RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CDC42BPBQ9Y5S2 1711 aa20.75■□□□□ 0.91
CKAP2-202ENST00000378034 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
CKAP2-202ENST00000378034 COL17A1Q9UMD9 1497 aaPredicted RBP20.74■□□□□ 0.91
CKAP2-202ENST00000378034 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
CKAP2-202ENST00000378034 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
CKAP2-202ENST00000378034 KANK4Q5T7N3 995 aaPredicted RBP20.72■□□□□ 0.91
CKAP2-202ENST00000378034 NCOA2Q15596 1464 aa20.72■□□□□ 0.91
CKAP2-202ENST00000378034 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
CKAP2-202ENST00000378034 ADGRL1O94910 1474 aa20.68■□□□□ 0.9
CKAP2-202ENST00000378034 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
CKAP2-202ENST00000378034 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
CKAP2-202ENST00000378034 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.9
CKAP2-202ENST00000378034 RICTORQ6R327 1708 aa20.63■□□□□ 0.89
CKAP2-202ENST00000378034 PLEKHH2Q8IVE3 1493 aa20.62■□□□□ 0.89
CKAP2-202ENST00000378034 ABCC1P33527 1531 aa20.62■□□□□ 0.89
CKAP2-202ENST00000378034 RAPGEF3O95398 923 aa20.61■□□□□ 0.89
CKAP2-202ENST00000378034 FRMPD1Q5SYB0 1578 aa20.61■□□□□ 0.89
CKAP2-202ENST00000378034 SAMD9LQ8IVG5 1584 aa20.61■□□□□ 0.89
CKAP2-202ENST00000378034 POGZQ7Z3K3 1410 aa20.6■□□□□ 0.89
CKAP2-202ENST00000378034 ZNF777Q9ULD5 760 aaPredicted RBP20.59■□□□□ 0.89
CKAP2-202ENST00000378034 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
CKAP2-202ENST00000378034 MYOM3Q5VTT5 1437 aa20.58■□□□□ 0.89
CKAP2-202ENST00000378034 ZNF518AQ6AHZ1 1483 aa20.58■□□□□ 0.89
CKAP2-202ENST00000378034 ZMYM4Q5VZL5 1548 aa20.57■□□□□ 0.88
CKAP2-202ENST00000378034 MIA2Q96PC5 1412 aa20.57■□□□□ 0.88
CKAP2-202ENST00000378034 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
CKAP2-202ENST00000378034 MAGI2Q86UL8 1455 aa20.55■□□□□ 0.88
CKAP2-202ENST00000378034 KDM5CP41229 1560 aa20.54■□□□□ 0.88
CKAP2-202ENST00000378034 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
CKAP2-202ENST00000378034 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
CKAP2-202ENST00000378034 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.87
CKAP2-202ENST00000378034 AFAP1Q8N556 730 aa20.51■□□□□ 0.87
CKAP2-202ENST00000378034 ZNF644Q9H582 1327 aaPredicted RBP20.51■□□□□ 0.87
CKAP2-202ENST00000378034 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.87
CKAP2-202ENST00000378034 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
CKAP2-202ENST00000378034 MBD5Q9P267 1494 aa20.49■□□□□ 0.87
CKAP2-202ENST00000378034 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
CKAP2-202ENST00000378034 ARHGEF40Q8TER5 1519 aa20.48■□□□□ 0.87
CKAP2-202ENST00000378034 MLH3Q9UHC1 1453 aa20.48■□□□□ 0.87
CKAP2-202ENST00000378034 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
CKAP2-202ENST00000378034 HECW2Q9P2P5 1572 aa20.48■□□□□ 0.87
CKAP2-202ENST00000378034 ARHGEF5Q12774 1597 aa20.46■□□□□ 0.87
CKAP2-202ENST00000378034 PTPN23Q9H3S7 1636 aa20.46■□□□□ 0.87
CKAP2-202ENST00000378034 TCOF1Q13428 1488 aaKnown RBP20.44■□□□□ 0.86
CKAP2-202ENST00000378034 CCDC141Q6ZP82 1450 aa20.44■□□□□ 0.86
CKAP2-202ENST00000378034 SPAG9O60271 1321 aaKnown RBP20.43■□□□□ 0.86
CKAP2-202ENST00000378034 YEATS2Q9ULM3 1422 aa20.43■□□□□ 0.86
CKAP2-202ENST00000378034 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
CKAP2-202ENST00000378034 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
CKAP2-202ENST00000378034 KIDINS220Q9ULH0 1771 aa20.41■□□□□ 0.86
CKAP2-202ENST00000378034 ATP10AO60312 1499 aa20.41■□□□□ 0.86
CKAP2-202ENST00000378034 INO80Q9ULG1 1556 aaPredicted RBP20.4■□□□□ 0.86
CKAP2-202ENST00000378034 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
CKAP2-202ENST00000378034 ATP7AQ04656 1500 aa20.39■□□□□ 0.85
CKAP2-202ENST00000378034 DIP2CQ9Y2E4 1556 aa20.38■□□□□ 0.85
CKAP2-202ENST00000378034 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
CKAP2-202ENST00000378034 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
CKAP2-202ENST00000378034 C9orf84Q5VXU9 1444 aa20.37■□□□□ 0.85
CKAP2-202ENST00000378034 ABCA6Q8N139 1617 aa20.37■□□□□ 0.85
CKAP2-202ENST00000378034 REREQ9P2R6 1566 aa20.37■□□□□ 0.85
CKAP2-202ENST00000378034 MAST1Q9Y2H9 1570 aa20.35■□□□□ 0.85
CKAP2-202ENST00000378034 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
CKAP2-202ENST00000378034 SHANK2Q9UPX8 1470 aa20.32■□□□□ 0.84
CKAP2-202ENST00000378034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
CKAP2-202ENST00000378034 CROCC2H7BZ55 1655 aa20.32■□□□□ 0.84
CKAP2-202ENST00000378034 ADGBQ8N7X0 1667 aa20.32■□□□□ 0.84
CKAP2-202ENST00000378034 ABCC5O15440 1437 aa20.31■□□□□ 0.84
CKAP2-202ENST00000378034 DAPK1P53355 1430 aa20.31■□□□□ 0.84
CKAP2-202ENST00000378034 FAM50AQ14320 339 aaKnown RBP20.31■□□□□ 0.84
CKAP2-202ENST00000378034 ARID4BQ4LE39 1312 aaPredicted RBP20.3■□□□□ 0.84
CKAP2-202ENST00000378034 AGLP35573 1532 aa20.29■□□□□ 0.84
CKAP2-202ENST00000378034 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
CKAP2-202ENST00000378034 SIGLEC1Q9BZZ2 1709 aa20.28■□□□□ 0.84
CKAP2-202ENST00000378034 A2MP01023 1474 aa20.28■□□□□ 0.84
CKAP2-202ENST00000378034 BCORL1Q5H9F3 1711 aa20.27■□□□□ 0.84
CKAP2-202ENST00000378034 PLXNC1O60486 1568 aa20.27■□□□□ 0.83
CKAP2-202ENST00000378034 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
CKAP2-202ENST00000378034 DHX29Q7Z478 1369 aaKnown RBP20.24■□□□□ 0.83
CKAP2-202ENST00000378034 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
CKAP2-202ENST00000378034 ANKRD30AQ9BXX3 1397 aa20.2■□□□□ 0.82
CKAP2-202ENST00000378034 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
CKAP2-202ENST00000378034 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
CKAP2-202ENST00000378034 NCOA1Q15788 1441 aa20.18■□□□□ 0.82
CKAP2-202ENST00000378034 KIF15Q9NS87 1388 aa20.17■□□□□ 0.82
CKAP2-202ENST00000378034 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
CKAP2-202ENST00000378034 MLECQ14165 292 aa20.16■□□□□ 0.82
CKAP2-202ENST00000378034 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
CKAP2-202ENST00000378034 EIF2AK4Q9P2K8 1649 aaKnown RBP20.15■□□□□ 0.82
CKAP2-202ENST00000378034 PTPRKQ15262 1439 aa20.15■□□□□ 0.82
CKAP2-202ENST00000378034 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
CKAP2-202ENST00000378034 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
CKAP2-202ENST00000378034 FER1L4A9Z1Z3 1794 aa20.14■□□□□ 0.81
CKAP2-202ENST00000378034 ERBINQ96RT1 1412 aa20.14■□□□□ 0.81
CKAP2-202ENST00000378034 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
CKAP2-202ENST00000378034 KIF3BO15066 747 aa20.12■□□□□ 0.81
CKAP2-202ENST00000378034 ITGAEP38570 1179 aa20.11■□□□□ 0.81
CKAP2-202ENST00000378034 RIMS1Q86UR5 1692 aaKnown RBP20.1■□□□□ 0.81
CKAP2-202ENST00000378034 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
CKAP2-202ENST00000378034 GGT6Q6P531 493 aa20.09■□□□□ 0.81
CKAP2-202ENST00000378034 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms