RNA–Protein interactions for RNA: ENST00000390435.1

TRAV8-3-201, Transcript of T cell receptor alpha variable 8-3, humanhuman

APPRIS P1 BASIC

Gene TRAV8-3, Length 341 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3-201ENST00000390435 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
TRAV8-3-201ENST00000390435 FANCAO15360 1455 aa11.71□□□□□ -0.53
TRAV8-3-201ENST00000390435 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
TRAV8-3-201ENST00000390435 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
TRAV8-3-201ENST00000390435 NEO1Q92859 1461 aa11.7□□□□□ -0.54
TRAV8-3-201ENST00000390435 MYOM3Q5VTT5 1437 aa11.7□□□□□ -0.54
TRAV8-3-201ENST00000390435 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
TRAV8-3-201ENST00000390435 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
TRAV8-3-201ENST00000390435 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
TRAV8-3-201ENST00000390435 PLEKHH2Q8IVE3 1493 aa11.69□□□□□ -0.54
TRAV8-3-201ENST00000390435 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
TRAV8-3-201ENST00000390435 ADGRL1O94910 1474 aa11.67□□□□□ -0.54
TRAV8-3-201ENST00000390435 AKNAQ7Z591 1439 aa11.67□□□□□ -0.54
TRAV8-3-201ENST00000390435 KDM6BO15054 1643 aa11.67□□□□□ -0.54
TRAV8-3-201ENST00000390435 PTPN23Q9H3S7 1636 aa11.66□□□□□ -0.54
TRAV8-3-201ENST00000390435 FGD6Q6ZV73 1430 aa11.65□□□□□ -0.54
TRAV8-3-201ENST00000390435 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
TRAV8-3-201ENST00000390435 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
TRAV8-3-201ENST00000390435 ABCC1P33527 1531 aa11.64□□□□□ -0.55
TRAV8-3-201ENST00000390435 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
TRAV8-3-201ENST00000390435 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
TRAV8-3-201ENST00000390435 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
TRAV8-3-201ENST00000390435 SCAPERQ9BY12 1400 aa11.62□□□□□ -0.55
TRAV8-3-201ENST00000390435 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
TRAV8-3-201ENST00000390435 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
TRAV8-3-201ENST00000390435 RSPH4AQ5TD94 716 aa11.61□□□□□ -0.55
TRAV8-3-201ENST00000390435 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
TRAV8-3-201ENST00000390435 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
TRAV8-3-201ENST00000390435 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
TRAV8-3-201ENST00000390435 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
TRAV8-3-201ENST00000390435 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
TRAV8-3-201ENST00000390435 POGZQ7Z3K3 1410 aa11.59□□□□□ -0.55
TRAV8-3-201ENST00000390435 TSPY4P0CV99 314 aa11.58□□□□□ -0.56
TRAV8-3-201ENST00000390435 TSPY10P0CW01 314 aa11.58□□□□□ -0.56
TRAV8-3-201ENST00000390435 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
TRAV8-3-201ENST00000390435 CROCC2H7BZ55 1655 aa11.57□□□□□ -0.56
TRAV8-3-201ENST00000390435 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAV8-3-201ENST00000390435 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
TRAV8-3-201ENST00000390435 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
TRAV8-3-201ENST00000390435 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
TRAV8-3-201ENST00000390435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAV8-3-201ENST00000390435 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
TRAV8-3-201ENST00000390435 KDM5CP41229 1560 aa11.55□□□□□ -0.56
TRAV8-3-201ENST00000390435 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
TRAV8-3-201ENST00000390435 MAGI2Q86UL8 1455 aa11.55□□□□□ -0.56
TRAV8-3-201ENST00000390435 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
TRAV8-3-201ENST00000390435 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
TRAV8-3-201ENST00000390435 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
TRAV8-3-201ENST00000390435 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
TRAV8-3-201ENST00000390435 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
TRAV8-3-201ENST00000390435 DAPK1P53355 1430 aa11.53□□□□□ -0.56
TRAV8-3-201ENST00000390435 SHANK2Q9UPX8 1470 aa11.53□□□□□ -0.56
TRAV8-3-201ENST00000390435 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
TRAV8-3-201ENST00000390435 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
TRAV8-3-201ENST00000390435 MBD5Q9P267 1494 aa11.52□□□□□ -0.56
TRAV8-3-201ENST00000390435 ITGAEP38570 1179 aa11.52□□□□□ -0.57
TRAV8-3-201ENST00000390435 AFAP1Q8N556 730 aa11.52□□□□□ -0.57
TRAV8-3-201ENST00000390435 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
TRAV8-3-201ENST00000390435 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
TRAV8-3-201ENST00000390435 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
TRAV8-3-201ENST00000390435 ARHGEF40Q8TER5 1519 aa11.51□□□□□ -0.57
TRAV8-3-201ENST00000390435 INO80Q9ULG1 1556 aaPredicted RBP11.51□□□□□ -0.57
TRAV8-3-201ENST00000390435 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
TRAV8-3-201ENST00000390435 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
TRAV8-3-201ENST00000390435 KIDINS220Q9ULH0 1771 aa11.5□□□□□ -0.57
TRAV8-3-201ENST00000390435 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
TRAV8-3-201ENST00000390435 ABCC5O15440 1437 aa11.5□□□□□ -0.57
TRAV8-3-201ENST00000390435 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
TRAV8-3-201ENST00000390435 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
TRAV8-3-201ENST00000390435 DIP2CQ9Y2E4 1556 aa11.47□□□□□ -0.57
TRAV8-3-201ENST00000390435 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
TRAV8-3-201ENST00000390435 ATP10AO60312 1499 aa11.46□□□□□ -0.57
TRAV8-3-201ENST00000390435 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
TRAV8-3-201ENST00000390435 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
TRAV8-3-201ENST00000390435 ARID4BQ4LE39 1312 aaPredicted RBP11.45□□□□□ -0.58
TRAV8-3-201ENST00000390435 TRIM26Q12899 539 aaPredicted RBP11.45□□□□□ -0.58
TRAV8-3-201ENST00000390435 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
TRAV8-3-201ENST00000390435 A2MP01023 1474 aa11.44□□□□□ -0.58
TRAV8-3-201ENST00000390435 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
TRAV8-3-201ENST00000390435 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
TRAV8-3-201ENST00000390435 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
TRAV8-3-201ENST00000390435 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
TRAV8-3-201ENST00000390435 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
TRAV8-3-201ENST00000390435 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
TRAV8-3-201ENST00000390435 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
TRAV8-3-201ENST00000390435 ERBINQ96RT1 1412 aa11.42□□□□□ -0.58
TRAV8-3-201ENST00000390435 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
TRAV8-3-201ENST00000390435 ESF1Q9H501 851 aaKnown RBP11.4□□□□□ -0.58
TRAV8-3-201ENST00000390435 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
TRAV8-3-201ENST00000390435 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
TRAV8-3-201ENST00000390435 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
TRAV8-3-201ENST00000390435 AGLP35573 1532 aa11.39□□□□□ -0.59
TRAV8-3-201ENST00000390435 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
TRAV8-3-201ENST00000390435 KANK1Q14678 1352 aa11.38□□□□□ -0.59
TRAV8-3-201ENST00000390435 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
TRAV8-3-201ENST00000390435 KIF3BO15066 747 aa11.37□□□□□ -0.59
TRAV8-3-201ENST00000390435 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
TRAV8-3-201ENST00000390435 MLECQ14165 292 aa11.36□□□□□ -0.59
TRAV8-3-201ENST00000390435 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
TRAV8-3-201ENST00000390435 GGT6Q6P531 493 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms