RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 PLCH2O75038 1416 aa37.76■■■■□ 3.64
TM6SF1-204ENST00000379390 ARAP3Q8WWN8 1544 aa37.73■■■■□ 3.63
TM6SF1-204ENST00000379390 FANCAO15360 1455 aa37.68■■■■□ 3.62
TM6SF1-204ENST00000379390 CFAP74Q9C0B2 1584 aa37.67■■■■□ 3.62
TM6SF1-204ENST00000379390 CFDP1Q9UEE9 299 aaPredicted RBP37.66■■■■□ 3.62
TM6SF1-204ENST00000379390 FGD6Q6ZV73 1430 aa37.65■■■■□ 3.62
TM6SF1-204ENST00000379390 SAMD9LQ8IVG5 1584 aa37.63■■■■□ 3.62
TM6SF1-204ENST00000379390 TEX14Q8IWB6 1497 aa37.62■■■■□ 3.61
TM6SF1-204ENST00000379390 PTPN23Q9H3S7 1636 aa37.62■■■■□ 3.61
TM6SF1-204ENST00000379390 MIA2Q96PC5 1412 aa37.61■■■■□ 3.61
TM6SF1-204ENST00000379390 ZNF777Q9ULD5 760 aaPredicted RBP37.61■■■■□ 3.61
TM6SF1-204ENST00000379390 EFCAB2Q5VUJ9 269 aa37.58■■■■□ 3.61
TM6SF1-204ENST00000379390 CAMSAP2Q08AD1 1489 aa37.57■■■■□ 3.6
TM6SF1-204ENST00000379390 ZNF644Q9H582 1327 aaPredicted RBP37.55■■■■□ 3.6
TM6SF1-204ENST00000379390 NEO1Q92859 1461 aa37.55■■■■□ 3.6
TM6SF1-204ENST00000379390 ABCC1P33527 1531 aa37.53■■■■□ 3.6
TM6SF1-204ENST00000379390 AKNAQ7Z591 1439 aa37.52■■■■□ 3.6
TM6SF1-204ENST00000379390 SYCP2Q9BX26 1530 aa37.5■■■■□ 3.59
TM6SF1-204ENST00000379390 RRBP1Q9P2E9 1410 aaKnown RBP37.5■■■■□ 3.59
TM6SF1-204ENST00000379390 ADGRL1O94910 1474 aa37.49■■■■□ 3.59
TM6SF1-204ENST00000379390 TCOF1Q13428 1488 aaKnown RBP37.49■■■■□ 3.59
TM6SF1-204ENST00000379390 FAM50AQ14320 339 aaKnown RBP37.44■■■■□ 3.58
TM6SF1-204ENST00000379390 PLEKHH2Q8IVE3 1493 aa37.44■■■■□ 3.58
TM6SF1-204ENST00000379390 ARHGEF12Q9NZN5 1544 aa37.44■■■■□ 3.58
TM6SF1-204ENST00000379390 SCAPERQ9BY12 1400 aa37.4■■■■□ 3.58
TM6SF1-204ENST00000379390 KIAA1107Q9UPP5 1409 aa37.38■■■■□ 3.57
TM6SF1-204ENST00000379390 HNRNPMP52272 730 aaKnown RBP eCLIP37.37■■■■□ 3.57
TM6SF1-204ENST00000379390 RICTORQ6R327 1708 aa37.37■■■■□ 3.57
TM6SF1-204ENST00000379390 MBD5Q9P267 1494 aa37.36■■■■□ 3.57
TM6SF1-204ENST00000379390 DNMT1P26358 1616 aaKnown RBP37.35■■■■□ 3.57
TM6SF1-204ENST00000379390 ARHGEF5Q12774 1597 aa37.35■■■■□ 3.57
TM6SF1-204ENST00000379390 CROCC2H7BZ55 1655 aa37.33■■■■□ 3.57
TM6SF1-204ENST00000379390 TRAPPC8Q9Y2L5 1435 aa37.33■■■■□ 3.57
TM6SF1-204ENST00000379390 KDM6BO15054 1643 aa37.33■■■■□ 3.57
TM6SF1-204ENST00000379390 DENND4BO75064 1496 aaPredicted RBP37.32■■■■□ 3.56
TM6SF1-204ENST00000379390 COL17A1Q9UMD9 1497 aaPredicted RBP37.32■■■■□ 3.56
TM6SF1-204ENST00000379390 FRMPD1Q5SYB0 1578 aa37.32■■■■□ 3.56
TM6SF1-204ENST00000379390 POGZQ7Z3K3 1410 aa37.31■■■■□ 3.56
TM6SF1-204ENST00000379390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.3■■■■□ 3.56
TM6SF1-204ENST00000379390 CCDC141Q6ZP82 1450 aa37.28■■■■□ 3.56
TM6SF1-204ENST00000379390 ZNF518AQ6AHZ1 1483 aa37.27■■■■□ 3.56
TM6SF1-204ENST00000379390 RAPGEF3O95398 923 aa37.26■■■■□ 3.56
TM6SF1-204ENST00000379390 DAPK1P53355 1430 aa37.25■■■■□ 3.55
TM6SF1-204ENST00000379390 AFAP1Q8N556 730 aa37.23■■■■□ 3.55
TM6SF1-204ENST00000379390 ABCC5O15440 1437 aa37.23■■■■□ 3.55
TM6SF1-204ENST00000379390 KDM5CP41229 1560 aa37.23■■■■□ 3.55
TM6SF1-204ENST00000379390 ITGAEP38570 1179 aa37.21■■■■□ 3.55
TM6SF1-204ENST00000379390 HECW2Q9P2P5 1572 aa37.16■■■■□ 3.54
TM6SF1-204ENST00000379390 RSPH4AQ5TD94 716 aa37.15■■■■□ 3.54
TM6SF1-204ENST00000379390 INO80Q9ULG1 1556 aaPredicted RBP37.15■■■■□ 3.54
TM6SF1-204ENST00000379390 ZMYM4Q5VZL5 1548 aa37.15■■■■□ 3.54
TM6SF1-204ENST00000379390 PTPRKQ15262 1439 aa37.14■■■■□ 3.54
TM6SF1-204ENST00000379390 ADGBQ8N7X0 1667 aa37.14■■■■□ 3.54
TM6SF1-204ENST00000379390 SHANK2Q9UPX8 1470 aa37.13■■■■□ 3.53
TM6SF1-204ENST00000379390 KIDINS220Q9ULH0 1771 aa37.13■■■■□ 3.53
TM6SF1-204ENST00000379390 MAST1Q9Y2H9 1570 aa37.13■■■■□ 3.53
TM6SF1-204ENST00000379390 C9orf84Q5VXU9 1444 aa37.12■■■■□ 3.53
TM6SF1-204ENST00000379390 ZFYVE16Q7Z3T8 1539 aa37.12■■■■□ 3.53
TM6SF1-204ENST00000379390 ATP7AQ04656 1500 aa37.11■■■■□ 3.53
TM6SF1-204ENST00000379390 TRIM26Q12899 539 aaPredicted RBP37.1■■■■□ 3.53
TM6SF1-204ENST00000379390 SPAG9O60271 1321 aaKnown RBP37.09■■■■□ 3.53
TM6SF1-204ENST00000379390 TSPY4P0CV99 314 aa37.09■■■■□ 3.53
TM6SF1-204ENST00000379390 TSPY10P0CW01 314 aa37.09■■■■□ 3.53
TM6SF1-204ENST00000379390 CHIC2Q9UKJ5 165 aa37.08■■■■□ 3.53
TM6SF1-204ENST00000379390 MLH3Q9UHC1 1453 aa37.05■■■■□ 3.52
TM6SF1-204ENST00000379390 MYT1LQ9UL68 1186 aa37.04■■■■□ 3.52
TM6SF1-204ENST00000379390 ABCA6Q8N139 1617 aa37.04■■■■□ 3.52
TM6SF1-204ENST00000379390 PLXNC1O60486 1568 aa37.01■■■■□ 3.52
TM6SF1-204ENST00000379390 RTEL1-TNFRSF6BF6WH68 1400 aa37■■■■□ 3.51
TM6SF1-204ENST00000379390 YEATS2Q9ULM3 1422 aa37■■■■□ 3.51
TM6SF1-204ENST00000379390 ADGRL2O95490 1459 aa36.99■■■■□ 3.51
TM6SF1-204ENST00000379390 ARHGEF40Q8TER5 1519 aa36.98■■■■□ 3.51
TM6SF1-204ENST00000379390 MAGI2Q86UL8 1455 aa36.98■■■■□ 3.51
TM6SF1-204ENST00000379390 DIP2CQ9Y2E4 1556 aa36.97■■■■□ 3.51
TM6SF1-204ENST00000379390 NCOA1Q15788 1441 aa36.93■■■■□ 3.5
TM6SF1-204ENST00000379390 ANKRD30AQ9BXX3 1397 aa36.93■■■■□ 3.5
TM6SF1-204ENST00000379390 ROCK1Q13464 1354 aa36.91■■■■□ 3.5
TM6SF1-204ENST00000379390 RRP7BPQ9NSQ0 103 aa36.9■■■■□ 3.5
TM6SF1-204ENST00000379390 GCC2Q8IWJ2 1684 aa36.89■■■■□ 3.5
TM6SF1-204ENST00000379390 KIF15Q9NS87 1388 aa36.89■■■■□ 3.5
TM6SF1-204ENST00000379390 DUOX2Q9NRD8 1548 aa36.82■■■■□ 3.48
TM6SF1-204ENST00000379390 ATP10AO60312 1499 aa36.81■■■■□ 3.48
TM6SF1-204ENST00000379390 SIGLEC1Q9BZZ2 1709 aa36.81■■■■□ 3.48
TM6SF1-204ENST00000379390 PCGF6Q9BYE7 350 aa36.81■■■■□ 3.48
TM6SF1-204ENST00000379390 A2MP01023 1474 aa36.8■■■■□ 3.48
TM6SF1-204ENST00000379390 HFM1A2PYH4 1435 aa36.8■■■■□ 3.48
TM6SF1-204ENST00000379390 NAIPQ13075 1403 aa36.79■■■■□ 3.48
TM6SF1-204ENST00000379390 REREQ9P2R6 1566 aa36.76■■■■□ 3.47
TM6SF1-204ENST00000379390 DHX29Q7Z478 1369 aaKnown RBP36.73■■■■□ 3.47
TM6SF1-204ENST00000379390 ANKRD50Q9ULJ7 1429 aa36.72■■■■□ 3.47
TM6SF1-204ENST00000379390 EIF2AK4Q9P2K8 1649 aaKnown RBP36.7■■■■□ 3.47
TM6SF1-204ENST00000379390 ERBINQ96RT1 1412 aa36.7■■■■□ 3.47
TM6SF1-204ENST00000379390 SETD5Q9C0A6 1442 aa36.65■■■■□ 3.46
TM6SF1-204ENST00000379390 BCORL1Q5H9F3 1711 aa36.65■■■■□ 3.46
TM6SF1-204ENST00000379390 AGLP35573 1532 aa36.62■■■■□ 3.45
TM6SF1-204ENST00000379390 RAB3GAP2Q9H2M9 1393 aa36.59■■■■□ 3.45
TM6SF1-204ENST00000379390 RNF17Q9BXT8 1623 aaKnown RBP36.58■■■■□ 3.45
TM6SF1-204ENST00000379390 KIF3BO15066 747 aa36.58■■■■□ 3.45
TM6SF1-204ENST00000379390 DEPDC5O75140 1603 aa36.57■■■■□ 3.45
TM6SF1-204ENST00000379390 ARID4BQ4LE39 1312 aaPredicted RBP36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms