RNA–Protein interactions for RNA: ENST00000377534.7

LMO7-205, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMO7, Length 4,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-205ENST00000377534 CEP170Q5SW79 1584 aa10.62□□□□□ -0.71
LMO7-205ENST00000377534 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
LMO7-205ENST00000377534 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
LMO7-205ENST00000377534 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
LMO7-205ENST00000377534 RAPGEF6Q8TEU7 1601 aa10.61□□□□□ -0.71
LMO7-205ENST00000377534 TONSLQ96HA7 1378 aa10.61□□□□□ -0.71
LMO7-205ENST00000377534 NUP160Q12769 1436 aa10.6□□□□□ -0.71
LMO7-205ENST00000377534 YTHDC1Q96MU7 727 aaKnown RBP10.6□□□□□ -0.71
LMO7-205ENST00000377534 MIA2Q96PC5 1412 aa10.6□□□□□ -0.71
LMO7-205ENST00000377534 KANK1Q14678 1352 aa10.59□□□□□ -0.71
LMO7-205ENST00000377534 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
LMO7-205ENST00000377534 NUP153P49790 1475 aaKnown RBP10.59□□□□□ -0.71
LMO7-205ENST00000377534 PLB1Q6P1J6 1458 aa10.59□□□□□ -0.71
LMO7-205ENST00000377534 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
LMO7-205ENST00000377534 SCAF1Q9H7N4 1312 aaKnown RBP10.58□□□□□ -0.72
LMO7-205ENST00000377534 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
LMO7-205ENST00000377534 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
LMO7-205ENST00000377534 TROQ12816 1431 aaPredicted RBP10.57□□□□□ -0.72
LMO7-205ENST00000377534 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
LMO7-205ENST00000377534 UACAQ9BZF9 1416 aa10.56□□□□□ -0.72
LMO7-205ENST00000377534 MIER1Q8N108 512 aa10.55□□□□□ -0.72
LMO7-205ENST00000377534 NAIPQ13075 1403 aa10.55□□□□□ -0.72
LMO7-205ENST00000377534 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
LMO7-205ENST00000377534 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
LMO7-205ENST00000377534 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
LMO7-205ENST00000377534 RSPH4AQ5TD94 716 aa10.54□□□□□ -0.72
LMO7-205ENST00000377534 ZNF644Q9H582 1327 aaPredicted RBP10.54□□□□□ -0.72
LMO7-205ENST00000377534 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
LMO7-205ENST00000377534 POGZQ7Z3K3 1410 aa10.53□□□□□ -0.72
LMO7-205ENST00000377534 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
LMO7-205ENST00000377534 GGT6Q6P531 493 aa10.52□□□□□ -0.73
LMO7-205ENST00000377534 DAPK1P53355 1430 aa10.51□□□□□ -0.73
LMO7-205ENST00000377534 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
LMO7-205ENST00000377534 MPHOSPH9Q99550 1183 aa10.5□□□□□ -0.73
LMO7-205ENST00000377534 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
LMO7-205ENST00000377534 EID1Q9Y6B2 187 aa10.49□□□□□ -0.73
LMO7-205ENST00000377534 BCL11AQ9H165 835 aa10.49□□□□□ -0.73
LMO7-205ENST00000377534 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
LMO7-205ENST00000377534 ABCC5O15440 1437 aa10.48□□□□□ -0.73
LMO7-205ENST00000377534 AKNAQ7Z591 1439 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 CAMSAP2Q08AD1 1489 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 ATP10BO94823 1461 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 KIF14Q15058 1648 aa10.47□□□□□ -0.73
LMO7-205ENST00000377534 CHD1O14646 1710 aa10.46□□□□□ -0.73
LMO7-205ENST00000377534 ITSN2Q9NZM3 1697 aa10.46□□□□□ -0.73
LMO7-205ENST00000377534 GPATCH8Q9UKJ3 1502 aaKnown RBP10.46□□□□□ -0.73
LMO7-205ENST00000377534 FOXD1Q16676 465 aa10.46□□□□□ -0.74
LMO7-205ENST00000377534 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.74
LMO7-205ENST00000377534 DDX10Q13206 875 aaKnown RBP10.45□□□□□ -0.74
LMO7-205ENST00000377534 ABCA8O94911 1581 aa10.45□□□□□ -0.74
LMO7-205ENST00000377534 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.747e-6■□□□□ 9.7
LMO7-205ENST00000377534 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
LMO7-205ENST00000377534 TEX14Q8IWB6 1497 aa10.43□□□□□ -0.74
LMO7-205ENST00000377534 GCC2Q8IWJ2 1684 aa10.42□□□□□ -0.74
LMO7-205ENST00000377534 WASHC2CQ9Y4E1 1318 aa10.41□□□□□ -0.74
LMO7-205ENST00000377534 DMRT2Q9Y5R5 561 aa10.4□□□□□ -0.74
LMO7-205ENST00000377534 KIF3BO15066 747 aa10.4□□□□□ -0.74
LMO7-205ENST00000377534 ANP32CO43423 234 aa10.4□□□□□ -0.74
LMO7-205ENST00000377534 PKD2Q13563 968 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 ADCY10Q96PN6 1610 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 NUP155O75694 1391 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 NCOA1Q15788 1441 aa10.39□□□□□ -0.75
LMO7-205ENST00000377534 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
LMO7-205ENST00000377534 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
LMO7-205ENST00000377534 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
LMO7-205ENST00000377534 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
LMO7-205ENST00000377534 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
LMO7-205ENST00000377534 ABCC10Q5T3U5 1492 aa10.37□□□□□ -0.75
LMO7-205ENST00000377534 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
LMO7-205ENST00000377534 KDM6BO15054 1643 aa10.37□□□□□ -0.75
LMO7-205ENST00000377534 ABCC2Q92887 1545 aa10.36□□□□□ -0.75
LMO7-205ENST00000377534 CCDC141Q6ZP82 1450 aa10.34□□□□□ -0.75
LMO7-205ENST00000377534 HSPA5P11021 654 aaKnown RBP10.34□□□□□ -0.75
LMO7-205ENST00000377534 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
LMO7-205ENST00000377534 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
LMO7-205ENST00000377534 ERCC6L2Q5T890 1561 aa10.34□□□□□ -0.75
LMO7-205ENST00000377534 ADGRL2O95490 1459 aa10.33□□□□□ -0.76
LMO7-205ENST00000377534 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
LMO7-205ENST00000377534 SHANK2Q9UPX8 1470 aa10.33□□□□□ -0.76
LMO7-205ENST00000377534 NEFMP07197 916 aa10.33□□□□□ -0.76
LMO7-205ENST00000377534 PLEKHH2Q8IVE3 1493 aa10.33□□□□□ -0.76
LMO7-205ENST00000377534 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
LMO7-205ENST00000377534 KIAA1107Q9UPP5 1409 aa10.32□□□□□ -0.76
LMO7-205ENST00000377534 KDM2AQ9Y2K7 1162 aa10.31□□□□□ -0.76
LMO7-205ENST00000377534 A0A0G2JS52 829 aa10.3□□□□□ -0.76
LMO7-205ENST00000377534 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
LMO7-205ENST00000377534 SENP3Q9H4L4 574 aaPredicted RBP10.3□□□□□ -0.76
LMO7-205ENST00000377534 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
LMO7-205ENST00000377534 RPRD2Q5VT52 1461 aaKnown RBP10.29□□□□□ -0.76
LMO7-205ENST00000377534 POGKQ9P215 609 aa10.29□□□□□ -0.76
LMO7-205ENST00000377534 SYCP2Q9BX26 1530 aa10.29□□□□□ -0.76
LMO7-205ENST00000377534 CROCC2H7BZ55 1655 aa10.28□□□□□ -0.76
LMO7-205ENST00000377534 PZPP20742 1482 aa10.28□□□□□ -0.76
LMO7-205ENST00000377534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.76
LMO7-205ENST00000377534 ARHGEF5Q12774 1597 aa10.28□□□□□ -0.76
LMO7-205ENST00000377534 UHRF1BP1LA0JNW5 1464 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms