RNA–Protein interactions for RNA: ENST00000381106.4

FAM239B-201, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 1,099 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-201ENST00000381106 POGZQ7Z3K3 1410 aa28.85■■■□□ 2.21
FAM239B-201ENST00000381106 ARHGEF40Q8TER5 1519 aa28.84■■■□□ 2.21
FAM239B-201ENST00000381106 MAGI2Q86UL8 1455 aa28.82■■■□□ 2.2
FAM239B-201ENST00000381106 ARID4BQ4LE39 1312 aaPredicted RBP28.81■■■□□ 2.2
FAM239B-201ENST00000381106 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
FAM239B-201ENST00000381106 ARHGAP5Q13017 1502 aa28.8■■■□□ 2.2
FAM239B-201ENST00000381106 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
FAM239B-201ENST00000381106 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
FAM239B-201ENST00000381106 ZFYVE16Q7Z3T8 1539 aa28.75■■■□□ 2.19
FAM239B-201ENST00000381106 CDC42BPAQ5VT25 1732 aa28.75■■■□□ 2.19
FAM239B-201ENST00000381106 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
FAM239B-201ENST00000381106 YEATS2Q9ULM3 1422 aa28.74■■■□□ 2.19
FAM239B-201ENST00000381106 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
FAM239B-201ENST00000381106 ADAMTSL3P82987 1691 aa28.71■■■□□ 2.19
FAM239B-201ENST00000381106 TIAM1Q13009 1591 aa28.7■■■□□ 2.18
FAM239B-201ENST00000381106 KDM5CP41229 1560 aa28.68■■■□□ 2.18
FAM239B-201ENST00000381106 MTUS2Q5JR59 1369 aa28.68■■■□□ 2.18
FAM239B-201ENST00000381106 BCORL1Q5H9F3 1711 aa28.68■■■□□ 2.18
FAM239B-201ENST00000381106 ABCC1P33527 1531 aa28.66■■■□□ 2.18
FAM239B-201ENST00000381106 GPATCH8Q9UKJ3 1502 aaKnown RBP28.66■■■□□ 2.18
FAM239B-201ENST00000381106 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
FAM239B-201ENST00000381106 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
FAM239B-201ENST00000381106 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.17
FAM239B-201ENST00000381106 ATP10AO60312 1499 aa28.63■■■□□ 2.17
FAM239B-201ENST00000381106 PTPRMP28827 1452 aa28.61■■■□□ 2.17
FAM239B-201ENST00000381106 MYT1LQ9UL68 1186 aa28.6■■■□□ 2.17
FAM239B-201ENST00000381106 ITSN2Q9NZM3 1697 aa28.6■■■□□ 2.17
FAM239B-201ENST00000381106 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
FAM239B-201ENST00000381106 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
FAM239B-201ENST00000381106 SUPT6HQ7KZ85 1726 aaKnown RBP28.59■■■□□ 2.17
FAM239B-201ENST00000381106 SIGLEC1Q9BZZ2 1709 aa28.59■■■□□ 2.17
FAM239B-201ENST00000381106 CCNB3Q8WWL7 1395 aa28.59■■■□□ 2.17
FAM239B-201ENST00000381106 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
FAM239B-201ENST00000381106 MADDQ8WXG6 1647 aa28.58■■■□□ 2.17
FAM239B-201ENST00000381106 HECW2Q9P2P5 1572 aa28.57■■■□□ 2.16
FAM239B-201ENST00000381106 SAMD9LQ8IVG5 1584 aa28.56■■■□□ 2.16
FAM239B-201ENST00000381106 MLECQ14165 292 aa28.54■■■□□ 2.16
FAM239B-201ENST00000381106 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
FAM239B-201ENST00000381106 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
FAM239B-201ENST00000381106 CFDP1Q9UEE9 299 aaPredicted RBP28.53■■■□□ 2.16
FAM239B-201ENST00000381106 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
FAM239B-201ENST00000381106 DIP2CQ9Y2E4 1556 aa28.51■■■□□ 2.15
FAM239B-201ENST00000381106 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
FAM239B-201ENST00000381106 NCOA2Q15596 1464 aa28.5■■■□□ 2.15
FAM239B-201ENST00000381106 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
FAM239B-201ENST00000381106 SYCP2Q9BX26 1530 aa28.49■■■□□ 2.15
FAM239B-201ENST00000381106 ABCA6Q8N139 1617 aa28.47■■■□□ 2.15
FAM239B-201ENST00000381106 RIMS1Q86UR5 1692 aaKnown RBP28.45■■■□□ 2.14
FAM239B-201ENST00000381106 HNRNPMP52272 730 aaKnown RBP eCLIP28.44■■■□□ 2.14
FAM239B-201ENST00000381106 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
FAM239B-201ENST00000381106 KIDINS220Q9ULH0 1771 aa28.43■■■□□ 2.14
FAM239B-201ENST00000381106 AGLP35573 1532 aa28.41■■■□□ 2.14
FAM239B-201ENST00000381106 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
FAM239B-201ENST00000381106 ZNF644Q9H582 1327 aaPredicted RBP28.38■■■□□ 2.13
FAM239B-201ENST00000381106 MBD5Q9P267 1494 aa28.37■■■□□ 2.13
FAM239B-201ENST00000381106 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
FAM239B-201ENST00000381106 ATP7AQ04656 1500 aa28.34■■■□□ 2.13
FAM239B-201ENST00000381106 INO80Q9ULG1 1556 aaPredicted RBP28.34■■■□□ 2.13
FAM239B-201ENST00000381106 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.13
FAM239B-201ENST00000381106 CAMSAP2Q08AD1 1489 aa28.32■■■□□ 2.12
FAM239B-201ENST00000381106 LMTK3Q96Q04 1460 aa28.3■■■□□ 2.12
FAM239B-201ENST00000381106 APLP2Q06481 763 aa28.29■■■□□ 2.12
FAM239B-201ENST00000381106 CEBPAP49715 358 aaPredicted RBP28.28■■■□□ 2.12
FAM239B-201ENST00000381106 ILDR1Q86SU0 546 aaPredicted RBP28.27■■■□□ 2.12
FAM239B-201ENST00000381106 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
FAM239B-201ENST00000381106 MYOM3Q5VTT5 1437 aa28.26■■■□□ 2.12
FAM239B-201ENST00000381106 ARHGEF5Q12774 1597 aa28.26■■■□□ 2.11
FAM239B-201ENST00000381106 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
FAM239B-201ENST00000381106 MIA2Q96PC5 1412 aa28.26■■■□□ 2.11
FAM239B-201ENST00000381106 PLXNC1O60486 1568 aa28.25■■■□□ 2.11
FAM239B-201ENST00000381106 A2MP01023 1474 aa28.24■■■□□ 2.11
FAM239B-201ENST00000381106 RSPH4AQ5TD94 716 aa28.24■■■□□ 2.11
FAM239B-201ENST00000381106 CCDC141Q6ZP82 1450 aa28.23■■■□□ 2.11
FAM239B-201ENST00000381106 HSPA2P54652 639 aa28.21■■■□□ 2.11
FAM239B-201ENST00000381106 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.11
FAM239B-201ENST00000381106 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
FAM239B-201ENST00000381106 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
FAM239B-201ENST00000381106 MAST1Q9Y2H9 1570 aa28.12■■■□□ 2.09
FAM239B-201ENST00000381106 PTPN23Q9H3S7 1636 aa28.12■■■□□ 2.09
FAM239B-201ENST00000381106 C3P01024 1663 aa28.1■■■□□ 2.09
FAM239B-201ENST00000381106 PREX1Q8TCU6 1659 aa28.09■■■□□ 2.09
FAM239B-201ENST00000381106 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
FAM239B-201ENST00000381106 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
FAM239B-201ENST00000381106 TSPY4P0CV99 314 aa28.08■■■□□ 2.09
FAM239B-201ENST00000381106 TSPY10P0CW01 314 aa28.08■■■□□ 2.09
FAM239B-201ENST00000381106 GGT6Q6P531 493 aa28.08■■■□□ 2.09
FAM239B-201ENST00000381106 PPP6R1Q9UPN7 881 aa28.08■■■□□ 2.09
FAM239B-201ENST00000381106 CROCC2H7BZ55 1655 aa28.07■■■□□ 2.08
FAM239B-201ENST00000381106 MROH2AA6NES4 1674 aa28.07■■■□□ 2.08
FAM239B-201ENST00000381106 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
FAM239B-201ENST00000381106 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
FAM239B-201ENST00000381106 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
FAM239B-201ENST00000381106 DNMT1P26358 1616 aaKnown RBP28.02■■■□□ 2.08
FAM239B-201ENST00000381106 SHANK2Q9UPX8 1470 aa28.02■■■□□ 2.08
FAM239B-201ENST00000381106 NPATQ14207 1427 aa28.01■■■□□ 2.08
FAM239B-201ENST00000381106 CLTCQ00610 1675 aaKnown RBP27.97■■■□□ 2.07
FAM239B-201ENST00000381106 KIF3BO15066 747 aa27.97■■■□□ 2.07
FAM239B-201ENST00000381106 FAM135AQ9P2D6 1515 aa27.95■■■□□ 2.06
FAM239B-201ENST00000381106 ABCC5O15440 1437 aa27.93■■■□□ 2.06
FAM239B-201ENST00000381106 DMRT2Q9Y5R5 561 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms