RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 LOC105371045A0A1W2PR82 267 aa27.41■■□□□ 1.98
RER1-202ENST00000378512 MYO5CQ9NQX4 1742 aa27.41■■□□□ 1.98
RER1-202ENST00000378512 YEATS2Q9ULM3 1422 aa27.41■■□□□ 1.98
RER1-202ENST00000378512 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
RER1-202ENST00000378512 PTPRMP28827 1452 aa27.4■■□□□ 1.98
RER1-202ENST00000378512 ZMYM4Q5VZL5 1548 aa27.4■■□□□ 1.98
RER1-202ENST00000378512 MADDQ8WXG6 1647 aa27.39■■□□□ 1.98
RER1-202ENST00000378512 SCAPERQ9BY12 1400 aa27.39■■□□□ 1.97
RER1-202ENST00000378512 POGZQ7Z3K3 1410 aa27.36■■□□□ 1.97
RER1-202ENST00000378512 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
RER1-202ENST00000378512 EFCAB2Q5VUJ9 269 aa27.31■■□□□ 1.96
RER1-202ENST00000378512 CDC42BPBQ9Y5S2 1711 aa27.31■■□□□ 1.96
RER1-202ENST00000378512 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
RER1-202ENST00000378512 RIMS1Q86UR5 1692 aaKnown RBP27.29■■□□□ 1.96
RER1-202ENST00000378512 MAGI2Q86UL8 1455 aa27.28■■□□□ 1.96
RER1-202ENST00000378512 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
RER1-202ENST00000378512 CDC42BPAQ5VT25 1732 aa27.25■■□□□ 1.95
RER1-202ENST00000378512 MLECQ14165 292 aa27.22■■□□□ 1.95
RER1-202ENST00000378512 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
RER1-202ENST00000378512 VPS8Q8N3P4 1428 aa27.21■■□□□ 1.95
RER1-202ENST00000378512 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
RER1-202ENST00000378512 ILDR1Q86SU0 546 aaPredicted RBP27.18■■□□□ 1.94
RER1-202ENST00000378512 ATP10AO60312 1499 aa27.18■■□□□ 1.94
RER1-202ENST00000378512 ZNF518AQ6AHZ1 1483 aa27.18■■□□□ 1.94
RER1-202ENST00000378512 KDM5CP41229 1560 aa27.18■■□□□ 1.94
RER1-202ENST00000378512 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
RER1-202ENST00000378512 ARHGEF12Q9NZN5 1544 aa27.17■■□□□ 1.94
RER1-202ENST00000378512 LMTK3Q96Q04 1460 aa27.15■■□□□ 1.94
RER1-202ENST00000378512 C9orf84Q5VXU9 1444 aa27.15■■□□□ 1.94
RER1-202ENST00000378512 TIAM1Q13009 1591 aa27.14■■□□□ 1.94
RER1-202ENST00000378512 TRAPPC8Q9Y2L5 1435 aa27.14■■□□□ 1.94
RER1-202ENST00000378512 ABCC1P33527 1531 aa27.13■■□□□ 1.93
RER1-202ENST00000378512 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
RER1-202ENST00000378512 MTUS2Q5JR59 1369 aa27.13■■□□□ 1.93
RER1-202ENST00000378512 FER1L4A9Z1Z3 1794 aa27.12■■□□□ 1.93
RER1-202ENST00000378512 DIP2CQ9Y2E4 1556 aa27.11■■□□□ 1.93
RER1-202ENST00000378512 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
RER1-202ENST00000378512 MAP3K1Q13233 1512 aa27.09■■□□□ 1.93
RER1-202ENST00000378512 ABCA6Q8N139 1617 aa27.09■■□□□ 1.93
RER1-202ENST00000378512 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
RER1-202ENST00000378512 SAMD9LQ8IVG5 1584 aa27.07■■□□□ 1.92
RER1-202ENST00000378512 HSPA2P54652 639 aa27.04■■□□□ 1.92
RER1-202ENST00000378512 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
RER1-202ENST00000378512 SUPT6HQ7KZ85 1726 aaKnown RBP27.04■■□□□ 1.92
RER1-202ENST00000378512 ZNF777Q9ULD5 760 aaPredicted RBP27.03■■□□□ 1.92
RER1-202ENST00000378512 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
RER1-202ENST00000378512 CEBPAP49715 358 aaPredicted RBP27■■□□□ 1.91
RER1-202ENST00000378512 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
RER1-202ENST00000378512 KIDINS220Q9ULH0 1771 aa27■■□□□ 1.91
RER1-202ENST00000378512 SYCP2Q9BX26 1530 aa26.99■■□□□ 1.91
RER1-202ENST00000378512 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
RER1-202ENST00000378512 NCOA2Q15596 1464 aa26.98■■□□□ 1.91
RER1-202ENST00000378512 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
RER1-202ENST00000378512 HNRNPMP52272 730 aaKnown RBP eCLIP26.96■■□□□ 1.913e-7■■■□□ 17.8
RER1-202ENST00000378512 PLEKHH2Q8IVE3 1493 aa26.95■■□□□ 1.9
RER1-202ENST00000378512 CFDP1Q9UEE9 299 aaPredicted RBP26.93■■□□□ 1.9
RER1-202ENST00000378512 AGLP35573 1532 aa26.9■■□□□ 1.9
RER1-202ENST00000378512 KANK4Q5T7N3 995 aaPredicted RBP26.88■■□□□ 1.89
RER1-202ENST00000378512 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
RER1-202ENST00000378512 SPAG9O60271 1321 aaKnown RBP26.86■■□□□ 1.89
RER1-202ENST00000378512 PREX1Q8TCU6 1659 aa26.86■■□□□ 1.89
RER1-202ENST00000378512 MBD5Q9P267 1494 aa26.86■■□□□ 1.89
RER1-202ENST00000378512 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
RER1-202ENST00000378512 C3P01024 1663 aa26.84■■□□□ 1.89
RER1-202ENST00000378512 ATP7AQ04656 1500 aa26.83■■□□□ 1.89
RER1-202ENST00000378512 CAMSAP2Q08AD1 1489 aa26.79■■□□□ 1.88
RER1-202ENST00000378512 PLXNC1O60486 1568 aa26.76■■□□□ 1.87
RER1-202ENST00000378512 ARHGEF5Q12774 1597 aa26.76■■□□□ 1.87
RER1-202ENST00000378512 MYOM3Q5VTT5 1437 aa26.75■■□□□ 1.87
RER1-202ENST00000378512 ESF1Q9H501 851 aaKnown RBP26.74■■□□□ 1.87
RER1-202ENST00000378512 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
RER1-202ENST00000378512 MIA2Q96PC5 1412 aa26.74■■□□□ 1.87
RER1-202ENST00000378512 A2MP01023 1474 aa26.74■■□□□ 1.87
RER1-202ENST00000378512 FBXO41Q8TF61 875 aa26.73■■□□□ 1.87
RER1-202ENST00000378512 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
RER1-202ENST00000378512 CCDC141Q6ZP82 1450 aa26.71■■□□□ 1.87
RER1-202ENST00000378512 ADGBQ8N7X0 1667 aa26.71■■□□□ 1.87
RER1-202ENST00000378512 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
RER1-202ENST00000378512 APLP2Q06481 763 aa26.71■■□□□ 1.87
RER1-202ENST00000378512 CNTLNQ9NXG0 1405 aa26.7■■□□□ 1.86
RER1-202ENST00000378512 RSPH4AQ5TD94 716 aa26.69■■□□□ 1.86
RER1-202ENST00000378512 SETD1BQ9UPS6 1966 aaKnown RBP26.67■■□□□ 1.86
RER1-202ENST00000378512 CLTCQ00610 1675 aaKnown RBP26.67■■□□□ 1.86
RER1-202ENST00000378512 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
RER1-202ENST00000378512 ZMYM3Q14202 1370 aa26.65■■□□□ 1.86
RER1-202ENST00000378512 GGT6Q6P531 493 aa26.65■■□□□ 1.86
RER1-202ENST00000378512 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
RER1-202ENST00000378512 PTPN23Q9H3S7 1636 aa26.6■■□□□ 1.85
RER1-202ENST00000378512 NPATQ14207 1427 aa26.58■■□□□ 1.85
RER1-202ENST00000378512 TCOF1Q13428 1488 aaKnown RBP26.57■■□□□ 1.84
RER1-202ENST00000378512 CERKQ8TCT0 537 aa26.57■■□□□ 1.84
RER1-202ENST00000378512 FGD6Q6ZV73 1430 aa26.57■■□□□ 1.84
RER1-202ENST00000378512 DHX29Q7Z478 1369 aaKnown RBP26.56■■□□□ 1.84
RER1-202ENST00000378512 CROCC2H7BZ55 1655 aa26.55■■□□□ 1.84
RER1-202ENST00000378512 PTPRKQ15262 1439 aa26.55■■□□□ 1.84
RER1-202ENST00000378512 MYO3AQ8NEV4 1616 aa26.52■■□□□ 1.84
RER1-202ENST00000378512 NCOA1Q15788 1441 aa26.51■■□□□ 1.84
RER1-202ENST00000378512 TSPY4P0CV99 314 aa26.51■■□□□ 1.83
RER1-202ENST00000378512 TSPY10P0CW01 314 aa26.51■■□□□ 1.83
RER1-202ENST00000378512 DNMT1P26358 1616 aaKnown RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms