RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.96■■■■□ 3.19
HLA-C-202ENST00000376237 EFCAB2Q5VUJ9 269 aa34.96■■■■□ 3.19
HLA-C-202ENST00000376237 ARHGAP5Q13017 1502 aa34.94■■■■□ 3.18
HLA-C-202ENST00000376237 MAP3K4Q9Y6R4 1608 aa34.92■■■■□ 3.18
HLA-C-202ENST00000376237 CDC42BPBQ9Y5S2 1711 aa34.92■■■■□ 3.18
HLA-C-202ENST00000376237 TCOF1Q13428 1488 aaKnown RBP34.91■■■■□ 3.18
HLA-C-202ENST00000376237 PTPN23Q9H3S7 1636 aa34.91■■■■□ 3.18
HLA-C-202ENST00000376237 ZNF777Q9ULD5 760 aaPredicted RBP34.9■■■■□ 3.18
HLA-C-202ENST00000376237 FAM50AQ14320 339 aaKnown RBP34.89■■■■□ 3.18
HLA-C-202ENST00000376237 FANCAO15360 1455 aa34.86■■■■□ 3.17
HLA-C-202ENST00000376237 KIF13AQ9H1H9 1805 aa34.85■■■■□ 3.17
HLA-C-202ENST00000376237 ZNF644Q9H582 1327 aaPredicted RBP34.84■■■■□ 3.17
HLA-C-202ENST00000376237 CAMSAP2Q08AD1 1489 aa34.83■■■■□ 3.17
HLA-C-202ENST00000376237 PLEKHH2Q8IVE3 1493 aa34.83■■■■□ 3.17
HLA-C-202ENST00000376237 TRHP20396 242 aaPredicted RBP34.8■■■■□ 3.16
HLA-C-202ENST00000376237 CFAP74Q9C0B2 1584 aa34.79■■■■□ 3.16
HLA-C-202ENST00000376237 KIAA1107Q9UPP5 1409 aa34.78■■■■□ 3.16
HLA-C-202ENST00000376237 SAMD9LQ8IVG5 1584 aa34.78■■■■□ 3.16
HLA-C-202ENST00000376237 NEO1Q92859 1461 aa34.78■■■■□ 3.16
HLA-C-202ENST00000376237 TEX14Q8IWB6 1497 aa34.77■■■■□ 3.16
HLA-C-202ENST00000376237 RSPH4AQ5TD94 716 aa34.76■■■■□ 3.15
HLA-C-202ENST00000376237 AKNAQ7Z591 1439 aa34.75■■■■□ 3.15
HLA-C-202ENST00000376237 HNRNPMP52272 730 aaKnown RBP eCLIP34.7■■■■□ 3.14
HLA-C-202ENST00000376237 ABCC1P33527 1531 aa34.69■■■■□ 3.14
HLA-C-202ENST00000376237 ADGRL1O94910 1474 aa34.69■■■■□ 3.14
HLA-C-202ENST00000376237 MBD5Q9P267 1494 aa34.68■■■■□ 3.14
HLA-C-202ENST00000376237 PCGF6Q9BYE7 350 aa34.67■■■■□ 3.14
HLA-C-202ENST00000376237 ARHGEF5Q12774 1597 aa34.66■■■■□ 3.14
HLA-C-202ENST00000376237 PPRC1Q5VV67 1664 aaKnown RBP34.66■■■■□ 3.14
HLA-C-202ENST00000376237 SYCP2Q9BX26 1530 aa34.66■■■■□ 3.14
HLA-C-202ENST00000376237 SCAPERQ9BY12 1400 aa34.65■■■■□ 3.14
HLA-C-202ENST00000376237 ITGAEP38570 1179 aa34.65■■■■□ 3.14
HLA-C-202ENST00000376237 DAPK1P53355 1430 aa34.64■■■■□ 3.14
HLA-C-202ENST00000376237 TSPOAP1O95153 1857 aa34.64■■■■□ 3.14
HLA-C-202ENST00000376237 DNMT1P26358 1616 aaKnown RBP34.64■■■■□ 3.14
HLA-C-202ENST00000376237 ABCC5O15440 1437 aa34.64■■■■□ 3.14
HLA-C-202ENST00000376237 ARHGEF12Q9NZN5 1544 aa34.63■■■■□ 3.13
HLA-C-202ENST00000376237 CCDC141Q6ZP82 1450 aa34.61■■■■□ 3.13
HLA-C-202ENST00000376237 TSPY4P0CV99 314 aa34.6■■■■□ 3.13
HLA-C-202ENST00000376237 TSPY10P0CW01 314 aa34.6■■■■□ 3.13
HLA-C-202ENST00000376237 TRAPPC8Q9Y2L5 1435 aa34.55■■■■□ 3.12
HLA-C-202ENST00000376237 PTPRKQ15262 1439 aa34.55■■■■□ 3.12
HLA-C-202ENST00000376237 DENND4BO75064 1496 aaPredicted RBP34.55■■■■□ 3.12
HLA-C-202ENST00000376237 SHANK2Q9UPX8 1470 aa34.55■■■■□ 3.12
HLA-C-202ENST00000376237 ZNF518AQ6AHZ1 1483 aa34.52■■■■□ 3.12
HLA-C-202ENST00000376237 AFAP1Q8N556 730 aa34.51■■■■□ 3.12
HLA-C-202ENST00000376237 POGZQ7Z3K3 1410 aa34.51■■■■□ 3.11
HLA-C-202ENST00000376237 C9orf84Q5VXU9 1444 aa34.49■■■■□ 3.11
HLA-C-202ENST00000376237 CROCC2H7BZ55 1655 aa34.48■■■■□ 3.11
HLA-C-202ENST00000376237 ROCK1Q13464 1354 aa34.48■■■■□ 3.11
HLA-C-202ENST00000376237 CHIC2Q9UKJ5 165 aa34.47■■■■□ 3.11
HLA-C-202ENST00000376237 SPAG9O60271 1321 aaKnown RBP34.45■■■■□ 3.11
HLA-C-202ENST00000376237 MAST1Q9Y2H9 1570 aa34.44■■■■□ 3.1
HLA-C-202ENST00000376237 RTEL1-TNFRSF6BF6WH68 1400 aa34.44■■■■□ 3.1
HLA-C-202ENST00000376237 ADGRL2O95490 1459 aa34.43■■■■□ 3.1
HLA-C-202ENST00000376237 RAPGEF3O95398 923 aa34.43■■■■□ 3.1
HLA-C-202ENST00000376237 ANKRD30AQ9BXX3 1397 aa34.42■■■■□ 3.1
HLA-C-202ENST00000376237 KDM5CP41229 1560 aa34.4■■■■□ 3.1
HLA-C-202ENST00000376237 NCOA1Q15788 1441 aa34.4■■■■□ 3.1
HLA-C-202ENST00000376237 RICTORQ6R327 1708 aa34.36■■■■□ 3.09
HLA-C-202ENST00000376237 MLH3Q9UHC1 1453 aa34.36■■■■□ 3.09
HLA-C-202ENST00000376237 HFM1A2PYH4 1435 aa34.36■■■■□ 3.09
HLA-C-202ENST00000376237 ADGBQ8N7X0 1667 aa34.35■■■■□ 3.09
HLA-C-202ENST00000376237 COL17A1Q9UMD9 1497 aaPredicted RBP34.34■■■■□ 3.09
HLA-C-202ENST00000376237 RRP7BPQ9NSQ0 103 aa34.34■■■■□ 3.09
HLA-C-202ENST00000376237 MYT1LQ9UL68 1186 aa34.33■■■■□ 3.09
HLA-C-202ENST00000376237 ZFYVE16Q7Z3T8 1539 aa34.32■■■■□ 3.08
HLA-C-202ENST00000376237 ATP7AQ04656 1500 aa34.31■■■■□ 3.08
HLA-C-202ENST00000376237 FRMPD1Q5SYB0 1578 aa34.31■■■■□ 3.08
HLA-C-202ENST00000376237 INO80Q9ULG1 1556 aaPredicted RBP34.31■■■■□ 3.08
HLA-C-202ENST00000376237 NAIPQ13075 1403 aa34.31■■■■□ 3.08
HLA-C-202ENST00000376237 ZMYM4Q5VZL5 1548 aa34.3■■■■□ 3.08
HLA-C-202ENST00000376237 PLXNC1O60486 1568 aa34.29■■■■□ 3.08
HLA-C-202ENST00000376237 MAGI2Q86UL8 1455 aa34.29■■■■□ 3.08
HLA-C-202ENST00000376237 SETD5Q9C0A6 1442 aa34.29■■■■□ 3.08
HLA-C-202ENST00000376237 HECW2Q9P2P5 1572 aa34.29■■■■□ 3.08
HLA-C-202ENST00000376237 KIF15Q9NS87 1388 aa34.28■■■■□ 3.08
HLA-C-202ENST00000376237 KIDINS220Q9ULH0 1771 aa34.24■■■■□ 3.07
HLA-C-202ENST00000376237 KDM6BO15054 1643 aa34.24■■■■□ 3.07
HLA-C-202ENST00000376237 HRCP23327 699 aa34.22■■■■□ 3.07
HLA-C-202ENST00000376237 GCC2Q8IWJ2 1684 aa34.21■■■■□ 3.07
HLA-C-202ENST00000376237 DUOX2Q9NRD8 1548 aa34.2■■■■□ 3.06
HLA-C-202ENST00000376237 ANKRD50Q9ULJ7 1429 aa34.19■■■■□ 3.06
HLA-C-202ENST00000376237 ACIN1Q9UKV3 1341 aaKnown RBP34.18■■■■□ 3.06
HLA-C-202ENST00000376237 RAB3GAP2Q9H2M9 1393 aa34.17■■■■□ 3.06
HLA-C-202ENST00000376237 DHX29Q7Z478 1369 aaKnown RBP34.13■■■■□ 3.05
HLA-C-202ENST00000376237 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
HLA-C-202ENST00000376237 YEATS2Q9ULM3 1422 aa34.13■■■■□ 3.05
HLA-C-202ENST00000376237 A2MP01023 1474 aa34.1■■■■□ 3.05
HLA-C-202ENST00000376237 ABCA6Q8N139 1617 aa34.1■■■■□ 3.05
HLA-C-202ENST00000376237 DIP2CQ9Y2E4 1556 aa34.1■■■■□ 3.05
HLA-C-202ENST00000376237 ATP10AO60312 1499 aa34.08■■■■□ 3.05
HLA-C-202ENST00000376237 ARHGEF40Q8TER5 1519 aa34.03■■■■□ 3.04
HLA-C-202ENST00000376237 REREQ9P2R6 1566 aa34■■■■□ 3.03
HLA-C-202ENST00000376237 EIF2AK4Q9P2K8 1649 aaKnown RBP33.98■■■■□ 3.03
HLA-C-202ENST00000376237 KIF3BO15066 747 aa33.96■■■■□ 3.03
HLA-C-202ENST00000376237 TRIM52Q96A61 297 aa33.94■■■■□ 3.02
HLA-C-202ENST00000376237 AGLP35573 1532 aa33.91■■■■□ 3.02
HLA-C-202ENST00000376237 BCORL1Q5H9F3 1711 aa33.89■■■■□ 3.02
HLA-C-202ENST00000376237 NUP155O75694 1391 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms