RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
SHROOM4-202ENST00000376020 CENPQQ7L2Z9 268 aaPredicted RBP11.16□□□□□ -0.62
SHROOM4-202ENST00000376020 CFDP1Q9UEE9 299 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 DHX57Q6P158 1386 aaKnown RBP11.15□□□□□ -0.62
SHROOM4-202ENST00000376020 SOGA1O94964 1423 aa11.15□□□□□ -0.63
SHROOM4-202ENST00000376020 B4GALNT3Q6L9W6 998 aa11.14□□□□□ -0.63
SHROOM4-202ENST00000376020 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
SHROOM4-202ENST00000376020 KANK1Q14678 1352 aa11.14□□□□□ -0.63
SHROOM4-202ENST00000376020 CGNL1Q0VF96 1302 aa11.14□□□□□ -0.63
SHROOM4-202ENST00000376020 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
SHROOM4-202ENST00000376020 IRX6P78412 446 aaPredicted RBP11.13□□□□□ -0.63
SHROOM4-202ENST00000376020 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
SHROOM4-202ENST00000376020 ANKRD30AQ9BXX3 1397 aa11.13□□□□□ -0.63
SHROOM4-202ENST00000376020 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
SHROOM4-202ENST00000376020 CCDC34Q96HJ3 373 aa11.12□□□□□ -0.63
SHROOM4-202ENST00000376020 CUX2O14529 1486 aa11.12□□□□□ -0.63
SHROOM4-202ENST00000376020 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
SHROOM4-202ENST00000376020 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
SHROOM4-202ENST00000376020 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
SHROOM4-202ENST00000376020 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
SHROOM4-202ENST00000376020 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
SHROOM4-202ENST00000376020 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
SHROOM4-202ENST00000376020 WASHC2AQ641Q2 1341 aa11.1□□□□□ -0.63
SHROOM4-202ENST00000376020 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
SHROOM4-202ENST00000376020 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
SHROOM4-202ENST00000376020 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
SHROOM4-202ENST00000376020 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
SHROOM4-202ENST00000376020 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
SHROOM4-202ENST00000376020 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
SHROOM4-202ENST00000376020 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
SHROOM4-202ENST00000376020 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
SHROOM4-202ENST00000376020 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
SHROOM4-202ENST00000376020 MIA2Q96PC5 1412 aa11.08□□□□□ -0.64
SHROOM4-202ENST00000376020 MAP3K1Q13233 1512 aa11.07□□□□□ -0.64
SHROOM4-202ENST00000376020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHROOM4-202ENST00000376020 RGS3P49796 1198 aa11.07□□□□□ -0.64
SHROOM4-202ENST00000376020 SUPT6HQ7KZ85 1726 aaKnown RBP11.07□□□□□ -0.64
SHROOM4-202ENST00000376020 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
SHROOM4-202ENST00000376020 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
SHROOM4-202ENST00000376020 ARXQ96QS3 562 aa11.06□□□□□ -0.64
SHROOM4-202ENST00000376020 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
SHROOM4-202ENST00000376020 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
SHROOM4-202ENST00000376020 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
SHROOM4-202ENST00000376020 DHX8Q14562 1220 aaKnown RBP11.05□□□□□ -0.64
SHROOM4-202ENST00000376020 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
SHROOM4-202ENST00000376020 ST18O60284 1047 aa11.04□□□□□ -0.64
SHROOM4-202ENST00000376020 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
SHROOM4-202ENST00000376020 FBLN2P98095 1184 aa11.03□□□□□ -0.64
SHROOM4-202ENST00000376020 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
SHROOM4-202ENST00000376020 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
SHROOM4-202ENST00000376020 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.64
SHROOM4-202ENST00000376020 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.64
SHROOM4-202ENST00000376020 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 TPM4P67936 248 aa11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 TPM2P07951 284 aa11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 TAF3Q5VWG9 929 aa11.02□□□□□ -0.65
SHROOM4-202ENST00000376020 HMMRO75330 724 aa11.01□□□□□ -0.65
SHROOM4-202ENST00000376020 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
SHROOM4-202ENST00000376020 A0A0U1RQG5 324 aaPredicted RBP11.01□□□□□ -0.65
SHROOM4-202ENST00000376020 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
SHROOM4-202ENST00000376020 GOLGA6L1Q8N7Z2 621 aa11□□□□□ -0.65
SHROOM4-202ENST00000376020 CHMP7Q8WUX9 453 aaPredicted RBP11□□□□□ -0.65
SHROOM4-202ENST00000376020 PDIA4P13667 645 aaKnown RBP11□□□□□ -0.65
SHROOM4-202ENST00000376020 TPM3P06753 285 aa11□□□□□ -0.65
SHROOM4-202ENST00000376020 ROCK1Q13464 1354 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 PDE4AP27815 886 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 RRP9O43818 475 aaKnown RBP10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 GPS2Q13227 327 aa10.99□□□□□ -0.65
SHROOM4-202ENST00000376020 E9PSI1 815 aa10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 KIAA1211Q6ZU35 1233 aa10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 TNNT3P45378 269 aaPredicted RBP10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 MRE11P49959 708 aa10.98□□□□□ -0.65
SHROOM4-202ENST00000376020 CENPJQ9HC77 1338 aaPredicted RBP10.97□□□□□ -0.65
SHROOM4-202ENST00000376020 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
SHROOM4-202ENST00000376020 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
SHROOM4-202ENST00000376020 PDS5BQ9NTI5 1447 aa10.96□□□□□ -0.65
SHROOM4-202ENST00000376020 REC8O95072 547 aa10.96□□□□□ -0.65
SHROOM4-202ENST00000376020 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.66
SHROOM4-202ENST00000376020 HIRIP3Q9BW71 556 aaPredicted RBP10.96□□□□□ -0.66
SHROOM4-202ENST00000376020 USP47Q96K76 1375 aa10.96□□□□□ -0.66
SHROOM4-202ENST00000376020 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.66
SHROOM4-202ENST00000376020 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
SHROOM4-202ENST00000376020 TIAM1Q13009 1591 aa10.95□□□□□ -0.66
SHROOM4-202ENST00000376020 FGD6Q6ZV73 1430 aa10.95□□□□□ -0.66
SHROOM4-202ENST00000376020 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
SHROOM4-202ENST00000376020 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
SHROOM4-202ENST00000376020 NUCB2P80303 420 aa10.94□□□□□ -0.66
SHROOM4-202ENST00000376020 DRC7Q8IY82 874 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms