RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 TROQ12816 1431 aaPredicted RBP30.76■■■□□ 2.51
TMEM41A-202ENST00000382227 EFCAB2Q5VUJ9 269 aa30.76■■■□□ 2.51
TMEM41A-202ENST00000382227 MYO5CQ9NQX4 1742 aa30.75■■■□□ 2.51
TMEM41A-202ENST00000382227 KIF14Q15058 1648 aa30.74■■■□□ 2.51
TMEM41A-202ENST00000382227 CLIP1P30622 1438 aa30.72■■■□□ 2.51
TMEM41A-202ENST00000382227 LRRIQ1Q96JM4 1722 aa30.7■■■□□ 2.5
TMEM41A-202ENST00000382227 RIMS1Q86UR5 1692 aaKnown RBP30.68■■■□□ 2.5
TMEM41A-202ENST00000382227 SIGLEC1Q9BZZ2 1709 aa30.67■■■□□ 2.5
TMEM41A-202ENST00000382227 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
TMEM41A-202ENST00000382227 ARHGAP5Q13017 1502 aa30.64■■■□□ 2.5
TMEM41A-202ENST00000382227 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
TMEM41A-202ENST00000382227 CCDC18Q5T9S5 1454 aa30.62■■■□□ 2.49
TMEM41A-202ENST00000382227 ATP10AO60312 1499 aa30.61■■■□□ 2.49
TMEM41A-202ENST00000382227 LMTK3Q96Q04 1460 aa30.61■■■□□ 2.49
TMEM41A-202ENST00000382227 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
TMEM41A-202ENST00000382227 MLECQ14165 292 aa30.59■■■□□ 2.49
TMEM41A-202ENST00000382227 C9orf84Q5VXU9 1444 aa30.58■■■□□ 2.49
TMEM41A-202ENST00000382227 AFAP1Q8N556 730 aa30.56■■■□□ 2.48
TMEM41A-202ENST00000382227 KDM5CP41229 1560 aa30.55■■■□□ 2.48
TMEM41A-202ENST00000382227 PLPPR3Q6T4P5 718 aa30.54■■■□□ 2.48
TMEM41A-202ENST00000382227 CDC42BPBQ9Y5S2 1711 aa30.53■■■□□ 2.48
TMEM41A-202ENST00000382227 FYCO1Q9BQS8 1478 aa30.52■■■□□ 2.48
TMEM41A-202ENST00000382227 FER1L4A9Z1Z3 1794 aa30.51■■■□□ 2.48
TMEM41A-202ENST00000382227 PREX2Q70Z35 1606 aa30.51■■■□□ 2.47
TMEM41A-202ENST00000382227 ARHGEF12Q9NZN5 1544 aa30.5■■■□□ 2.47
TMEM41A-202ENST00000382227 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
TMEM41A-202ENST00000382227 ABCC1P33527 1531 aa30.44■■■□□ 2.46
TMEM41A-202ENST00000382227 HSPA2P54652 639 aa30.44■■■□□ 2.46
TMEM41A-202ENST00000382227 MLH3Q9UHC1 1453 aa30.44■■■□□ 2.46
TMEM41A-202ENST00000382227 DIP2CQ9Y2E4 1556 aa30.43■■■□□ 2.46
TMEM41A-202ENST00000382227 TRAPPC8Q9Y2L5 1435 aa30.42■■■□□ 2.46
TMEM41A-202ENST00000382227 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
TMEM41A-202ENST00000382227 CDC42BPAQ5VT25 1732 aa30.39■■■□□ 2.46
TMEM41A-202ENST00000382227 ITSN2Q9NZM3 1697 aa30.38■■■□□ 2.45
TMEM41A-202ENST00000382227 ABCA6Q8N139 1617 aa30.37■■■□□ 2.45
TMEM41A-202ENST00000382227 FBXO41Q8TF61 875 aa30.36■■■□□ 2.45
TMEM41A-202ENST00000382227 CEBPAP49715 358 aaPredicted RBP30.34■■■□□ 2.45
TMEM41A-202ENST00000382227 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
TMEM41A-202ENST00000382227 ZNF777Q9ULD5 760 aaPredicted RBP30.31■■■□□ 2.44
TMEM41A-202ENST00000382227 AGLP35573 1532 aa30.31■■■□□ 2.44
TMEM41A-202ENST00000382227 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
TMEM41A-202ENST00000382227 KIDINS220Q9ULH0 1771 aa30.28■■■□□ 2.44
TMEM41A-202ENST00000382227 PREX1Q8TCU6 1659 aa30.27■■■□□ 2.44
TMEM41A-202ENST00000382227 SYCP2Q9BX26 1530 aa30.25■■■□□ 2.43
TMEM41A-202ENST00000382227 MTUS2Q5JR59 1369 aa30.24■■■□□ 2.43
TMEM41A-202ENST00000382227 CFDP1Q9UEE9 299 aaPredicted RBP30.23■■■□□ 2.43
TMEM41A-202ENST00000382227 CCNB3Q8WWL7 1395 aa30.23■■■□□ 2.43
TMEM41A-202ENST00000382227 HNRNPMP52272 730 aaKnown RBP eCLIP30.22■■■□□ 2.43
TMEM41A-202ENST00000382227 ESF1Q9H501 851 aaKnown RBP30.22■■■□□ 2.43
TMEM41A-202ENST00000382227 KIAA1107Q9UPP5 1409 aa30.21■■■□□ 2.43
TMEM41A-202ENST00000382227 SPAG9O60271 1321 aaKnown RBP30.21■■■□□ 2.43
TMEM41A-202ENST00000382227 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
TMEM41A-202ENST00000382227 UHRF1BP1Q6BDS2 1440 aa30.19■■■□□ 2.42
TMEM41A-202ENST00000382227 C3P01024 1663 aa30.16■■■□□ 2.42
TMEM41A-202ENST00000382227 CEP162Q5TB80 1403 aa30.15■■■□□ 2.42
TMEM41A-202ENST00000382227 SETD1BQ9UPS6 1966 aaKnown RBP30.14■■■□□ 2.42
TMEM41A-202ENST00000382227 CNTLNQ9NXG0 1405 aa30.13■■■□□ 2.41
TMEM41A-202ENST00000382227 ATP7AQ04656 1500 aa30.13■■■□□ 2.41
TMEM41A-202ENST00000382227 EHBP1L1Q8N3D4 1523 aa30.12■■■□□ 2.41
TMEM41A-202ENST00000382227 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
TMEM41A-202ENST00000382227 TIAM1Q13009 1591 aa30.09■■■□□ 2.41
TMEM41A-202ENST00000382227 CERKQ8TCT0 537 aa30.07■■■□□ 2.4
TMEM41A-202ENST00000382227 DMRT2Q9Y5R5 561 aa30.07■■■□□ 2.4
TMEM41A-202ENST00000382227 STRCQ7RTU9 1775 aa30.05■■■□□ 2.4
TMEM41A-202ENST00000382227 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
TMEM41A-202ENST00000382227 ZNF644Q9H582 1327 aaPredicted RBP30.05■■■□□ 2.4
TMEM41A-202ENST00000382227 A2MP01023 1474 aa30.05■■■□□ 2.4
TMEM41A-202ENST00000382227 PLXNC1O60486 1568 aa30.04■■■□□ 2.4
TMEM41A-202ENST00000382227 MROH2AA6NES4 1674 aa30.02■■■□□ 2.4
TMEM41A-202ENST00000382227 MBD5Q9P267 1494 aa30.01■■■□□ 2.4
TMEM41A-202ENST00000382227 ZMYM3Q14202 1370 aa30.01■■■□□ 2.39
TMEM41A-202ENST00000382227 NPATQ14207 1427 aa29.99■■■□□ 2.39
TMEM41A-202ENST00000382227 ADGBQ8N7X0 1667 aa29.95■■■□□ 2.38
TMEM41A-202ENST00000382227 GGT6Q6P531 493 aa29.94■■■□□ 2.38
TMEM41A-202ENST00000382227 RTEL1-TNFRSF6BF6WH68 1400 aa29.94■■■□□ 2.38
TMEM41A-202ENST00000382227 PTPRTO14522 1441 aa29.94■■■□□ 2.38
TMEM41A-202ENST00000382227 NCOA2Q15596 1464 aa29.93■■■□□ 2.38
TMEM41A-202ENST00000382227 CLTCQ00610 1675 aaKnown RBP29.92■■■□□ 2.38
TMEM41A-202ENST00000382227 PPP6R1Q9UPN7 881 aa29.9■■■□□ 2.38
TMEM41A-202ENST00000382227 NCOA1Q15788 1441 aa29.89■■■□□ 2.38
TMEM41A-202ENST00000382227 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
TMEM41A-202ENST00000382227 CCDC141Q6ZP82 1450 aa29.87■■■□□ 2.37
TMEM41A-202ENST00000382227 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
TMEM41A-202ENST00000382227 DHX29Q7Z478 1369 aaKnown RBP29.86■■■□□ 2.37
TMEM41A-202ENST00000382227 PTPRKQ15262 1439 aa29.86■■■□□ 2.37
TMEM41A-202ENST00000382227 RSPH4AQ5TD94 716 aa29.85■■■□□ 2.37
TMEM41A-202ENST00000382227 VPS8Q8N3P4 1428 aa29.85■■■□□ 2.37
TMEM41A-202ENST00000382227 CAMSAP1Q5T5Y3 1602 aa29.84■■■□□ 2.37
TMEM41A-202ENST00000382227 MYO3AQ8NEV4 1616 aa29.8■■■□□ 2.36
TMEM41A-202ENST00000382227 LRRC9Q6ZRR7 1453 aa29.79■■■□□ 2.36
TMEM41A-202ENST00000382227 ZNF142P52746 1687 aaPredicted RBP29.78■■■□□ 2.36
TMEM41A-202ENST00000382227 KIF3BO15066 747 aa29.77■■■□□ 2.36
TMEM41A-202ENST00000382227 CEP170BQ9Y4F5 1589 aaPredicted RBP29.76■■■□□ 2.35
TMEM41A-202ENST00000382227 ARHGEF5Q12774 1597 aa29.75■■■□□ 2.35
TMEM41A-202ENST00000382227 LTBP4Q8N2S1 1624 aa29.74■■■□□ 2.35
TMEM41A-202ENST00000382227 NCKAP5LQ9HCH0 1330 aa29.73■■■□□ 2.35
TMEM41A-202ENST00000382227 PLA2R1Q13018 1463 aa29.73■■■□□ 2.35
TMEM41A-202ENST00000382227 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
TMEM41A-202ENST00000382227 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
TMEM41A-202ENST00000382227 MAP3K1Q13233 1512 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms