RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 KDM4FA0A1W2PPD8 638 aa31.3■■■□□ 2.6
C5orf56-203ENST00000378953 RICTORQ6R327 1708 aa31.25■■■□□ 2.59
C5orf56-203ENST00000378953 PREX2Q70Z35 1606 aa31.24■■■□□ 2.59
C5orf56-203ENST00000378953 EHBP1L1Q8N3D4 1523 aa31.24■■■□□ 2.59
C5orf56-203ENST00000378953 POGZQ7Z3K3 1410 aa31.24■■■□□ 2.59
C5orf56-203ENST00000378953 CDC42BPBQ9Y5S2 1711 aa31.23■■■□□ 2.59
C5orf56-203ENST00000378953 GPATCH8Q9UKJ3 1502 aaKnown RBP31.23■■■□□ 2.59
C5orf56-203ENST00000378953 CCNB3Q8WWL7 1395 aa31.2■■■□□ 2.59
C5orf56-203ENST00000378953 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
C5orf56-203ENST00000378953 TIAM1Q13009 1591 aa31.19■■■□□ 2.58
C5orf56-203ENST00000378953 CDC42BPAQ5VT25 1732 aa31.18■■■□□ 2.58
C5orf56-203ENST00000378953 MAGI2Q86UL8 1455 aa31.16■■■□□ 2.58
C5orf56-203ENST00000378953 CFDP1Q9UEE9 299 aaPredicted RBP31.15■■■□□ 2.58
C5orf56-203ENST00000378953 AFAP1Q8N556 730 aa31.14■■■□□ 2.58
C5orf56-203ENST00000378953 ZNF777Q9ULD5 760 aaPredicted RBP31.14■■■□□ 2.58
C5orf56-203ENST00000378953 ZNF518AQ6AHZ1 1483 aa31.14■■■□□ 2.57
C5orf56-203ENST00000378953 MAP3K1Q13233 1512 aa31.13■■■□□ 2.57
C5orf56-203ENST00000378953 ARHGEF40Q8TER5 1519 aa31.12■■■□□ 2.57
C5orf56-203ENST00000378953 ABCC1P33527 1531 aa31.11■■■□□ 2.57
C5orf56-203ENST00000378953 YEATS2Q9ULM3 1422 aa31.11■■■□□ 2.57
C5orf56-203ENST00000378953 ZFYVE16Q7Z3T8 1539 aa31.1■■■□□ 2.57
C5orf56-203ENST00000378953 ARHGEF12Q9NZN5 1544 aa31.1■■■□□ 2.57
C5orf56-203ENST00000378953 LRRC9Q6ZRR7 1453 aa31.1■■■□□ 2.57
C5orf56-203ENST00000378953 NCOA2Q15596 1464 aa31.08■■■□□ 2.57
C5orf56-203ENST00000378953 TRAPPC8Q9Y2L5 1435 aa31.07■■■□□ 2.57
C5orf56-203ENST00000378953 KDM5CP41229 1560 aa31.06■■■□□ 2.56
C5orf56-203ENST00000378953 KANK4Q5T7N3 995 aaPredicted RBP31.06■■■□□ 2.56
C5orf56-203ENST00000378953 SAMD9LQ8IVG5 1584 aa31.05■■■□□ 2.56
C5orf56-203ENST00000378953 ARID4BQ4LE39 1312 aaPredicted RBP31.04■■■□□ 2.56
C5orf56-203ENST00000378953 APLP2Q06481 763 aa31.04■■■□□ 2.56
C5orf56-203ENST00000378953 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
C5orf56-203ENST00000378953 KIAA1107Q9UPP5 1409 aa31.03■■■□□ 2.56
C5orf56-203ENST00000378953 PLEKHH2Q8IVE3 1493 aa31.01■■■□□ 2.56
C5orf56-203ENST00000378953 ITSN2Q9NZM3 1697 aa31.01■■■□□ 2.55
C5orf56-203ENST00000378953 HNRNPMP52272 730 aaKnown RBP eCLIP31.01■■■□□ 2.55
C5orf56-203ENST00000378953 MYT1LQ9UL68 1186 aa31■■■□□ 2.55
C5orf56-203ENST00000378953 ATP10AO60312 1499 aa30.99■■■□□ 2.55
C5orf56-203ENST00000378953 MLH3Q9UHC1 1453 aa30.99■■■□□ 2.55
C5orf56-203ENST00000378953 SYCP2Q9BX26 1530 aa30.98■■■□□ 2.55
C5orf56-203ENST00000378953 ZNF644Q9H582 1327 aaPredicted RBP30.98■■■□□ 2.55
C5orf56-203ENST00000378953 HECW2Q9P2P5 1572 aa30.96■■■□□ 2.55
C5orf56-203ENST00000378953 C9orf84Q5VXU9 1444 aa30.94■■■□□ 2.54
C5orf56-203ENST00000378953 SPAG9O60271 1321 aaKnown RBP30.9■■■□□ 2.54
C5orf56-203ENST00000378953 BCORL1Q5H9F3 1711 aa30.89■■■□□ 2.54
C5orf56-203ENST00000378953 ADAMTSL3P82987 1691 aa30.88■■■□□ 2.53
C5orf56-203ENST00000378953 MBD5Q9P267 1494 aa30.88■■■□□ 2.53
C5orf56-203ENST00000378953 DIP2CQ9Y2E4 1556 aa30.88■■■□□ 2.53
C5orf56-203ENST00000378953 SIGLEC1Q9BZZ2 1709 aa30.86■■■□□ 2.53
C5orf56-203ENST00000378953 ABCA6Q8N139 1617 aa30.84■■■□□ 2.53
C5orf56-203ENST00000378953 CAMSAP2Q08AD1 1489 aa30.83■■■□□ 2.53
C5orf56-203ENST00000378953 KIDINS220Q9ULH0 1771 aa30.83■■■□□ 2.53
C5orf56-203ENST00000378953 MLECQ14165 292 aa30.82■■■□□ 2.52
C5orf56-203ENST00000378953 MYOM3Q5VTT5 1437 aa30.81■■■□□ 2.52
C5orf56-203ENST00000378953 REREQ9P2R6 1566 aa30.81■■■□□ 2.52
C5orf56-203ENST00000378953 RSPH4AQ5TD94 716 aa30.8■■■□□ 2.52
C5orf56-203ENST00000378953 MIA2Q96PC5 1412 aa30.79■■■□□ 2.52
C5orf56-203ENST00000378953 PTPRMP28827 1452 aa30.78■■■□□ 2.52
C5orf56-203ENST00000378953 MADDQ8WXG6 1647 aa30.78■■■□□ 2.52
C5orf56-203ENST00000378953 ATP7AQ04656 1500 aa30.78■■■□□ 2.52
C5orf56-203ENST00000378953 INO80Q9ULG1 1556 aaPredicted RBP30.75■■■□□ 2.51
C5orf56-203ENST00000378953 CCDC141Q6ZP82 1450 aa30.75■■■□□ 2.51
C5orf56-203ENST00000378953 RTEL1-TNFRSF6BF6WH68 1400 aa30.73■■■□□ 2.51
C5orf56-203ENST00000378953 AGLP35573 1532 aa30.73■■■□□ 2.51
C5orf56-203ENST00000378953 ARHGEF5Q12774 1597 aa30.7■■■□□ 2.5
C5orf56-203ENST00000378953 TSPY4P0CV99 314 aa30.67■■■□□ 2.5
C5orf56-203ENST00000378953 TSPY10P0CW01 314 aa30.67■■■□□ 2.5
C5orf56-203ENST00000378953 RIMS1Q86UR5 1692 aaKnown RBP30.66■■■□□ 2.5
C5orf56-203ENST00000378953 A2MP01023 1474 aa30.66■■■□□ 2.5
C5orf56-203ENST00000378953 FGD6Q6ZV73 1430 aa30.63■■■□□ 2.49
C5orf56-203ENST00000378953 PLXNC1O60486 1568 aa30.61■■■□□ 2.49
C5orf56-203ENST00000378953 FER1L4A9Z1Z3 1794 aa30.6■■■□□ 2.49
C5orf56-203ENST00000378953 DHX29Q7Z478 1369 aaKnown RBP30.58■■■□□ 2.49
C5orf56-203ENST00000378953 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
C5orf56-203ENST00000378953 PLPPR3Q6T4P5 718 aa30.57■■■□□ 2.48
C5orf56-203ENST00000378953 ADGBQ8N7X0 1667 aa30.57■■■□□ 2.48
C5orf56-203ENST00000378953 ESF1Q9H501 851 aaKnown RBP30.56■■■□□ 2.48
C5orf56-203ENST00000378953 TCOF1Q13428 1488 aaKnown RBP30.56■■■□□ 2.48
C5orf56-203ENST00000378953 MAST1Q9Y2H9 1570 aa30.52■■■□□ 2.48
C5orf56-203ENST00000378953 ABCC5O15440 1437 aa30.51■■■□□ 2.47
C5orf56-203ENST00000378953 CEBPAP49715 358 aaPredicted RBP30.51■■■□□ 2.47
C5orf56-203ENST00000378953 GGT6Q6P531 493 aa30.5■■■□□ 2.47
C5orf56-203ENST00000378953 CNTLNQ9NXG0 1405 aa30.49■■■□□ 2.47
C5orf56-203ENST00000378953 PPARGC1BQ86YN6 1023 aaKnown RBP30.46■■■□□ 2.47
C5orf56-203ENST00000378953 PPP6R1Q9UPN7 881 aa30.46■■■□□ 2.47
C5orf56-203ENST00000378953 DAPK1P53355 1430 aa30.46■■■□□ 2.47
C5orf56-203ENST00000378953 SHANK2Q9UPX8 1470 aa30.45■■■□□ 2.47
C5orf56-203ENST00000378953 KIF3BO15066 747 aa30.45■■■□□ 2.47
C5orf56-203ENST00000378953 FAM50AQ14320 339 aaKnown RBP30.43■■■□□ 2.46
C5orf56-203ENST00000378953 DNMT1P26358 1616 aaKnown RBP30.41■■■□□ 2.46
C5orf56-203ENST00000378953 LMTK3Q96Q04 1460 aa30.38■■■□□ 2.45
C5orf56-203ENST00000378953 ZMYM3Q14202 1370 aa30.38■■■□□ 2.45
C5orf56-203ENST00000378953 CROCC2H7BZ55 1655 aa30.37■■■□□ 2.45
C5orf56-203ENST00000378953 RRP7BPQ9NSQ0 103 aa30.35■■■□□ 2.45
C5orf56-203ENST00000378953 CHIC2Q9UKJ5 165 aa30.35■■■□□ 2.45
C5orf56-203ENST00000378953 KIF15Q9NS87 1388 aa30.35■■■□□ 2.45
C5orf56-203ENST00000378953 C3P01024 1663 aa30.35■■■□□ 2.45
C5orf56-203ENST00000378953 DUOX2Q9NRD8 1548 aa30.33■■■□□ 2.45
C5orf56-203ENST00000378953 MROH2AA6NES4 1674 aa30.33■■■□□ 2.45
C5orf56-203ENST00000378953 ANKRD30AQ9BXX3 1397 aa30.31■■■□□ 2.44
C5orf56-203ENST00000378953 CLTCQ00610 1675 aaKnown RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms