RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CDK11AQ9UQ88 783 aaPredicted RBP38.08■■■■□ 3.69
U2AF1-202ENST00000380276 PCF11O94913 1555 aaKnown RBP38.06■■■■□ 3.68
U2AF1-202ENST00000380276 MYO5CQ9NQX4 1742 aa38.06■■■■□ 3.68
U2AF1-202ENST00000380276 MLECQ14165 292 aa38.05■■■■□ 3.68
U2AF1-202ENST00000380276 MAGI2Q86UL8 1455 aa38.04■■■■□ 3.68
U2AF1-202ENST00000380276 SIGLEC1Q9BZZ2 1709 aa38.01■■■■□ 3.68
U2AF1-202ENST00000380276 EFCAB2Q5VUJ9 269 aa38.01■■■■□ 3.68
U2AF1-202ENST00000380276 KIF14Q15058 1648 aa38.01■■■■□ 3.67
U2AF1-202ENST00000380276 LMTK3Q96Q04 1460 aa37.99■■■■□ 3.67
U2AF1-202ENST00000380276 CLIP1P30622 1438 aa37.95■■■■□ 3.67
U2AF1-202ENST00000380276 TROQ12816 1431 aaPredicted RBP37.95■■■■□ 3.67
U2AF1-202ENST00000380276 ARHGAP5Q13017 1502 aa37.93■■■■□ 3.66
U2AF1-202ENST00000380276 FER1L4A9Z1Z3 1794 aa37.91■■■■□ 3.66
U2AF1-202ENST00000380276 MYT1LQ9UL68 1186 aa37.9■■■■□ 3.66
U2AF1-202ENST00000380276 LRRIQ1Q96JM4 1722 aa37.9■■■■□ 3.66
U2AF1-202ENST00000380276 ATP10AO60312 1499 aa37.88■■■■□ 3.65
U2AF1-202ENST00000380276 HSPA2P54652 639 aa37.87■■■■□ 3.65
U2AF1-202ENST00000380276 FBXO41Q8TF61 875 aa37.87■■■■□ 3.65
U2AF1-202ENST00000380276 C9orf84Q5VXU9 1444 aa37.87■■■■□ 3.65
U2AF1-202ENST00000380276 ZNF518AQ6AHZ1 1483 aa37.83■■■■□ 3.65
U2AF1-202ENST00000380276 AFAP1Q8N556 730 aa37.79■■■■□ 3.64
U2AF1-202ENST00000380276 ARHGEF12Q9NZN5 1544 aa37.76■■■■□ 3.63
U2AF1-202ENST00000380276 CCDC18Q5T9S5 1454 aa37.75■■■■□ 3.63
U2AF1-202ENST00000380276 CDC42BPBQ9Y5S2 1711 aa37.73■■■■□ 3.63
U2AF1-202ENST00000380276 KDM5CP41229 1560 aa37.72■■■■□ 3.63
U2AF1-202ENST00000380276 CASKIN1Q8WXD9 1431 aa37.72■■■■□ 3.63
U2AF1-202ENST00000380276 PREX2Q70Z35 1606 aa37.69■■■■□ 3.62
U2AF1-202ENST00000380276 CEBPAP49715 358 aaPredicted RBP37.66■■■■□ 3.62
U2AF1-202ENST00000380276 DIP2CQ9Y2E4 1556 aa37.66■■■■□ 3.62
U2AF1-202ENST00000380276 ABCC1P33527 1531 aa37.61■■■■□ 3.61
U2AF1-202ENST00000380276 PREX1Q8TCU6 1659 aa37.61■■■■□ 3.61
U2AF1-202ENST00000380276 ABCA6Q8N139 1617 aa37.61■■■■□ 3.61
U2AF1-202ENST00000380276 ITSN2Q9NZM3 1697 aa37.6■■■■□ 3.61
U2AF1-202ENST00000380276 TRAPPC8Q9Y2L5 1435 aa37.59■■■■□ 3.61
U2AF1-202ENST00000380276 FYCO1Q9BQS8 1478 aa37.58■■■■□ 3.61
U2AF1-202ENST00000380276 MLH3Q9UHC1 1453 aa37.57■■■■□ 3.6
U2AF1-202ENST00000380276 CDC42BPAQ5VT25 1732 aa37.56■■■■□ 3.6
U2AF1-202ENST00000380276 ZNF777Q9ULD5 760 aaPredicted RBP37.55■■■■□ 3.6
U2AF1-202ENST00000380276 REREQ9P2R6 1566 aa37.54■■■■□ 3.6
U2AF1-202ENST00000380276 ESF1Q9H501 851 aaKnown RBP37.53■■■■□ 3.6
U2AF1-202ENST00000380276 UHRF1BP1Q6BDS2 1440 aa37.48■■■■□ 3.59
U2AF1-202ENST00000380276 KIDINS220Q9ULH0 1771 aa37.45■■■■□ 3.58
U2AF1-202ENST00000380276 AGLP35573 1532 aa37.43■■■■□ 3.58
U2AF1-202ENST00000380276 CERKQ8TCT0 537 aa37.43■■■■□ 3.58
U2AF1-202ENST00000380276 C3P01024 1663 aa37.42■■■■□ 3.58
U2AF1-202ENST00000380276 SAMD9LQ8IVG5 1584 aa37.41■■■■□ 3.58
U2AF1-202ENST00000380276 SYCP2Q9BX26 1530 aa37.4■■■■□ 3.58
U2AF1-202ENST00000380276 GPATCH8Q9UKJ3 1502 aaKnown RBP37.37■■■■□ 3.57
U2AF1-202ENST00000380276 HNRNPMP52272 730 aaKnown RBP eCLIP37.36■■■■□ 3.57
U2AF1-202ENST00000380276 SPAG9O60271 1321 aaKnown RBP37.35■■■■□ 3.57
U2AF1-202ENST00000380276 SETD1BQ9UPS6 1966 aaKnown RBP37.33■■■■□ 3.57
U2AF1-202ENST00000380276 DMRT2Q9Y5R5 561 aa37.33■■■■□ 3.57
U2AF1-202ENST00000380276 CFDP1Q9UEE9 299 aaPredicted RBP37.32■■■■□ 3.56
U2AF1-202ENST00000380276 STRCQ7RTU9 1775 aa37.32■■■■□ 3.56
U2AF1-202ENST00000380276 MTUS2Q5JR59 1369 aa37.31■■■■□ 3.56
U2AF1-202ENST00000380276 CCNB3Q8WWL7 1395 aa37.31■■■■□ 3.56
U2AF1-202ENST00000380276 CNTLNQ9NXG0 1405 aa37.29■■■■□ 3.56
U2AF1-202ENST00000380276 SUPT6HQ7KZ85 1726 aaKnown RBP37.27■■■■□ 3.56
U2AF1-202ENST00000380276 PLEKHH2Q8IVE3 1493 aa37.25■■■■□ 3.55
U2AF1-202ENST00000380276 ATP7AQ04656 1500 aa37.24■■■■□ 3.55
U2AF1-202ENST00000380276 KIAA1107Q9UPP5 1409 aa37.2■■■■□ 3.55
U2AF1-202ENST00000380276 INO80Q9ULG1 1556 aaPredicted RBP37.17■■■■□ 3.54
U2AF1-202ENST00000380276 MROH2AA6NES4 1674 aa37.16■■■■□ 3.54
U2AF1-202ENST00000380276 A2MP01023 1474 aa37.15■■■■□ 3.54
U2AF1-202ENST00000380276 EHBP1L1Q8N3D4 1523 aa37.13■■■■□ 3.53
U2AF1-202ENST00000380276 ZMYM3Q14202 1370 aa37.13■■■■□ 3.53
U2AF1-202ENST00000380276 CLTCQ00610 1675 aaKnown RBP37.12■■■■□ 3.53
U2AF1-202ENST00000380276 PTPRTO14522 1441 aa37.12■■■■□ 3.53
U2AF1-202ENST00000380276 TIAM1Q13009 1591 aa37.12■■■■□ 3.53
U2AF1-202ENST00000380276 GGT6Q6P531 493 aa37.11■■■■□ 3.53
U2AF1-202ENST00000380276 PLXNC1O60486 1568 aa37.09■■■■□ 3.53
U2AF1-202ENST00000380276 NPATQ14207 1427 aa37.09■■■■□ 3.53
U2AF1-202ENST00000380276 ZNF644Q9H582 1327 aaPredicted RBP37.09■■■■□ 3.53
U2AF1-202ENST00000380276 NCOA1Q15788 1441 aa37.06■■■■□ 3.52
U2AF1-202ENST00000380276 CEP162Q5TB80 1403 aa37.06■■■■□ 3.52
U2AF1-202ENST00000380276 CAMSAP1Q5T5Y3 1602 aa37.04■■■■□ 3.52
U2AF1-202ENST00000380276 ADGBQ8N7X0 1667 aa37.04■■■■□ 3.52
U2AF1-202ENST00000380276 MYO3AQ8NEV4 1616 aa36.96■■■■□ 3.51
U2AF1-202ENST00000380276 MBD5Q9P267 1494 aa36.95■■■■□ 3.51
U2AF1-202ENST00000380276 NCKAP5LQ9HCH0 1330 aa36.94■■■■□ 3.5
U2AF1-202ENST00000380276 PTPRKQ15262 1439 aa36.92■■■■□ 3.5
U2AF1-202ENST00000380276 LTBP4Q8N2S1 1624 aa36.9■■■■□ 3.5
U2AF1-202ENST00000380276 ZNF142P52746 1687 aaPredicted RBP36.9■■■■□ 3.5
U2AF1-202ENST00000380276 RTEL1-TNFRSF6BF6WH68 1400 aa36.89■■■■□ 3.5
U2AF1-202ENST00000380276 CEP170BQ9Y4F5 1589 aaPredicted RBP36.89■■■■□ 3.5
U2AF1-202ENST00000380276 NCOA2Q15596 1464 aa36.88■■■■□ 3.5
U2AF1-202ENST00000380276 PPP6R1Q9UPN7 881 aa36.87■■■■□ 3.49
U2AF1-202ENST00000380276 CAMSAP2Q08AD1 1489 aa36.87■■■■□ 3.49
U2AF1-202ENST00000380276 CCDC141Q6ZP82 1450 aa36.86■■■■□ 3.49
U2AF1-202ENST00000380276 DHX29Q7Z478 1369 aaKnown RBP36.85■■■■□ 3.49
U2AF1-202ENST00000380276 KIF3BO15066 747 aa36.82■■■■□ 3.48
U2AF1-202ENST00000380276 PKD2Q13563 968 aa36.8■■■■□ 3.48
U2AF1-202ENST00000380276 PLA2R1Q13018 1463 aa36.8■■■■□ 3.48
U2AF1-202ENST00000380276 ZNF335Q9H4Z2 1342 aaPredicted RBP36.79■■■■□ 3.48
U2AF1-202ENST00000380276 DISP3Q9P2K9 1392 aa36.78■■■■□ 3.48
U2AF1-202ENST00000380276 IQSEC2Q5JU85 1478 aa36.78■■■■□ 3.48
U2AF1-202ENST00000380276 RSPH4AQ5TD94 716 aa36.74■■■■□ 3.47
U2AF1-202ENST00000380276 A2ML1A8K2U0 1454 aa36.72■■■■□ 3.47
U2AF1-202ENST00000380276 TCOF1Q13428 1488 aaKnown RBP36.72■■■■□ 3.47
U2AF1-202ENST00000380276 KDM5DQ9BY66 1539 aa36.72■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms