RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
TRIM13-202ENST00000378182 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
TRIM13-202ENST00000378182 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
TRIM13-202ENST00000378182 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
TRIM13-202ENST00000378182 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
TRIM13-202ENST00000378182 KIAA2012Q0VF49 1180 aa18.02■□□□□ 0.47
TRIM13-202ENST00000378182 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
TRIM13-202ENST00000378182 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
TRIM13-202ENST00000378182 CREBRFQ8IUR6 639 aa18.01■□□□□ 0.47
TRIM13-202ENST00000378182 MCCP23508 829 aa17.99■□□□□ 0.47
TRIM13-202ENST00000378182 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
TRIM13-202ENST00000378182 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
TRIM13-202ENST00000378182 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
TRIM13-202ENST00000378182 LTV1Q96GA3 475 aaPredicted RBP17.98■□□□□ 0.47
TRIM13-202ENST00000378182 NRDCO43847 1150 aa17.98■□□□□ 0.47
TRIM13-202ENST00000378182 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
TRIM13-202ENST00000378182 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
TRIM13-202ENST00000378182 TMF1P82094 1093 aa17.96■□□□□ 0.47
TRIM13-202ENST00000378182 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-202ENST00000378182 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
TRIM13-202ENST00000378182 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
TRIM13-202ENST00000378182 CHMP4BQ9H444 224 aaKnown RBP17.95■□□□□ 0.46
TRIM13-202ENST00000378182 HSCBQ8IWL3 235 aa17.95■□□□□ 0.46
TRIM13-202ENST00000378182 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
TRIM13-202ENST00000378182 RAD21O60216 631 aa17.92■□□□□ 0.46
TRIM13-202ENST00000378182 RASSF8Q8NHQ8 419 aa17.9■□□□□ 0.46
TRIM13-202ENST00000378182 CCNB3Q8WWL7 1395 aa17.9■□□□□ 0.46
TRIM13-202ENST00000378182 MS4A1P11836 297 aa17.9■□□□□ 0.46
TRIM13-202ENST00000378182 EVA1CP58658 441 aa17.9■□□□□ 0.46
TRIM13-202ENST00000378182 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
TRIM13-202ENST00000378182 ARID3AQ99856 593 aa17.89■□□□□ 0.45
TRIM13-202ENST00000378182 CHAF1AQ13111 956 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-202ENST00000378182 FBXW7Q969H0 707 aa17.88■□□□□ 0.45
TRIM13-202ENST00000378182 FOXD1Q16676 465 aa17.86■□□□□ 0.45
TRIM13-202ENST00000378182 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
TRIM13-202ENST00000378182 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
TRIM13-202ENST00000378182 MARCH6O60337 910 aa17.86■□□□□ 0.45
TRIM13-202ENST00000378182 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
TRIM13-202ENST00000378182 NGDNQ8NEJ9 315 aaKnown RBP17.86■□□□□ 0.45
TRIM13-202ENST00000378182 BAZ1BQ9UIG0 1483 aaKnown RBP17.85■□□□□ 0.45
TRIM13-202ENST00000378182 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
TRIM13-202ENST00000378182 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
TRIM13-202ENST00000378182 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
TRIM13-202ENST00000378182 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
TRIM13-202ENST00000378182 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
TRIM13-202ENST00000378182 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRIM13-202ENST00000378182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM13-202ENST00000378182 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
TRIM13-202ENST00000378182 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
TRIM13-202ENST00000378182 L1TD1Q5T7N2 865 aaKnown RBP17.81■□□□□ 0.44
TRIM13-202ENST00000378182 MSNP26038 577 aaKnown RBP17.8■□□□□ 0.44
TRIM13-202ENST00000378182 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
TRIM13-202ENST00000378182 SYTL4Q96C24 671 aaPredicted RBP17.8■□□□□ 0.44
TRIM13-202ENST00000378182 AMPHP49418 695 aa17.8■□□□□ 0.44
TRIM13-202ENST00000378182 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
TRIM13-202ENST00000378182 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
TRIM13-202ENST00000378182 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
TRIM13-202ENST00000378182 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
TRIM13-202ENST00000378182 TRIM34Q9BYJ4 488 aa17.77■□□□□ 0.44
TRIM13-202ENST00000378182 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.43
TRIM13-202ENST00000378182 GZF1Q9H116 711 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-202ENST00000378182 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
TRIM13-202ENST00000378182 STK31Q9BXU1 1019 aa17.76■□□□□ 0.43
TRIM13-202ENST00000378182 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
TRIM13-202ENST00000378182 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
TRIM13-202ENST00000378182 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
TRIM13-202ENST00000378182 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
TRIM13-202ENST00000378182 CEP89Q96ST8 783 aa17.72■□□□□ 0.43
TRIM13-202ENST00000378182 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
TRIM13-202ENST00000378182 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
TRIM13-202ENST00000378182 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
TRIM13-202ENST00000378182 ROCK2O75116 1388 aaKnown RBP17.71■□□□□ 0.43
TRIM13-202ENST00000378182 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
TRIM13-202ENST00000378182 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.43
TRIM13-202ENST00000378182 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
TRIM13-202ENST00000378182 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
TRIM13-202ENST00000378182 TPM4P67936 248 aa17.68■□□□□ 0.42
TRIM13-202ENST00000378182 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
TRIM13-202ENST00000378182 PKD2Q13563 968 aa17.67■□□□□ 0.42
TRIM13-202ENST00000378182 KIF3BO15066 747 aa17.66■□□□□ 0.42
TRIM13-202ENST00000378182 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
TRIM13-202ENST00000378182 MFAP1P55081 439 aaKnown RBP17.66■□□□□ 0.42
TRIM13-202ENST00000378182 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
TRIM13-202ENST00000378182 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
TRIM13-202ENST00000378182 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
TRIM13-202ENST00000378182 WASHC2CQ9Y4E1 1318 aa17.64■□□□□ 0.41
TRIM13-202ENST00000378182 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
TRIM13-202ENST00000378182 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
TRIM13-202ENST00000378182 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
TRIM13-202ENST00000378182 TPD52L1Q16890 204 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-202ENST00000378182 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-202ENST00000378182 HTATSF1O43719 755 aaKnown RBP17.62■□□□□ 0.41
TRIM13-202ENST00000378182 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
TRIM13-202ENST00000378182 HNRNPMP52272 730 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM13-202ENST00000378182 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
TRIM13-202ENST00000378182 VPS37DQ86XT2 251 aa17.61■□□□□ 0.41
TRIM13-202ENST00000378182 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
TRIM13-202ENST00000378182 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
TRIM13-202ENST00000378182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
TRIM13-202ENST00000378182 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms