RNA–Protein interactions for RNA: ENST00000379268.6

TNFRSF18-203, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 1,179 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-203ENST00000379268 MAGI2Q86UL8 1455 aa34.16■■■■□ 3.06
TNFRSF18-203ENST00000379268 BCORL1Q5H9F3 1711 aa34.15■■■■□ 3.06
TNFRSF18-203ENST00000379268 FYCO1Q9BQS8 1478 aa34.14■■■■□ 3.06
TNFRSF18-203ENST00000379268 POGZQ7Z3K3 1410 aa34.13■■■■□ 3.05
TNFRSF18-203ENST00000379268 HECW2Q9P2P5 1572 aa34.11■■■■□ 3.05
TNFRSF18-203ENST00000379268 ZFYVE16Q7Z3T8 1539 aa34.11■■■■□ 3.05
TNFRSF18-203ENST00000379268 ARHGAP5Q13017 1502 aa34.09■■■■□ 3.05
TNFRSF18-203ENST00000379268 PTPRMP28827 1452 aa34.07■■■■□ 3.05
TNFRSF18-203ENST00000379268 YEATS2Q9ULM3 1422 aa34.07■■■■□ 3.04
TNFRSF18-203ENST00000379268 CDC42BPBQ9Y5S2 1711 aa34.02■■■■□ 3.04
TNFRSF18-203ENST00000379268 MADDQ8WXG6 1647 aa34.02■■■■□ 3.04
TNFRSF18-203ENST00000379268 ZNF518AQ6AHZ1 1483 aa34■■■■□ 3.03
TNFRSF18-203ENST00000379268 PREX2Q70Z35 1606 aa33.98■■■■□ 3.03
TNFRSF18-203ENST00000379268 ATP10AO60312 1499 aa33.95■■■■□ 3.03
TNFRSF18-203ENST00000379268 SIGLEC1Q9BZZ2 1709 aa33.93■■■■□ 3.02
TNFRSF18-203ENST00000379268 AFAP1Q8N556 730 aa33.93■■■■□ 3.02
TNFRSF18-203ENST00000379268 KDM5CP41229 1560 aa33.93■■■■□ 3.02
TNFRSF18-203ENST00000379268 CDC42BPAQ5VT25 1732 aa33.91■■■■□ 3.02
TNFRSF18-203ENST00000379268 RIMS1Q86UR5 1692 aaKnown RBP33.9■■■■□ 3.02
TNFRSF18-203ENST00000379268 C9orf84Q5VXU9 1444 aa33.9■■■■□ 3.02
TNFRSF18-203ENST00000379268 ABCC1P33527 1531 aa33.86■■■■□ 3.01
TNFRSF18-203ENST00000379268 CEP162Q5TB80 1403 aa33.85■■■■□ 3.01
TNFRSF18-203ENST00000379268 MYT1LQ9UL68 1186 aa33.84■■■■□ 3.01
TNFRSF18-203ENST00000379268 MLECQ14165 292 aa33.83■■■■□ 3.01
TNFRSF18-203ENST00000379268 MLH3Q9UHC1 1453 aa33.82■■■■□ 3.01
TNFRSF18-203ENST00000379268 ITSN2Q9NZM3 1697 aa33.82■■■■□ 3
TNFRSF18-203ENST00000379268 ARHGEF12Q9NZN5 1544 aa33.82■■■■□ 3
TNFRSF18-203ENST00000379268 TRAPPC8Q9Y2L5 1435 aa33.8■■■■□ 3
TNFRSF18-203ENST00000379268 FER1L4A9Z1Z3 1794 aa33.8■■■■□ 3
TNFRSF18-203ENST00000379268 GPATCH8Q9UKJ3 1502 aaKnown RBP33.79■■■■□ 3
TNFRSF18-203ENST00000379268 MTUS2Q5JR59 1369 aa33.78■■■■□ 3
TNFRSF18-203ENST00000379268 DIP2CQ9Y2E4 1556 aa33.77■■■■□ 3
TNFRSF18-203ENST00000379268 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
TNFRSF18-203ENST00000379268 ZNF777Q9ULD5 760 aaPredicted RBP33.75■■■□□ 2.99
TNFRSF18-203ENST00000379268 SAMD9LQ8IVG5 1584 aa33.72■■■□□ 2.99
TNFRSF18-203ENST00000379268 CCNB3Q8WWL7 1395 aa33.72■■■□□ 2.99
TNFRSF18-203ENST00000379268 ABCA6Q8N139 1617 aa33.71■■■□□ 2.99
TNFRSF18-203ENST00000379268 LMTK3Q96Q04 1460 aa33.71■■■□□ 2.99
TNFRSF18-203ENST00000379268 CFDP1Q9UEE9 299 aaPredicted RBP33.71■■■□□ 2.99
TNFRSF18-203ENST00000379268 KIDINS220Q9ULH0 1771 aa33.68■■■□□ 2.98
TNFRSF18-203ENST00000379268 PLPPR3Q6T4P5 718 aa33.68■■■□□ 2.98
TNFRSF18-203ENST00000379268 KIAA1107Q9UPP5 1409 aa33.67■■■□□ 2.98
TNFRSF18-203ENST00000379268 PLEKHH2Q8IVE3 1493 aa33.67■■■□□ 2.98
TNFRSF18-203ENST00000379268 EHBP1L1Q8N3D4 1523 aa33.67■■■□□ 2.98
TNFRSF18-203ENST00000379268 SYCP2Q9BX26 1530 aa33.65■■■□□ 2.98
TNFRSF18-203ENST00000379268 AGLP35573 1532 aa33.64■■■□□ 2.98
TNFRSF18-203ENST00000379268 HNRNPMP52272 730 aaKnown RBP eCLIP33.63■■■□□ 2.97
TNFRSF18-203ENST00000379268 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
TNFRSF18-203ENST00000379268 SPAG9O60271 1321 aaKnown RBP33.6■■■□□ 2.97
TNFRSF18-203ENST00000379268 TIAM1Q13009 1591 aa33.57■■■□□ 2.96
TNFRSF18-203ENST00000379268 ILDR1Q86SU0 546 aaPredicted RBP33.56■■■□□ 2.96
TNFRSF18-203ENST00000379268 SETD1BQ9UPS6 1966 aaKnown RBP33.52■■■□□ 2.96
TNFRSF18-203ENST00000379268 CEBPAP49715 358 aaPredicted RBP33.52■■■□□ 2.96
TNFRSF18-203ENST00000379268 ESF1Q9H501 851 aaKnown RBP33.52■■■□□ 2.96
TNFRSF18-203ENST00000379268 HSPA2P54652 639 aa33.51■■■□□ 2.95
TNFRSF18-203ENST00000379268 ATP7AQ04656 1500 aa33.51■■■□□ 2.95
TNFRSF18-203ENST00000379268 VPS8Q8N3P4 1428 aa33.5■■■□□ 2.95
TNFRSF18-203ENST00000379268 SUPT6HQ7KZ85 1726 aaKnown RBP33.49■■■□□ 2.95
TNFRSF18-203ENST00000379268 PREX1Q8TCU6 1659 aa33.48■■■□□ 2.95
TNFRSF18-203ENST00000379268 INO80Q9ULG1 1556 aaPredicted RBP33.48■■■□□ 2.95
TNFRSF18-203ENST00000379268 ZNF644Q9H582 1327 aaPredicted RBP33.47■■■□□ 2.95
TNFRSF18-203ENST00000379268 NCOA2Q15596 1464 aa33.46■■■□□ 2.95
TNFRSF18-203ENST00000379268 CNTLNQ9NXG0 1405 aa33.44■■■□□ 2.94
TNFRSF18-203ENST00000379268 MBD5Q9P267 1494 aa33.44■■■□□ 2.94
TNFRSF18-203ENST00000379268 C3P01024 1663 aa33.42■■■□□ 2.94
TNFRSF18-203ENST00000379268 A2MP01023 1474 aa33.4■■■□□ 2.94
TNFRSF18-203ENST00000379268 PLXNC1O60486 1568 aa33.38■■■□□ 2.93
TNFRSF18-203ENST00000379268 ADGBQ8N7X0 1667 aa33.37■■■□□ 2.93
TNFRSF18-203ENST00000379268 LRRC9Q6ZRR7 1453 aa33.37■■■□□ 2.93
TNFRSF18-203ENST00000379268 RTEL1-TNFRSF6BF6WH68 1400 aa33.36■■■□□ 2.93
TNFRSF18-203ENST00000379268 UHRF1BP1Q6BDS2 1440 aa33.36■■■□□ 2.93
TNFRSF18-203ENST00000379268 RSPH4AQ5TD94 716 aa33.35■■■□□ 2.93
TNFRSF18-203ENST00000379268 MAP3K1Q13233 1512 aa33.34■■■□□ 2.93
TNFRSF18-203ENST00000379268 MROH2AA6NES4 1674 aa33.33■■■□□ 2.93
TNFRSF18-203ENST00000379268 CAMSAP2Q08AD1 1489 aa33.31■■■□□ 2.92
TNFRSF18-203ENST00000379268 CCDC141Q6ZP82 1450 aa33.3■■■□□ 2.92
TNFRSF18-203ENST00000379268 PPP6R1Q9UPN7 881 aa33.28■■■□□ 2.92
TNFRSF18-203ENST00000379268 ZMYM3Q14202 1370 aa33.27■■■□□ 2.92
TNFRSF18-203ENST00000379268 GGT6Q6P531 493 aa33.25■■■□□ 2.91
TNFRSF18-203ENST00000379268 NPATQ14207 1427 aa33.25■■■□□ 2.91
TNFRSF18-203ENST00000379268 FBXO41Q8TF61 875 aa33.24■■■□□ 2.91
TNFRSF18-203ENST00000379268 DHX29Q7Z478 1369 aaKnown RBP33.23■■■□□ 2.91
TNFRSF18-203ENST00000379268 KANK4Q5T7N3 995 aaPredicted RBP33.23■■■□□ 2.91
TNFRSF18-203ENST00000379268 ARHGEF5Q12774 1597 aa33.22■■■□□ 2.91
TNFRSF18-203ENST00000379268 DMRT2Q9Y5R5 561 aa33.22■■■□□ 2.91
TNFRSF18-203ENST00000379268 CLTCQ00610 1675 aaKnown RBP33.22■■■□□ 2.91
TNFRSF18-203ENST00000379268 STRCQ7RTU9 1775 aa33.19■■■□□ 2.9
TNFRSF18-203ENST00000379268 TSPY4P0CV99 314 aa33.19■■■□□ 2.9
TNFRSF18-203ENST00000379268 TSPY10P0CW01 314 aa33.19■■■□□ 2.9
TNFRSF18-203ENST00000379268 APLP2Q06481 763 aa33.15■■■□□ 2.9
TNFRSF18-203ENST00000379268 MIA2Q96PC5 1412 aa33.14■■■□□ 2.9
TNFRSF18-203ENST00000379268 MYOM3Q5VTT5 1437 aa33.12■■■□□ 2.89
TNFRSF18-203ENST00000379268 KIF3BO15066 747 aa33.11■■■□□ 2.89
TNFRSF18-203ENST00000379268 PTPRKQ15262 1439 aa33.09■■■□□ 2.89
TNFRSF18-203ENST00000379268 MAST1Q9Y2H9 1570 aa33.05■■■□□ 2.88
TNFRSF18-203ENST00000379268 CERKQ8TCT0 537 aa33.05■■■□□ 2.88
TNFRSF18-203ENST00000379268 FAM135AQ9P2D6 1515 aa33.05■■■□□ 2.88
TNFRSF18-203ENST00000379268 PTPRTO14522 1441 aa33.04■■■□□ 2.88
TNFRSF18-203ENST00000379268 NCOA1Q15788 1441 aa33.02■■■□□ 2.88
TNFRSF18-203ENST00000379268 MYO3AQ8NEV4 1616 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms