RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
RPAIN-202ENST00000381208 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
RPAIN-202ENST00000381208 ARHGEF40Q8TER5 1519 aa21.1■□□□□ 0.97
RPAIN-202ENST00000381208 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
RPAIN-202ENST00000381208 RICTORQ6R327 1708 aa21.1■□□□□ 0.97
RPAIN-202ENST00000381208 ZMYM4Q5VZL5 1548 aa21.09■□□□□ 0.97
RPAIN-202ENST00000381208 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
RPAIN-202ENST00000381208 KIF14Q15058 1648 aa21.08■□□□□ 0.97
RPAIN-202ENST00000381208 SCAPERQ9BY12 1400 aa21.08■□□□□ 0.97
RPAIN-202ENST00000381208 POGZQ7Z3K3 1410 aa21.07■□□□□ 0.96
RPAIN-202ENST00000381208 ADAMTSL3P82987 1691 aa21.06■□□□□ 0.96
RPAIN-202ENST00000381208 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
RPAIN-202ENST00000381208 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
RPAIN-202ENST00000381208 PTPRMP28827 1452 aa21.04■□□□□ 0.96
RPAIN-202ENST00000381208 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
RPAIN-202ENST00000381208 BCORL1Q5H9F3 1711 aa21.03■□□□□ 0.96
RPAIN-202ENST00000381208 FYCO1Q9BQS8 1478 aa21.02■□□□□ 0.95
RPAIN-202ENST00000381208 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
RPAIN-202ENST00000381208 YEATS2Q9ULM3 1422 aa20.99■□□□□ 0.95
RPAIN-202ENST00000381208 PCF11O94913 1555 aaKnown RBP20.99■□□□□ 0.95
RPAIN-202ENST00000381208 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
RPAIN-202ENST00000381208 ZNF518AQ6AHZ1 1483 aa20.98■□□□□ 0.95
RPAIN-202ENST00000381208 ATP10AO60312 1499 aa20.96■□□□□ 0.95
RPAIN-202ENST00000381208 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
RPAIN-202ENST00000381208 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
RPAIN-202ENST00000381208 C9orf84Q5VXU9 1444 aa20.93■□□□□ 0.94
RPAIN-202ENST00000381208 AFAP1Q8N556 730 aa20.91■□□□□ 0.94
RPAIN-202ENST00000381208 KDM5CP41229 1560 aa20.9■□□□□ 0.94
RPAIN-202ENST00000381208 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
RPAIN-202ENST00000381208 PREX2Q70Z35 1606 aa20.89■□□□□ 0.93
RPAIN-202ENST00000381208 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
RPAIN-202ENST00000381208 MLECQ14165 292 aa20.86■□□□□ 0.93
RPAIN-202ENST00000381208 CDC42BPBQ9Y5S2 1711 aa20.86■□□□□ 0.93
RPAIN-202ENST00000381208 RIMS1Q86UR5 1692 aaKnown RBP20.86■□□□□ 0.93
RPAIN-202ENST00000381208 ABCC1P33527 1531 aa20.85■□□□□ 0.93
RPAIN-202ENST00000381208 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.93
RPAIN-202ENST00000381208 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
RPAIN-202ENST00000381208 REREQ9P2R6 1566 aa20.82■□□□□ 0.92
RPAIN-202ENST00000381208 TRAPPC8Q9Y2L5 1435 aa20.82■□□□□ 0.92
RPAIN-202ENST00000381208 GPATCH8Q9UKJ3 1502 aaKnown RBP20.81■□□□□ 0.92
RPAIN-202ENST00000381208 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
RPAIN-202ENST00000381208 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
RPAIN-202ENST00000381208 LMTK3Q96Q04 1460 aa20.8■□□□□ 0.92
RPAIN-202ENST00000381208 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
RPAIN-202ENST00000381208 CDC42BPAQ5VT25 1732 aa20.79■□□□□ 0.92
RPAIN-202ENST00000381208 CCNB3Q8WWL7 1395 aa20.79■□□□□ 0.92
RPAIN-202ENST00000381208 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
RPAIN-202ENST00000381208 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
RPAIN-202ENST00000381208 FER1L4A9Z1Z3 1794 aa20.78■□□□□ 0.92
RPAIN-202ENST00000381208 ZNF777Q9ULD5 760 aaPredicted RBP20.78■□□□□ 0.92
RPAIN-202ENST00000381208 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
RPAIN-202ENST00000381208 ITSN2Q9NZM3 1697 aa20.77■□□□□ 0.92
RPAIN-202ENST00000381208 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.92
RPAIN-202ENST00000381208 AGLP35573 1532 aa20.77■□□□□ 0.92
RPAIN-202ENST00000381208 ESF1Q9H501 851 aaKnown RBP20.74■□□□□ 0.91
RPAIN-202ENST00000381208 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
RPAIN-202ENST00000381208 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
RPAIN-202ENST00000381208 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
RPAIN-202ENST00000381208 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
RPAIN-202ENST00000381208 SYCP2Q9BX26 1530 aa20.71■□□□□ 0.91
RPAIN-202ENST00000381208 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.91
RPAIN-202ENST00000381208 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
RPAIN-202ENST00000381208 CNTLNQ9NXG0 1405 aa20.69■□□□□ 0.9
RPAIN-202ENST00000381208 HSPA2P54652 639 aa20.67■□□□□ 0.9
RPAIN-202ENST00000381208 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
RPAIN-202ENST00000381208 CEBPAP49715 358 aaPredicted RBP20.66■□□□□ 0.9
RPAIN-202ENST00000381208 UHRF1BP1Q6BDS2 1440 aa20.63■□□□□ 0.89
RPAIN-202ENST00000381208 RSPH4AQ5TD94 716 aa20.63■□□□□ 0.89
RPAIN-202ENST00000381208 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
RPAIN-202ENST00000381208 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
RPAIN-202ENST00000381208 PREX1Q8TCU6 1659 aa20.62■□□□□ 0.89
RPAIN-202ENST00000381208 FBXO41Q8TF61 875 aa20.62■□□□□ 0.89
RPAIN-202ENST00000381208 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
RPAIN-202ENST00000381208 A2MP01023 1474 aa20.6■□□□□ 0.89
RPAIN-202ENST00000381208 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
RPAIN-202ENST00000381208 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
RPAIN-202ENST00000381208 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
RPAIN-202ENST00000381208 MBD5Q9P267 1494 aa20.58■□□□□ 0.89
RPAIN-202ENST00000381208 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.88
RPAIN-202ENST00000381208 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.88
RPAIN-202ENST00000381208 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.88
RPAIN-202ENST00000381208 SUPT6HQ7KZ85 1726 aaKnown RBP20.58■□□□□ 0.88
RPAIN-202ENST00000381208 PLXNC1O60486 1568 aa20.56■□□□□ 0.88
RPAIN-202ENST00000381208 NPATQ14207 1427 aa20.55■□□□□ 0.88
RPAIN-202ENST00000381208 C3P01024 1663 aa20.54■□□□□ 0.88
RPAIN-202ENST00000381208 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
RPAIN-202ENST00000381208 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
RPAIN-202ENST00000381208 CCDC141Q6ZP82 1450 aa20.53■□□□□ 0.88
RPAIN-202ENST00000381208 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
RPAIN-202ENST00000381208 MROH2AA6NES4 1674 aa20.52■□□□□ 0.88
RPAIN-202ENST00000381208 ADGBQ8N7X0 1667 aa20.51■□□□□ 0.87
RPAIN-202ENST00000381208 GGT6Q6P531 493 aa20.51■□□□□ 0.87
RPAIN-202ENST00000381208 RNF39Q9H2S5 420 aa20.51■□□□□ 0.87
RPAIN-202ENST00000381208 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
RPAIN-202ENST00000381208 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
RPAIN-202ENST00000381208 TSPY4P0CV99 314 aa20.49■□□□□ 0.87
RPAIN-202ENST00000381208 TSPY10P0CW01 314 aa20.49■□□□□ 0.87
RPAIN-202ENST00000381208 CERKQ8TCT0 537 aa20.46■□□□□ 0.87
RPAIN-202ENST00000381208 PTPRTO14522 1441 aa20.45■□□□□ 0.86
RPAIN-202ENST00000381208 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms