RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
CBWD3-203ENST00000377344 PLCH2O75038 1416 aa19.71■□□□□ 0.75
CBWD3-203ENST00000377344 CD109Q6YHK3 1445 aa19.71■□□□□ 0.75
CBWD3-203ENST00000377344 GLI2P10070 1586 aa19.7■□□□□ 0.74
CBWD3-203ENST00000377344 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
CBWD3-203ENST00000377344 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
CBWD3-203ENST00000377344 ITGAEP38570 1179 aa19.67■□□□□ 0.74
CBWD3-203ENST00000377344 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
CBWD3-203ENST00000377344 CAMSAP2Q08AD1 1489 aa19.66■□□□□ 0.74
CBWD3-203ENST00000377344 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
CBWD3-203ENST00000377344 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
CBWD3-203ENST00000377344 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
CBWD3-203ENST00000377344 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
CBWD3-203ENST00000377344 ARAP3Q8WWN8 1544 aa19.64■□□□□ 0.74
CBWD3-203ENST00000377344 FANCAO15360 1455 aa19.64■□□□□ 0.73
CBWD3-203ENST00000377344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.73
CBWD3-203ENST00000377344 SAMD9LQ8IVG5 1584 aa19.62■□□□□ 0.73
CBWD3-203ENST00000377344 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
CBWD3-203ENST00000377344 HNRNPMP52272 730 aaKnown RBP eCLIP19.59■□□□□ 0.73
CBWD3-203ENST00000377344 CFAP74Q9C0B2 1584 aa19.58■□□□□ 0.72
CBWD3-203ENST00000377344 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
CBWD3-203ENST00000377344 PLEKHH2Q8IVE3 1493 aa19.57■□□□□ 0.72
CBWD3-203ENST00000377344 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
CBWD3-203ENST00000377344 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
CBWD3-203ENST00000377344 ABCC1P33527 1531 aa19.55■□□□□ 0.72
CBWD3-203ENST00000377344 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
CBWD3-203ENST00000377344 DNMT1P26358 1616 aaKnown RBP19.54■□□□□ 0.72
CBWD3-203ENST00000377344 DAPK1P53355 1430 aa19.54■□□□□ 0.72
CBWD3-203ENST00000377344 NEO1Q92859 1461 aa19.54■□□□□ 0.72
CBWD3-203ENST00000377344 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
CBWD3-203ENST00000377344 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
CBWD3-203ENST00000377344 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
CBWD3-203ENST00000377344 MBD5Q9P267 1494 aa19.52■□□□□ 0.72
CBWD3-203ENST00000377344 ABCC5O15440 1437 aa19.52■□□□□ 0.72
CBWD3-203ENST00000377344 SCAPERQ9BY12 1400 aa19.52■□□□□ 0.72
CBWD3-203ENST00000377344 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.72
CBWD3-203ENST00000377344 ARHGEF5Q12774 1597 aa19.51■□□□□ 0.71
CBWD3-203ENST00000377344 CCDC141Q6ZP82 1450 aa19.51■□□□□ 0.71
CBWD3-203ENST00000377344 RSPH4AQ5TD94 716 aa19.51■□□□□ 0.71
CBWD3-203ENST00000377344 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
CBWD3-203ENST00000377344 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
CBWD3-203ENST00000377344 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
CBWD3-203ENST00000377344 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
CBWD3-203ENST00000377344 CROCC2H7BZ55 1655 aa19.47■□□□□ 0.71
CBWD3-203ENST00000377344 AFAP1Q8N556 730 aa19.47■□□□□ 0.71
CBWD3-203ENST00000377344 C9orf84Q5VXU9 1444 aa19.45■□□□□ 0.7
CBWD3-203ENST00000377344 DENND4BO75064 1496 aaPredicted RBP19.44■□□□□ 0.7
CBWD3-203ENST00000377344 MYT1LQ9UL68 1186 aa19.44■□□□□ 0.7
CBWD3-203ENST00000377344 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
CBWD3-203ENST00000377344 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
CBWD3-203ENST00000377344 RRP7BPQ9NSQ0 103 aa19.43■□□□□ 0.7
CBWD3-203ENST00000377344 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
CBWD3-203ENST00000377344 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
CBWD3-203ENST00000377344 SPAG9O60271 1321 aaKnown RBP19.42■□□□□ 0.7
CBWD3-203ENST00000377344 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
CBWD3-203ENST00000377344 ANKRD30AQ9BXX3 1397 aa19.4■□□□□ 0.7
CBWD3-203ENST00000377344 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
CBWD3-203ENST00000377344 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
CBWD3-203ENST00000377344 NCOA1Q15788 1441 aa19.37■□□□□ 0.69
CBWD3-203ENST00000377344 ADGRL2O95490 1459 aa19.37■□□□□ 0.69
CBWD3-203ENST00000377344 RICTORQ6R327 1708 aa19.36■□□□□ 0.69
CBWD3-203ENST00000377344 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
CBWD3-203ENST00000377344 KDM5CP41229 1560 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 RTEL1-TNFRSF6BF6WH68 1400 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 NAIPQ13075 1403 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 SETD5Q9C0A6 1442 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
CBWD3-203ENST00000377344 KIF15Q9NS87 1388 aa19.34■□□□□ 0.69
CBWD3-203ENST00000377344 COL17A1Q9UMD9 1497 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-203ENST00000377344 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
CBWD3-203ENST00000377344 INO80Q9ULG1 1556 aaPredicted RBP19.34■□□□□ 0.69
CBWD3-203ENST00000377344 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.68
CBWD3-203ENST00000377344 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
CBWD3-203ENST00000377344 PLXNC1O60486 1568 aa19.31■□□□□ 0.68
CBWD3-203ENST00000377344 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
CBWD3-203ENST00000377344 MLH3Q9UHC1 1453 aa19.31■□□□□ 0.68
CBWD3-203ENST00000377344 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
CBWD3-203ENST00000377344 KDM6BO15054 1643 aa19.3■□□□□ 0.68
CBWD3-203ENST00000377344 ZMYM4Q5VZL5 1548 aa19.28■□□□□ 0.68
CBWD3-203ENST00000377344 ANKRD50Q9ULJ7 1429 aa19.27■□□□□ 0.68
CBWD3-203ENST00000377344 DUOX2Q9NRD8 1548 aa19.26■□□□□ 0.67
CBWD3-203ENST00000377344 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
CBWD3-203ENST00000377344 MAGI2Q86UL8 1455 aa19.24■□□□□ 0.67
CBWD3-203ENST00000377344 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
CBWD3-203ENST00000377344 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
CBWD3-203ENST00000377344 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
CBWD3-203ENST00000377344 A2MP01023 1474 aa19.21■□□□□ 0.67
CBWD3-203ENST00000377344 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
CBWD3-203ENST00000377344 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
CBWD3-203ENST00000377344 HRCP23327 699 aa19.21■□□□□ 0.67
CBWD3-203ENST00000377344 ARHGEF40Q8TER5 1519 aa19.17■□□□□ 0.66
CBWD3-203ENST00000377344 ATP10AO60312 1499 aa19.17■□□□□ 0.66
CBWD3-203ENST00000377344 KIF3BO15066 747 aa19.16■□□□□ 0.66
CBWD3-203ENST00000377344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
CBWD3-203ENST00000377344 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
CBWD3-203ENST00000377344 EIF2AK4Q9P2K8 1649 aaKnown RBP19.13■□□□□ 0.65
CBWD3-203ENST00000377344 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
CBWD3-203ENST00000377344 NUP155O75694 1391 aa19.12■□□□□ 0.65
CBWD3-203ENST00000377344 GGT6Q6P531 493 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms