RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3F-202ENST00000381565 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
APOBEC3F-202ENST00000381565 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
APOBEC3F-202ENST00000381565 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
APOBEC3F-202ENST00000381565 RICTORQ6R327 1708 aa18.67■□□□□ 0.58
APOBEC3F-202ENST00000381565 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
APOBEC3F-202ENST00000381565 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
APOBEC3F-202ENST00000381565 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
APOBEC3F-202ENST00000381565 ARHGEF40Q8TER5 1519 aa18.64■□□□□ 0.58
APOBEC3F-202ENST00000381565 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
APOBEC3F-202ENST00000381565 FANCAO15360 1455 aa18.62■□□□□ 0.57
APOBEC3F-202ENST00000381565 LMTK3Q96Q04 1460 aa18.61■□□□□ 0.57
APOBEC3F-202ENST00000381565 SIGLEC1Q9BZZ2 1709 aa18.59■□□□□ 0.57
APOBEC3F-202ENST00000381565 PLCH2O75038 1416 aa18.58■□□□□ 0.57
APOBEC3F-202ENST00000381565 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
APOBEC3F-202ENST00000381565 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
APOBEC3F-202ENST00000381565 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.56
APOBEC3F-202ENST00000381565 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
APOBEC3F-202ENST00000381565 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
APOBEC3F-202ENST00000381565 RIMS1Q86UR5 1692 aaKnown RBP18.56■□□□□ 0.56
APOBEC3F-202ENST00000381565 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
APOBEC3F-202ENST00000381565 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
APOBEC3F-202ENST00000381565 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
APOBEC3F-202ENST00000381565 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
APOBEC3F-202ENST00000381565 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
APOBEC3F-202ENST00000381565 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
APOBEC3F-202ENST00000381565 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
APOBEC3F-202ENST00000381565 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
APOBEC3F-202ENST00000381565 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
APOBEC3F-202ENST00000381565 ABCC1P33527 1531 aa18.49■□□□□ 0.55
APOBEC3F-202ENST00000381565 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
APOBEC3F-202ENST00000381565 SAMD9LQ8IVG5 1584 aa18.48■□□□□ 0.55
APOBEC3F-202ENST00000381565 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
APOBEC3F-202ENST00000381565 KDM5CP41229 1560 aa18.47■□□□□ 0.55
APOBEC3F-202ENST00000381565 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.54
APOBEC3F-202ENST00000381565 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
APOBEC3F-202ENST00000381565 GPATCH8Q9UKJ3 1502 aaKnown RBP18.45■□□□□ 0.54
APOBEC3F-202ENST00000381565 HSPA2P54652 639 aa18.45■□□□□ 0.54
APOBEC3F-202ENST00000381565 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
APOBEC3F-202ENST00000381565 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
APOBEC3F-202ENST00000381565 MAP3K1Q13233 1512 aa18.43■□□□□ 0.54
APOBEC3F-202ENST00000381565 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
APOBEC3F-202ENST00000381565 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
APOBEC3F-202ENST00000381565 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
APOBEC3F-202ENST00000381565 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
APOBEC3F-202ENST00000381565 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.54
APOBEC3F-202ENST00000381565 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
APOBEC3F-202ENST00000381565 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
APOBEC3F-202ENST00000381565 KIDINS220Q9ULH0 1771 aa18.37■□□□□ 0.53
APOBEC3F-202ENST00000381565 MLECQ14165 292 aa18.37■□□□□ 0.53
APOBEC3F-202ENST00000381565 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
APOBEC3F-202ENST00000381565 ATP10AO60312 1499 aa18.36■□□□□ 0.53
APOBEC3F-202ENST00000381565 CCNB3Q8WWL7 1395 aa18.36■□□□□ 0.53
APOBEC3F-202ENST00000381565 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
APOBEC3F-202ENST00000381565 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
APOBEC3F-202ENST00000381565 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
APOBEC3F-202ENST00000381565 REREQ9P2R6 1566 aa18.31■□□□□ 0.52
APOBEC3F-202ENST00000381565 MLH3Q9UHC1 1453 aa18.31■□□□□ 0.52
APOBEC3F-202ENST00000381565 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
APOBEC3F-202ENST00000381565 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
APOBEC3F-202ENST00000381565 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
APOBEC3F-202ENST00000381565 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
APOBEC3F-202ENST00000381565 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
APOBEC3F-202ENST00000381565 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
APOBEC3F-202ENST00000381565 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
APOBEC3F-202ENST00000381565 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
APOBEC3F-202ENST00000381565 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
APOBEC3F-202ENST00000381565 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
APOBEC3F-202ENST00000381565 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
APOBEC3F-202ENST00000381565 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
APOBEC3F-202ENST00000381565 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
APOBEC3F-202ENST00000381565 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
APOBEC3F-202ENST00000381565 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
APOBEC3F-202ENST00000381565 KCNA4P22459 653 aa18.24■□□□□ 0.51
APOBEC3F-202ENST00000381565 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
APOBEC3F-202ENST00000381565 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
APOBEC3F-202ENST00000381565 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.51
APOBEC3F-202ENST00000381565 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
APOBEC3F-202ENST00000381565 AGLP35573 1532 aa18.2■□□□□ 0.5
APOBEC3F-202ENST00000381565 CROCC2H7BZ55 1655 aa18.2■□□□□ 0.5
APOBEC3F-202ENST00000381565 CCDC141Q6ZP82 1450 aa18.19■□□□□ 0.5
APOBEC3F-202ENST00000381565 C3P01024 1663 aa18.18■□□□□ 0.5
APOBEC3F-202ENST00000381565 UHRF1BP1Q6BDS2 1440 aa18.18■□□□□ 0.5
APOBEC3F-202ENST00000381565 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
APOBEC3F-202ENST00000381565 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
APOBEC3F-202ENST00000381565 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
APOBEC3F-202ENST00000381565 MAST1Q9Y2H9 1570 aa18.15■□□□□ 0.5
APOBEC3F-202ENST00000381565 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
APOBEC3F-202ENST00000381565 APLP2Q06481 763 aa18.12■□□□□ 0.49
APOBEC3F-202ENST00000381565 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
APOBEC3F-202ENST00000381565 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
APOBEC3F-202ENST00000381565 SETD1BQ9UPS6 1966 aaKnown RBP18.11■□□□□ 0.49
APOBEC3F-202ENST00000381565 PTPRTO14522 1441 aa18.11■□□□□ 0.49
APOBEC3F-202ENST00000381565 A2MP01023 1474 aa18.11■□□□□ 0.49
APOBEC3F-202ENST00000381565 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
APOBEC3F-202ENST00000381565 TCOF1Q13428 1488 aaKnown RBP18.1■□□□□ 0.49
APOBEC3F-202ENST00000381565 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
APOBEC3F-202ENST00000381565 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
APOBEC3F-202ENST00000381565 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
APOBEC3F-202ENST00000381565 LTBP4Q8N2S1 1624 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms