RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
KCNQ3-201ENST00000388996 NRDCO43847 1150 aa15.75■□□□□ 0.11
KCNQ3-201ENST00000388996 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
KCNQ3-201ENST00000388996 SOGA1O94964 1423 aa15.74■□□□□ 0.11
KCNQ3-201ENST00000388996 CCDC88BA6NC98 1476 aa15.73■□□□□ 0.11
KCNQ3-201ENST00000388996 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
KCNQ3-201ENST00000388996 MLECQ14165 292 aa15.72■□□□□ 0.11
KCNQ3-201ENST00000388996 ERICH6BQ5W0A0 696 aa15.72■□□□□ 0.11
KCNQ3-201ENST00000388996 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
KCNQ3-201ENST00000388996 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
KCNQ3-201ENST00000388996 MCCP23508 829 aa15.71■□□□□ 0.11
KCNQ3-201ENST00000388996 GOLGA6L4A6NEF3 574 aa15.7■□□□□ 0.1
KCNQ3-201ENST00000388996 SOX12O15370 315 aa15.7■□□□□ 0.1
KCNQ3-201ENST00000388996 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
KCNQ3-201ENST00000388996 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
KCNQ3-201ENST00000388996 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
KCNQ3-201ENST00000388996 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
KCNQ3-201ENST00000388996 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
KCNQ3-201ENST00000388996 HDGFL2Q7Z4V5 671 aaPredicted RBP15.66■□□□□ 0.1
KCNQ3-201ENST00000388996 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
KCNQ3-201ENST00000388996 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
KCNQ3-201ENST00000388996 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
KCNQ3-201ENST00000388996 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
KCNQ3-201ENST00000388996 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
KCNQ3-201ENST00000388996 CLSTN1O94985 981 aa15.65■□□□□ 0.1
KCNQ3-201ENST00000388996 PKD2Q13563 968 aa15.64■□□□□ 0.09
KCNQ3-201ENST00000388996 IPO8O15397 1037 aaKnown RBP15.64■□□□□ 0.09
KCNQ3-201ENST00000388996 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
KCNQ3-201ENST00000388996 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
KCNQ3-201ENST00000388996 STK26Q9P289 416 aa15.63■□□□□ 0.09
KCNQ3-201ENST00000388996 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
KCNQ3-201ENST00000388996 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
KCNQ3-201ENST00000388996 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
KCNQ3-201ENST00000388996 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
KCNQ3-201ENST00000388996 NUP155O75694 1391 aa15.61■□□□□ 0.09
KCNQ3-201ENST00000388996 TIMELESSQ9UNS1 1208 aa15.61■□□□□ 0.09
KCNQ3-201ENST00000388996 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
KCNQ3-201ENST00000388996 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
KCNQ3-201ENST00000388996 FOXD1Q16676 465 aa15.58■□□□□ 0.08
KCNQ3-201ENST00000388996 GGT6Q6P531 493 aa15.58■□□□□ 0.08
KCNQ3-201ENST00000388996 HSPA5P11021 654 aaKnown RBP15.58■□□□□ 0.08
KCNQ3-201ENST00000388996 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
KCNQ3-201ENST00000388996 RALBP1Q15311 655 aa15.57■□□□□ 0.08
KCNQ3-201ENST00000388996 GPATCH3Q96I76 525 aa15.57■□□□□ 0.08
KCNQ3-201ENST00000388996 ITPRIPQ8IWB1 547 aa15.56■□□□□ 0.08
KCNQ3-201ENST00000388996 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
KCNQ3-201ENST00000388996 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
KCNQ3-201ENST00000388996 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
KCNQ3-201ENST00000388996 APBB1O00213 710 aa15.55■□□□□ 0.08
KCNQ3-201ENST00000388996 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
KCNQ3-201ENST00000388996 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
KCNQ3-201ENST00000388996 DRC7Q8IY82 874 aa15.55■□□□□ 0.08
KCNQ3-201ENST00000388996 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
KCNQ3-201ENST00000388996 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
KCNQ3-201ENST00000388996 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.08
KCNQ3-201ENST00000388996 SPRYD3Q8NCJ5 442 aa15.52■□□□□ 0.07
KCNQ3-201ENST00000388996 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.07
KCNQ3-201ENST00000388996 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
KCNQ3-201ENST00000388996 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
KCNQ3-201ENST00000388996 TERF2IPQ9NYB0 399 aa15.51■□□□□ 0.07
KCNQ3-201ENST00000388996 GBP4Q96PP9 640 aa15.5■□□□□ 0.07
KCNQ3-201ENST00000388996 RCAN3Q9UKA8 241 aa15.5■□□□□ 0.07
KCNQ3-201ENST00000388996 RWDD1Q9H446 243 aaPredicted RBP15.5■□□□□ 0.07
KCNQ3-201ENST00000388996 MSNP26038 577 aaKnown RBP15.49■□□□□ 0.07
KCNQ3-201ENST00000388996 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
KCNQ3-201ENST00000388996 PTMSP20962 102 aa15.49■□□□□ 0.07
KCNQ3-201ENST00000388996 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
KCNQ3-201ENST00000388996 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
KCNQ3-201ENST00000388996 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
KCNQ3-201ENST00000388996 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
KCNQ3-201ENST00000388996 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
KCNQ3-201ENST00000388996 PHLDB1Q86UU1 1377 aa15.46■□□□□ 0.07
KCNQ3-201ENST00000388996 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
KCNQ3-201ENST00000388996 UACAQ9BZF9 1416 aa15.46■□□□□ 0.07
KCNQ3-201ENST00000388996 HMMRO75330 724 aa15.46■□□□□ 0.06
KCNQ3-201ENST00000388996 CHMP3Q9Y3E7 222 aa15.45■□□□□ 0.06
KCNQ3-201ENST00000388996 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 HDAC5Q9UQL6 1122 aa15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 LMOD3Q0VAK6 560 aa15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 CCDC144AA2RUR9 1427 aa15.44■□□□□ 0.06
KCNQ3-201ENST00000388996 CUX1P39880 1505 aa15.43■□□□□ 0.06
KCNQ3-201ENST00000388996 WASHC2CQ9Y4E1 1318 aa15.42■□□□□ 0.06
KCNQ3-201ENST00000388996 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
KCNQ3-201ENST00000388996 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
KCNQ3-201ENST00000388996 NOC3LQ8WTT2 800 aaKnown RBP15.41■□□□□ 0.06
KCNQ3-201ENST00000388996 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
KCNQ3-201ENST00000388996 HSP90B1P14625 803 aaKnown RBP15.4■□□□□ 0.06
KCNQ3-201ENST00000388996 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
KCNQ3-201ENST00000388996 CCDC34Q96HJ3 373 aa15.4■□□□□ 0.06
KCNQ3-201ENST00000388996 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
KCNQ3-201ENST00000388996 KIF3BO15066 747 aa15.39■□□□□ 0.05
KCNQ3-201ENST00000388996 CENPJQ9HC77 1338 aaPredicted RBP15.39■□□□□ 0.05
KCNQ3-201ENST00000388996 PMFBP1Q8TBY8 1022 aa15.38■□□□□ 0.05
KCNQ3-201ENST00000388996 SLKQ9H2G2 1235 aaPredicted RBP15.38■□□□□ 0.05
KCNQ3-201ENST00000388996 RSPH4AQ5TD94 716 aa15.37■□□□□ 0.05
KCNQ3-201ENST00000388996 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
KCNQ3-201ENST00000388996 NGDNQ8NEJ9 315 aaKnown RBP15.37■□□□□ 0.05
KCNQ3-201ENST00000388996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms