RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
NHLRC3-202ENST00000379600 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
NHLRC3-202ENST00000379600 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
NHLRC3-202ENST00000379600 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
NHLRC3-202ENST00000379600 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
NHLRC3-202ENST00000379600 RPRD2Q5VT52 1461 aaKnown RBP12.9□□□□□ -0.34
NHLRC3-202ENST00000379600 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
NHLRC3-202ENST00000379600 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
NHLRC3-202ENST00000379600 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
NHLRC3-202ENST00000379600 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
NHLRC3-202ENST00000379600 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
NHLRC3-202ENST00000379600 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
NHLRC3-202ENST00000379600 WDR62O43379 1518 aa12.88□□□□□ -0.35
NHLRC3-202ENST00000379600 BCORL1Q5H9F3 1711 aa12.85□□□□□ -0.35
NHLRC3-202ENST00000379600 DAPK1P53355 1430 aa12.85□□□□□ -0.35
NHLRC3-202ENST00000379600 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
NHLRC3-202ENST00000379600 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
NHLRC3-202ENST00000379600 IQGAP2Q13576 1575 aa12.84□□□□□ -0.35
NHLRC3-202ENST00000379600 DHX29Q7Z478 1369 aaKnown RBP12.84□□□□□ -0.35
NHLRC3-202ENST00000379600 ABCC5O15440 1437 aa12.83□□□□□ -0.36
NHLRC3-202ENST00000379600 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
NHLRC3-202ENST00000379600 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
NHLRC3-202ENST00000379600 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
NHLRC3-202ENST00000379600 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
NHLRC3-202ENST00000379600 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
NHLRC3-202ENST00000379600 PZPP20742 1482 aa12.81□□□□□ -0.36
NHLRC3-202ENST00000379600 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-202ENST00000379600 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
NHLRC3-202ENST00000379600 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
NHLRC3-202ENST00000379600 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-202ENST00000379600 KDM5CP41229 1560 aa12.77□□□□□ -0.37
NHLRC3-202ENST00000379600 KIF14Q15058 1648 aa12.75□□□□□ -0.37
NHLRC3-202ENST00000379600 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
NHLRC3-202ENST00000379600 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
NHLRC3-202ENST00000379600 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
NHLRC3-202ENST00000379600 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
NHLRC3-202ENST00000379600 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
NHLRC3-202ENST00000379600 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
NHLRC3-202ENST00000379600 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 USP47Q96K76 1375 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
NHLRC3-202ENST00000379600 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
NHLRC3-202ENST00000379600 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
NHLRC3-202ENST00000379600 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
NHLRC3-202ENST00000379600 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.38
NHLRC3-202ENST00000379600 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
NHLRC3-202ENST00000379600 KIAA1107Q9UPP5 1409 aa12.7□□□□□ -0.38
NHLRC3-202ENST00000379600 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
NHLRC3-202ENST00000379600 NBR1Q14596 966 aa12.68□□□□□ -0.38
NHLRC3-202ENST00000379600 E9PCH4 1651 aa12.68□□□□□ -0.38
NHLRC3-202ENST00000379600 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
NHLRC3-202ENST00000379600 ADGRL2O95490 1459 aa12.67□□□□□ -0.38
NHLRC3-202ENST00000379600 LRPPRCP42704 1394 aaKnown RBP12.67□□□□□ -0.38
NHLRC3-202ENST00000379600 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
NHLRC3-202ENST00000379600 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
NHLRC3-202ENST00000379600 RALGAPBQ86X10 1494 aa12.66□□□□□ -0.38
NHLRC3-202ENST00000379600 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 POLR3GLQ9BT43 218 aa12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 ZNF326Q5BKZ1 582 aaKnown RBP12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
NHLRC3-202ENST00000379600 ADCY10Q96PN6 1610 aa12.65□□□□□ -0.39
NHLRC3-202ENST00000379600 PKD2Q13563 968 aa12.64□□□□□ -0.39
NHLRC3-202ENST00000379600 ZNF608Q9ULD9 1512 aaPredicted RBP12.64□□□□□ -0.39
NHLRC3-202ENST00000379600 KIAA0586Q9BVV6 1533 aa12.63□□□□□ -0.39
NHLRC3-202ENST00000379600 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
NHLRC3-202ENST00000379600 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
NHLRC3-202ENST00000379600 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
NHLRC3-202ENST00000379600 ROCK2O75116 1388 aaKnown RBP12.6□□□□□ -0.39
NHLRC3-202ENST00000379600 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
NHLRC3-202ENST00000379600 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
NHLRC3-202ENST00000379600 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
NHLRC3-202ENST00000379600 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
NHLRC3-202ENST00000379600 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
NHLRC3-202ENST00000379600 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
NHLRC3-202ENST00000379600 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
NHLRC3-202ENST00000379600 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
NHLRC3-202ENST00000379600 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
NHLRC3-202ENST00000379600 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
NHLRC3-202ENST00000379600 KDM5DQ9BY66 1539 aa12.58□□□□□ -0.4
NHLRC3-202ENST00000379600 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
NHLRC3-202ENST00000379600 MYBBP1AQ9BQG0 1328 aaKnown RBP12.58□□□□□ -0.4
NHLRC3-202ENST00000379600 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
NHLRC3-202ENST00000379600 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
NHLRC3-202ENST00000379600 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
NHLRC3-202ENST00000379600 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
NHLRC3-202ENST00000379600 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-202ENST00000379600 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-202ENST00000379600 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
NHLRC3-202ENST00000379600 NUP155O75694 1391 aa12.54□□□□□ -0.4
NHLRC3-202ENST00000379600 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
NHLRC3-202ENST00000379600 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
NHLRC3-202ENST00000379600 PTPRGP23470 1445 aa12.54□□□□□ -0.4
NHLRC3-202ENST00000379600 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 RALBP1Q15311 655 aa12.53□□□□□ -0.4
NHLRC3-202ENST00000379600 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms