RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 MYO5CQ9NQX4 1742 aa29.49■■■□□ 2.31
RPUSD3-201ENST00000383820 RIMS1Q86UR5 1692 aaKnown RBP29.49■■■□□ 2.31
RPUSD3-201ENST00000383820 EFCAB2Q5VUJ9 269 aa29.47■■■□□ 2.31
RPUSD3-201ENST00000383820 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
RPUSD3-201ENST00000383820 KIF14Q15058 1648 aa29.45■■■□□ 2.31
RPUSD3-201ENST00000383820 TROQ12816 1431 aaPredicted RBP29.45■■■□□ 2.3
RPUSD3-201ENST00000383820 SIGLEC1Q9BZZ2 1709 aa29.42■■■□□ 2.3
RPUSD3-201ENST00000383820 LMTK3Q96Q04 1460 aa29.42■■■□□ 2.3
RPUSD3-201ENST00000383820 CLIP1P30622 1438 aa29.42■■■□□ 2.3
RPUSD3-201ENST00000383820 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
RPUSD3-201ENST00000383820 ATP10AO60312 1499 aa29.37■■■□□ 2.29
RPUSD3-201ENST00000383820 ZNF518AQ6AHZ1 1483 aa29.36■■■□□ 2.29
RPUSD3-201ENST00000383820 C9orf84Q5VXU9 1444 aa29.35■■■□□ 2.29
RPUSD3-201ENST00000383820 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
RPUSD3-201ENST00000383820 FER1L4A9Z1Z3 1794 aa29.33■■■□□ 2.29
RPUSD3-201ENST00000383820 KDM5CP41229 1560 aa29.31■■■□□ 2.28
RPUSD3-201ENST00000383820 CCDC18Q5T9S5 1454 aa29.31■■■□□ 2.28
RPUSD3-201ENST00000383820 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
RPUSD3-201ENST00000383820 MLECQ14165 292 aa29.3■■■□□ 2.28
RPUSD3-201ENST00000383820 ARHGEF12Q9NZN5 1544 aa29.3■■■□□ 2.28
RPUSD3-201ENST00000383820 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
RPUSD3-201ENST00000383820 CDC42BPBQ9Y5S2 1711 aa29.26■■■□□ 2.27
RPUSD3-201ENST00000383820 AFAP1Q8N556 730 aa29.24■■■□□ 2.27
RPUSD3-201ENST00000383820 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
RPUSD3-201ENST00000383820 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
RPUSD3-201ENST00000383820 REREQ9P2R6 1566 aa29.21■■■□□ 2.27
RPUSD3-201ENST00000383820 HSPA2P54652 639 aa29.2■■■□□ 2.26
RPUSD3-201ENST00000383820 FYCO1Q9BQS8 1478 aa29.2■■■□□ 2.26
RPUSD3-201ENST00000383820 MLH3Q9UHC1 1453 aa29.2■■■□□ 2.26
RPUSD3-201ENST00000383820 DIP2CQ9Y2E4 1556 aa29.18■■■□□ 2.26
RPUSD3-201ENST00000383820 ABCC1P33527 1531 aa29.18■■■□□ 2.26
RPUSD3-201ENST00000383820 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
RPUSD3-201ENST00000383820 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.26
RPUSD3-201ENST00000383820 PREX1Q8TCU6 1659 aa29.13■■■□□ 2.25
RPUSD3-201ENST00000383820 ABCA6Q8N139 1617 aa29.12■■■□□ 2.25
RPUSD3-201ENST00000383820 TRAPPC8Q9Y2L5 1435 aa29.12■■■□□ 2.25
RPUSD3-201ENST00000383820 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
RPUSD3-201ENST00000383820 AGLP35573 1532 aa29.1■■■□□ 2.25
RPUSD3-201ENST00000383820 CEBPAP49715 358 aaPredicted RBP29.07■■■□□ 2.24
RPUSD3-201ENST00000383820 KIDINS220Q9ULH0 1771 aa29.04■■■□□ 2.24
RPUSD3-201ENST00000383820 SETD1BQ9UPS6 1966 aaKnown RBP29.04■■■□□ 2.24
RPUSD3-201ENST00000383820 GPATCH8Q9UKJ3 1502 aaKnown RBP29.01■■■□□ 2.23
RPUSD3-201ENST00000383820 UHRF1BP1Q6BDS2 1440 aa29.01■■■□□ 2.23
RPUSD3-201ENST00000383820 SAMD9LQ8IVG5 1584 aa29■■■□□ 2.23
RPUSD3-201ENST00000383820 ESF1Q9H501 851 aaKnown RBP28.98■■■□□ 2.23
RPUSD3-201ENST00000383820 C3P01024 1663 aa28.98■■■□□ 2.23
RPUSD3-201ENST00000383820 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
RPUSD3-201ENST00000383820 CNTLNQ9NXG0 1405 aa28.95■■■□□ 2.23
RPUSD3-201ENST00000383820 SYCP2Q9BX26 1530 aa28.95■■■□□ 2.23
RPUSD3-201ENST00000383820 PLEKHH2Q8IVE3 1493 aa28.95■■■□□ 2.22
RPUSD3-201ENST00000383820 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
RPUSD3-201ENST00000383820 CERKQ8TCT0 537 aa28.94■■■□□ 2.22
RPUSD3-201ENST00000383820 DMRT2Q9Y5R5 561 aa28.94■■■□□ 2.22
RPUSD3-201ENST00000383820 SPAG9O60271 1321 aaKnown RBP28.92■■■□□ 2.22
RPUSD3-201ENST00000383820 STRCQ7RTU9 1775 aa28.91■■■□□ 2.22
RPUSD3-201ENST00000383820 CCNB3Q8WWL7 1395 aa28.9■■■□□ 2.22
RPUSD3-201ENST00000383820 CFDP1Q9UEE9 299 aaPredicted RBP28.9■■■□□ 2.22
RPUSD3-201ENST00000383820 MTUS2Q5JR59 1369 aa28.89■■■□□ 2.22
RPUSD3-201ENST00000383820 HNRNPMP52272 730 aaKnown RBP eCLIP28.89■■■□□ 2.22
RPUSD3-201ENST00000383820 ATP7AQ04656 1500 aa28.87■■■□□ 2.21
RPUSD3-201ENST00000383820 MROH2AA6NES4 1674 aa28.86■■■□□ 2.21
RPUSD3-201ENST00000383820 INO80Q9ULG1 1556 aaPredicted RBP28.85■■■□□ 2.21
RPUSD3-201ENST00000383820 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
RPUSD3-201ENST00000383820 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
RPUSD3-201ENST00000383820 EHBP1L1Q8N3D4 1523 aa28.81■■■□□ 2.2
RPUSD3-201ENST00000383820 PTPRTO14522 1441 aa28.81■■■□□ 2.2
RPUSD3-201ENST00000383820 NPATQ14207 1427 aa28.81■■■□□ 2.2
RPUSD3-201ENST00000383820 A2MP01023 1474 aa28.79■■■□□ 2.2
RPUSD3-201ENST00000383820 TIAM1Q13009 1591 aa28.79■■■□□ 2.2
RPUSD3-201ENST00000383820 ZMYM3Q14202 1370 aa28.77■■■□□ 2.2
RPUSD3-201ENST00000383820 CEP162Q5TB80 1403 aa28.76■■■□□ 2.19
RPUSD3-201ENST00000383820 ADGBQ8N7X0 1667 aa28.74■■■□□ 2.19
RPUSD3-201ENST00000383820 NCOA1Q15788 1441 aa28.72■■■□□ 2.19
RPUSD3-201ENST00000383820 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
RPUSD3-201ENST00000383820 PPP6R1Q9UPN7 881 aa28.71■■■□□ 2.19
RPUSD3-201ENST00000383820 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.19
RPUSD3-201ENST00000383820 ZNF644Q9H582 1327 aaPredicted RBP28.69■■■□□ 2.18
RPUSD3-201ENST00000383820 RTEL1-TNFRSF6BF6WH68 1400 aa28.69■■■□□ 2.18
RPUSD3-201ENST00000383820 GGT6Q6P531 493 aa28.66■■■□□ 2.18
RPUSD3-201ENST00000383820 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
RPUSD3-201ENST00000383820 PTPRKQ15262 1439 aa28.63■■■□□ 2.17
RPUSD3-201ENST00000383820 ZNF142P52746 1687 aaPredicted RBP28.63■■■□□ 2.17
RPUSD3-201ENST00000383820 MYO3AQ8NEV4 1616 aa28.61■■■□□ 2.17
RPUSD3-201ENST00000383820 NCOA2Q15596 1464 aa28.61■■■□□ 2.17
RPUSD3-201ENST00000383820 LTBP4Q8N2S1 1624 aa28.61■■■□□ 2.17
RPUSD3-201ENST00000383820 DHX29Q7Z478 1369 aaKnown RBP28.61■■■□□ 2.17
RPUSD3-201ENST00000383820 RSPH4AQ5TD94 716 aa28.6■■■□□ 2.17
RPUSD3-201ENST00000383820 PLA2R1Q13018 1463 aa28.59■■■□□ 2.17
RPUSD3-201ENST00000383820 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
RPUSD3-201ENST00000383820 CCDC141Q6ZP82 1450 aa28.59■■■□□ 2.17
RPUSD3-201ENST00000383820 CEP170BQ9Y4F5 1589 aaPredicted RBP28.57■■■□□ 2.16
RPUSD3-201ENST00000383820 CAMSAP2Q08AD1 1489 aa28.56■■■□□ 2.16
RPUSD3-201ENST00000383820 FAM135AQ9P2D6 1515 aa28.54■■■□□ 2.16
RPUSD3-201ENST00000383820 PKD2Q13563 968 aa28.54■■■□□ 2.16
RPUSD3-201ENST00000383820 NCKAP5LQ9HCH0 1330 aa28.51■■■□□ 2.15
RPUSD3-201ENST00000383820 TCOF1Q13428 1488 aaKnown RBP28.51■■■□□ 2.15
RPUSD3-201ENST00000383820 ARHGEF5Q12774 1597 aa28.5■■■□□ 2.15
RPUSD3-201ENST00000383820 A2ML1A8K2U0 1454 aa28.48■■■□□ 2.15
RPUSD3-201ENST00000383820 KIF3BO15066 747 aa28.48■■■□□ 2.15
RPUSD3-201ENST00000383820 VPS8Q8N3P4 1428 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms