3-53-201ENST00000390627 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
IGHV3-53-201ENST00000390627 DIP2CQ9Y2E4 1556 aa23.26■■□□□ 1.31
IGHV3-53-201ENST00000390627 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
IGHV3-53-201ENST00000390627 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
IGHV3-53-201ENST00000390627 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
IGHV3-53-201ENST00000390627 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
IGHV3-53-201ENST00000390627 ARID4BQ4LE39 1312 aaPredicted RBP23.24■■□□□ 1.31
IGHV3-53-201ENST00000390627 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
IGHV3-53-201ENST00000390627 RTEL1-TNFRSF6BF6WH68 1400 aa23.22■■□□□ 1.31
IGHV3-53-201ENST00000390627 REREQ9P2R6 1566 aa23.22■■□□□ 1.31
IGHV3-53-201ENST00000390627 KDM4FA0A1W2PPD8 638 aa23.2■■□□□ 1.3
IGHV3-53-201ENST00000390627 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
IGHV3-53-201ENST00000390627 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
IGHV3-53-201ENST00000390627 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
IGHV3-53-201ENST00000390627 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
IGHV3-53-201ENST00000390627 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
IGHV3-53-201ENST00000390627 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.3
IGHV3-53-201ENST00000390627 AGLP35573 1532 aa23.14■■□□□ 1.3
IGHV3-53-201ENST00000390627 ADGBQ8N7X0 1667 aa23.13■■□□□ 1.29
IGHV3-53-201ENST00000390627 A2MP01023 1474 aa23.13■■□□□ 1.29
IGHV3-53-201ENST00000390627 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
IGHV3-53-201ENST00000390627 DNMT1P26358 1616 aaKnown RBP23.12■■□□□ 1.29
IGHV3-53-201ENST00000390627 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
IGHV3-53-201ENST00000390627 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
IGHV3-53-201ENST00000390627 ADAMTSL3P82987 1691 aa23.12■■□□□ 1.29
IGHV3-53-201ENST00000390627 ABCC5O15440 1437 aa23.11■■□□□ 1.29
IGHV3-53-201ENST00000390627 DAPK1P53355 1430 aa23.11■■□□□ 1.29
IGHV3-53-201ENST00000390627 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
IGHV3-53-201ENST00000390627 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
IGHV3-53-201ENST00000390627 MLECQ14165 292 aa23.07■■□□□ 1.28
IGHV3-53-201ENST00000390627 MADDQ8WXG6 1647 aa23.06■■□□□ 1.28
IGHV3-53-201ENST00000390627 DHX29Q7Z478 1369 aaKnown RBP23.05■■□□□ 1.28
IGHV3-53-201ENST00000390627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
IGHV3-53-201ENST00000390627 FER1L4A9Z1Z3 1794 aa23.01■■□□□ 1.27
IGHV3-53-201ENST00000390627 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
IGHV3-53-201ENST00000390627 ANKRD30AQ9BXX3 1397 aa23■■□□□ 1.27
IGHV3-53-201ENST00000390627 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
IGHV3-53-201ENST00000390627 PTPRMP28827 1452 aa22.99■■□□□ 1.27
IGHV3-53-201ENST00000390627 KIF15Q9NS87 1388 aa22.99■■□□□ 1.27
IGHV3-53-201ENST00000390627 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
IGHV3-53-201ENST00000390627 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
IGHV3-53-201ENST00000390627 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
IGHV3-53-201ENST00000390627 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
IGHV3-53-201ENST00000390627 EIF2AK4Q9P2K8 1649 aaKnown RBP22.94■■□□□ 1.26
IGHV3-53-201ENST00000390627 NCOA1Q15788 1441 aa22.94■■□□□ 1.26
IGHV3-53-201ENST00000390627 CNTLNQ9NXG0 1405 aa22.94■■□□□ 1.26
IGHV3-53-201ENST00000390627 KIF3BO15066 747 aa22.94■■□□□ 1.26
IGHV3-53-201ENST00000390627 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
IGHV3-53-201ENST00000390627 ERBINQ96RT1 1412 aa22.93■■□□□ 1.26
IGHV3-53-201ENST00000390627 GGT6Q6P531 493 aa22.93■■□□□ 1.26
IGHV3-53-201ENST00000390627 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
IGHV3-53-201ENST00000390627 PTPRKQ15262 1439 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms