RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 VPS8Q8N3P4 1428 aa35.01■■■■□ 3.2
SRM-201ENST00000376957 FRMPD1Q5SYB0 1578 aa35■■■■□ 3.19
SRM-201ENST00000376957 PREX2Q70Z35 1606 aa34.98■■■■□ 3.19
SRM-201ENST00000376957 CDC42BPBQ9Y5S2 1711 aa34.96■■■■□ 3.19
SRM-201ENST00000376957 POGZQ7Z3K3 1410 aa34.95■■■■□ 3.19
SRM-201ENST00000376957 MAGI2Q86UL8 1455 aa34.95■■■■□ 3.19
SRM-201ENST00000376957 CCNB3Q8WWL7 1395 aa34.94■■■■□ 3.18
SRM-201ENST00000376957 EHBP1L1Q8N3D4 1523 aa34.94■■■■□ 3.18
SRM-201ENST00000376957 ZMYM4Q5VZL5 1548 aa34.92■■■■□ 3.18
SRM-201ENST00000376957 CDC42BPAQ5VT25 1732 aa34.91■■■■□ 3.18
SRM-201ENST00000376957 ZNF518AQ6AHZ1 1483 aa34.9■■■■□ 3.18
SRM-201ENST00000376957 ARID4BQ4LE39 1312 aaPredicted RBP34.9■■■■□ 3.18
SRM-201ENST00000376957 MYT1LQ9UL68 1186 aa34.88■■■■□ 3.17
SRM-201ENST00000376957 ZFYVE16Q7Z3T8 1539 aa34.87■■■■□ 3.17
SRM-201ENST00000376957 CFDP1Q9UEE9 299 aaPredicted RBP34.87■■■■□ 3.17
SRM-201ENST00000376957 ZNF777Q9ULD5 760 aaPredicted RBP34.87■■■■□ 3.17
SRM-201ENST00000376957 ARHGEF40Q8TER5 1519 aa34.86■■■■□ 3.17
SRM-201ENST00000376957 GPATCH8Q9UKJ3 1502 aaKnown RBP34.86■■■■□ 3.17
SRM-201ENST00000376957 APLP2Q06481 763 aa34.85■■■■□ 3.17
SRM-201ENST00000376957 TIAM1Q13009 1591 aa34.83■■■■□ 3.17
SRM-201ENST00000376957 AFAP1Q8N556 730 aa34.81■■■■□ 3.16
SRM-201ENST00000376957 ABCC1P33527 1531 aa34.79■■■■□ 3.16
SRM-201ENST00000376957 SUPT6HQ7KZ85 1726 aaKnown RBP34.78■■■■□ 3.16
SRM-201ENST00000376957 PLEKHH2Q8IVE3 1493 aa34.78■■■■□ 3.16
SRM-201ENST00000376957 MAP3K1Q13233 1512 aa34.77■■■■□ 3.16
SRM-201ENST00000376957 ITSN2Q9NZM3 1697 aa34.77■■■■□ 3.16
SRM-201ENST00000376957 KDM5CP41229 1560 aa34.74■■■■□ 3.15
SRM-201ENST00000376957 YEATS2Q9ULM3 1422 aa34.74■■■■□ 3.15
SRM-201ENST00000376957 ATP10AO60312 1499 aa34.72■■■■□ 3.15
SRM-201ENST00000376957 LRRC9Q6ZRR7 1453 aa34.71■■■■□ 3.15
SRM-201ENST00000376957 HECW2Q9P2P5 1572 aa34.7■■■■□ 3.15
SRM-201ENST00000376957 KIAA1107Q9UPP5 1409 aa34.7■■■■□ 3.15
SRM-201ENST00000376957 SAMD9LQ8IVG5 1584 aa34.7■■■■□ 3.14
SRM-201ENST00000376957 NCOA2Q15596 1464 aa34.69■■■■□ 3.14
SRM-201ENST00000376957 C9orf84Q5VXU9 1444 aa34.68■■■■□ 3.14
SRM-201ENST00000376957 MLH3Q9UHC1 1453 aa34.68■■■■□ 3.14
SRM-201ENST00000376957 TRAPPC8Q9Y2L5 1435 aa34.68■■■■□ 3.14
SRM-201ENST00000376957 ARHGEF12Q9NZN5 1544 aa34.67■■■■□ 3.14
SRM-201ENST00000376957 BCORL1Q5H9F3 1711 aa34.66■■■■□ 3.14
SRM-201ENST00000376957 HNRNPMP52272 730 aaKnown RBP eCLIP34.65■■■■□ 3.14
SRM-201ENST00000376957 SYCP2Q9BX26 1530 aa34.65■■■■□ 3.14
SRM-201ENST00000376957 ADAMTSL3P82987 1691 aa34.62■■■■□ 3.13
SRM-201ENST00000376957 SPAG9O60271 1321 aaKnown RBP34.6■■■■□ 3.13
SRM-201ENST00000376957 KANK4Q5T7N3 995 aaPredicted RBP34.56■■■■□ 3.12
SRM-201ENST00000376957 RSPH4AQ5TD94 716 aa34.56■■■■□ 3.12
SRM-201ENST00000376957 MLECQ14165 292 aa34.55■■■■□ 3.12
SRM-201ENST00000376957 DIP2CQ9Y2E4 1556 aa34.53■■■■□ 3.12
SRM-201ENST00000376957 ZNF644Q9H582 1327 aaPredicted RBP34.53■■■■□ 3.12
SRM-201ENST00000376957 REREQ9P2R6 1566 aa34.51■■■■□ 3.12
SRM-201ENST00000376957 MADDQ8WXG6 1647 aa34.51■■■■□ 3.11
SRM-201ENST00000376957 PTPRMP28827 1452 aa34.51■■■■□ 3.11
SRM-201ENST00000376957 KIDINS220Q9ULH0 1771 aa34.5■■■■□ 3.11
SRM-201ENST00000376957 ABCA6Q8N139 1617 aa34.5■■■■□ 3.11
SRM-201ENST00000376957 CAMSAP2Q08AD1 1489 aa34.46■■■■□ 3.11
SRM-201ENST00000376957 ATP7AQ04656 1500 aa34.46■■■■□ 3.11
SRM-201ENST00000376957 SIGLEC1Q9BZZ2 1709 aa34.45■■■■□ 3.11
SRM-201ENST00000376957 ESF1Q9H501 851 aaKnown RBP34.43■■■■□ 3.1
SRM-201ENST00000376957 MYOM3Q5VTT5 1437 aa34.43■■■■□ 3.1
SRM-201ENST00000376957 MBD5Q9P267 1494 aa34.43■■■■□ 3.1
SRM-201ENST00000376957 RIMS1Q86UR5 1692 aaKnown RBP34.43■■■■□ 3.1
SRM-201ENST00000376957 MIA2Q96PC5 1412 aa34.42■■■■□ 3.1
SRM-201ENST00000376957 AGLP35573 1532 aa34.41■■■■□ 3.1
SRM-201ENST00000376957 TSPY4P0CV99 314 aa34.41■■■■□ 3.1
SRM-201ENST00000376957 TSPY10P0CW01 314 aa34.41■■■■□ 3.1
SRM-201ENST00000376957 FER1L4A9Z1Z3 1794 aa34.4■■■■□ 3.1
SRM-201ENST00000376957 INO80Q9ULG1 1556 aaPredicted RBP34.4■■■■□ 3.1
SRM-201ENST00000376957 CCDC141Q6ZP82 1450 aa34.39■■■■□ 3.1
SRM-201ENST00000376957 RTEL1-TNFRSF6BF6WH68 1400 aa34.39■■■■□ 3.1
SRM-201ENST00000376957 A2MP01023 1474 aa34.33■■■■□ 3.09
SRM-201ENST00000376957 ARHGEF5Q12774 1597 aa34.32■■■■□ 3.09
SRM-201ENST00000376957 ADGBQ8N7X0 1667 aa34.31■■■■□ 3.08
SRM-201ENST00000376957 PLPPR3Q6T4P5 718 aa34.31■■■■□ 3.08
SRM-201ENST00000376957 CNTLNQ9NXG0 1405 aa34.22■■■■□ 3.07
SRM-201ENST00000376957 PLXNC1O60486 1568 aa34.21■■■■□ 3.07
SRM-201ENST00000376957 DHX29Q7Z478 1369 aaKnown RBP34.21■■■■□ 3.07
SRM-201ENST00000376957 PPP6R1Q9UPN7 881 aa34.19■■■■□ 3.06
SRM-201ENST00000376957 PTPN23Q9H3S7 1636 aa34.19■■■■□ 3.06
SRM-201ENST00000376957 GGT6Q6P531 493 aa34.17■■■■□ 3.06
SRM-201ENST00000376957 FGD6Q6ZV73 1430 aa34.17■■■■□ 3.06
SRM-201ENST00000376957 MAST1Q9Y2H9 1570 aa34.13■■■■□ 3.05
SRM-201ENST00000376957 CEBPAP49715 358 aaPredicted RBP34.12■■■■□ 3.05
SRM-201ENST00000376957 KIF3BO15066 747 aa34.1■■■■□ 3.05
SRM-201ENST00000376957 TCOF1Q13428 1488 aaKnown RBP34.09■■■■□ 3.05
SRM-201ENST00000376957 MROH2AA6NES4 1674 aa34.05■■■■□ 3.04
SRM-201ENST00000376957 SETD1BQ9UPS6 1966 aaKnown RBP34.04■■■■□ 3.04
SRM-201ENST00000376957 C3P01024 1663 aa34.04■■■■□ 3.04
SRM-201ENST00000376957 SHANK2Q9UPX8 1470 aa34.04■■■■□ 3.04
SRM-201ENST00000376957 LMTK3Q96Q04 1460 aa34.03■■■■□ 3.04
SRM-201ENST00000376957 FAM50AQ14320 339 aaKnown RBP34.03■■■■□ 3.04
SRM-201ENST00000376957 ZMYM3Q14202 1370 aa34.02■■■■□ 3.04
SRM-201ENST00000376957 ABCC5O15440 1437 aa34.01■■■■□ 3.03
SRM-201ENST00000376957 DAPK1P53355 1430 aa34.01■■■■□ 3.03
SRM-201ENST00000376957 DNMT1P26358 1616 aaKnown RBP34.01■■■■□ 3.03
SRM-201ENST00000376957 PREX1Q8TCU6 1659 aa34■■■■□ 3.03
SRM-201ENST00000376957 CROCC2H7BZ55 1655 aa33.99■■■■□ 3.03
SRM-201ENST00000376957 CLTCQ00610 1675 aaKnown RBP33.99■■■■□ 3.03
SRM-201ENST00000376957 UHRF1BP1Q6BDS2 1440 aa33.98■■■■□ 3.03
SRM-201ENST00000376957 DUOX2Q9NRD8 1548 aa33.96■■■■□ 3.03
SRM-201ENST00000376957 FAM135AQ9P2D6 1515 aa33.96■■■■□ 3.03
SRM-201ENST00000376957 WASHC2CQ9Y4E1 1318 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms