RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 SUPT6HQ7KZ85 1726 aaKnown RBP18.85■□□□□ 0.61
CLIC1-207ENST00000375780 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
CLIC1-207ENST00000375780 DENND4BO75064 1496 aaPredicted RBP18.84■□□□□ 0.61
CLIC1-207ENST00000375780 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
CLIC1-207ENST00000375780 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.61
CLIC1-207ENST00000375780 FRMPD1Q5SYB0 1578 aa18.83■□□□□ 0.6
CLIC1-207ENST00000375780 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
CLIC1-207ENST00000375780 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
CLIC1-207ENST00000375780 APLP2Q06481 763 aa18.81■□□□□ 0.6
CLIC1-207ENST00000375780 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
CLIC1-207ENST00000375780 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
CLIC1-207ENST00000375780 ZMYM4Q5VZL5 1548 aa18.78■□□□□ 0.6
CLIC1-207ENST00000375780 RAPGEF3O95398 923 aa18.78■□□□□ 0.6
CLIC1-207ENST00000375780 ABCC1P33527 1531 aa18.77■□□□□ 0.6
CLIC1-207ENST00000375780 NCOA2Q15596 1464 aa18.77■□□□□ 0.6
CLIC1-207ENST00000375780 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
CLIC1-207ENST00000375780 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
CLIC1-207ENST00000375780 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
CLIC1-207ENST00000375780 MAGI2Q86UL8 1455 aa18.73■□□□□ 0.59
CLIC1-207ENST00000375780 PLEKHH2Q8IVE3 1493 aa18.73■□□□□ 0.59
CLIC1-207ENST00000375780 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
CLIC1-207ENST00000375780 ARHGEF40Q8TER5 1519 aa18.73■□□□□ 0.59
CLIC1-207ENST00000375780 KDM5CP41229 1560 aa18.72■□□□□ 0.59
CLIC1-207ENST00000375780 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
CLIC1-207ENST00000375780 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
CLIC1-207ENST00000375780 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
CLIC1-207ENST00000375780 KIAA1107Q9UPP5 1409 aa18.69■□□□□ 0.58
CLIC1-207ENST00000375780 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
CLIC1-207ENST00000375780 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
CLIC1-207ENST00000375780 HECW2Q9P2P5 1572 aa18.68■□□□□ 0.58
CLIC1-207ENST00000375780 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
CLIC1-207ENST00000375780 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.57
CLIC1-207ENST00000375780 MYOM3Q5VTT5 1437 aa18.64■□□□□ 0.57
CLIC1-207ENST00000375780 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
CLIC1-207ENST00000375780 YEATS2Q9ULM3 1422 aa18.63■□□□□ 0.57
CLIC1-207ENST00000375780 CAMSAP2Q08AD1 1489 aa18.63■□□□□ 0.57
CLIC1-207ENST00000375780 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
CLIC1-207ENST00000375780 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
CLIC1-207ENST00000375780 HNRNPMP52272 730 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLIC1-207ENST00000375780 ATP10AO60312 1499 aa18.59■□□□□ 0.57
CLIC1-207ENST00000375780 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
CLIC1-207ENST00000375780 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
CLIC1-207ENST00000375780 MBD5Q9P267 1494 aa18.59■□□□□ 0.57
CLIC1-207ENST00000375780 ABCA6Q8N139 1617 aa18.58■□□□□ 0.57
CLIC1-207ENST00000375780 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.56
CLIC1-207ENST00000375780 MYT1LQ9UL68 1186 aa18.58■□□□□ 0.56
CLIC1-207ENST00000375780 INO80Q9ULG1 1556 aaPredicted RBP18.58■□□□□ 0.56
CLIC1-207ENST00000375780 ARHGEF5Q12774 1597 aa18.57■□□□□ 0.56
CLIC1-207ENST00000375780 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
CLIC1-207ENST00000375780 ATP7AQ04656 1500 aa18.57■□□□□ 0.56
CLIC1-207ENST00000375780 CCDC141Q6ZP82 1450 aa18.56■□□□□ 0.56
CLIC1-207ENST00000375780 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
CLIC1-207ENST00000375780 BCORL1Q5H9F3 1711 aa18.56■□□□□ 0.56
CLIC1-207ENST00000375780 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
CLIC1-207ENST00000375780 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
CLIC1-207ENST00000375780 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
CLIC1-207ENST00000375780 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
CLIC1-207ENST00000375780 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
CLIC1-207ENST00000375780 FGD6Q6ZV73 1430 aa18.53■□□□□ 0.56
CLIC1-207ENST00000375780 ADAMTSL3P82987 1691 aa18.52■□□□□ 0.56
CLIC1-207ENST00000375780 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
CLIC1-207ENST00000375780 RTEL1-TNFRSF6BF6WH68 1400 aa18.51■□□□□ 0.55
CLIC1-207ENST00000375780 ADGBQ8N7X0 1667 aa18.51■□□□□ 0.55
CLIC1-207ENST00000375780 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
CLIC1-207ENST00000375780 AGLP35573 1532 aa18.49■□□□□ 0.55
CLIC1-207ENST00000375780 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
CLIC1-207ENST00000375780 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
CLIC1-207ENST00000375780 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
CLIC1-207ENST00000375780 PLXNC1O60486 1568 aa18.46■□□□□ 0.55
CLIC1-207ENST00000375780 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
CLIC1-207ENST00000375780 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
CLIC1-207ENST00000375780 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
CLIC1-207ENST00000375780 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
CLIC1-207ENST00000375780 A2MP01023 1474 aa18.45■□□□□ 0.54
CLIC1-207ENST00000375780 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
CLIC1-207ENST00000375780 RIMS1Q86UR5 1692 aaKnown RBP18.42■□□□□ 0.54
CLIC1-207ENST00000375780 ABCC5O15440 1437 aa18.4■□□□□ 0.54
CLIC1-207ENST00000375780 DAPK1P53355 1430 aa18.4■□□□□ 0.54
CLIC1-207ENST00000375780 MLECQ14165 292 aa18.39■□□□□ 0.53
CLIC1-207ENST00000375780 PTPRMP28827 1452 aa18.39■□□□□ 0.53
CLIC1-207ENST00000375780 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
CLIC1-207ENST00000375780 DHX29Q7Z478 1369 aaKnown RBP18.38■□□□□ 0.53
CLIC1-207ENST00000375780 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
CLIC1-207ENST00000375780 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
CLIC1-207ENST00000375780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.33■□□□□ 0.532e-12■■■□□ 15.8
CLIC1-207ENST00000375780 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
CLIC1-207ENST00000375780 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
CLIC1-207ENST00000375780 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
CLIC1-207ENST00000375780 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
CLIC1-207ENST00000375780 ADGRL2O95490 1459 aa18.31■□□□□ 0.52
CLIC1-207ENST00000375780 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
CLIC1-207ENST00000375780 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
CLIC1-207ENST00000375780 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
CLIC1-207ENST00000375780 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
CLIC1-207ENST00000375780 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
CLIC1-207ENST00000375780 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
CLIC1-207ENST00000375780 KIF3BO15066 747 aa18.28■□□□□ 0.52
CLIC1-207ENST00000375780 C3P01024 1663 aa18.28■□□□□ 0.52
CLIC1-207ENST00000375780 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
CLIC1-207ENST00000375780 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms