RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
C6orf48-203ENST00000375638 RAPGEF3O95398 923 aa27.34■■□□□ 1.97
C6orf48-203ENST00000375638 GPATCH8Q9UKJ3 1502 aaKnown RBP27.32■■□□□ 1.96
C6orf48-203ENST00000375638 DENND4BO75064 1496 aaPredicted RBP27.31■■□□□ 1.96
C6orf48-203ENST00000375638 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
C6orf48-203ENST00000375638 CFDP1Q9UEE9 299 aaPredicted RBP27.3■■□□□ 1.96
C6orf48-203ENST00000375638 SCAPERQ9BY12 1400 aa27.29■■□□□ 1.96
C6orf48-203ENST00000375638 PREX2Q70Z35 1606 aa27.29■■□□□ 1.96
C6orf48-203ENST00000375638 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
C6orf48-203ENST00000375638 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
C6orf48-203ENST00000375638 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
C6orf48-203ENST00000375638 CDC42BPAQ5VT25 1732 aa27.26■■□□□ 1.95
C6orf48-203ENST00000375638 SUPT6HQ7KZ85 1726 aaKnown RBP27.26■■□□□ 1.95
C6orf48-203ENST00000375638 POGZQ7Z3K3 1410 aa27.19■■□□□ 1.94
C6orf48-203ENST00000375638 FRMPD1Q5SYB0 1578 aa27.18■■□□□ 1.94
C6orf48-203ENST00000375638 AFAP1Q8N556 730 aa27.16■■□□□ 1.94
C6orf48-203ENST00000375638 RICTORQ6R327 1708 aa27.16■■□□□ 1.94
C6orf48-203ENST00000375638 ITSN2Q9NZM3 1697 aa27.14■■□□□ 1.94
C6orf48-203ENST00000375638 ABCC1P33527 1531 aa27.14■■□□□ 1.94
C6orf48-203ENST00000375638 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
C6orf48-203ENST00000375638 PLEKHH2Q8IVE3 1493 aa27.13■■□□□ 1.93
C6orf48-203ENST00000375638 ARHGEF12Q9NZN5 1544 aa27.13■■□□□ 1.93
C6orf48-203ENST00000375638 HNRNPMP52272 730 aaKnown RBP eCLIP27.13■■□□□ 1.93
C6orf48-203ENST00000375638 SAMD9LQ8IVG5 1584 aa27.13■■□□□ 1.93
C6orf48-203ENST00000375638 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
C6orf48-203ENST00000375638 KIAA1107Q9UPP5 1409 aa27.12■■□□□ 1.93
C6orf48-203ENST00000375638 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
C6orf48-203ENST00000375638 ZMYM4Q5VZL5 1548 aa27.1■■□□□ 1.93
C6orf48-203ENST00000375638 MAGI2Q86UL8 1455 aa27.09■■□□□ 1.93
C6orf48-203ENST00000375638 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
C6orf48-203ENST00000375638 MYT1LQ9UL68 1186 aa27.08■■□□□ 1.93
C6orf48-203ENST00000375638 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
C6orf48-203ENST00000375638 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
C6orf48-203ENST00000375638 KDM5CP41229 1560 aa27.04■■□□□ 1.92
C6orf48-203ENST00000375638 ZFYVE16Q7Z3T8 1539 aa27.03■■□□□ 1.92
C6orf48-203ENST00000375638 YEATS2Q9ULM3 1422 aa27.03■■□□□ 1.92
C6orf48-203ENST00000375638 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
C6orf48-203ENST00000375638 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
C6orf48-203ENST00000375638 SPAG9O60271 1321 aaKnown RBP27■■□□□ 1.91
C6orf48-203ENST00000375638 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
C6orf48-203ENST00000375638 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
C6orf48-203ENST00000375638 MBD5Q9P267 1494 aa27■■□□□ 1.91
C6orf48-203ENST00000375638 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
C6orf48-203ENST00000375638 ARID4BQ4LE39 1312 aaPredicted RBP26.96■■□□□ 1.91
C6orf48-203ENST00000375638 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
C6orf48-203ENST00000375638 ATP10AO60312 1499 aa26.95■■□□□ 1.91
C6orf48-203ENST00000375638 FGD6Q6ZV73 1430 aa26.94■■□□□ 1.9
C6orf48-203ENST00000375638 KDM4FA0A1W2PPD8 638 aa26.93■■□□□ 1.9
C6orf48-203ENST00000375638 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
C6orf48-203ENST00000375638 TSPY4P0CV99 314 aa26.9■■□□□ 1.9
C6orf48-203ENST00000375638 TSPY10P0CW01 314 aa26.9■■□□□ 1.9
C6orf48-203ENST00000375638 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
C6orf48-203ENST00000375638 ARHGEF5Q12774 1597 aa26.87■■□□□ 1.89
C6orf48-203ENST00000375638 PTPN23Q9H3S7 1636 aa26.87■■□□□ 1.89
C6orf48-203ENST00000375638 ATP7AQ04656 1500 aa26.86■■□□□ 1.89
C6orf48-203ENST00000375638 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
C6orf48-203ENST00000375638 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
C6orf48-203ENST00000375638 RTEL1-TNFRSF6BF6WH68 1400 aa26.85■■□□□ 1.89
C6orf48-203ENST00000375638 ABCA6Q8N139 1617 aa26.84■■□□□ 1.89
C6orf48-203ENST00000375638 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
C6orf48-203ENST00000375638 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
C6orf48-203ENST00000375638 INO80Q9ULG1 1556 aaPredicted RBP26.83■■□□□ 1.89
C6orf48-203ENST00000375638 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
C6orf48-203ENST00000375638 MLECQ14165 292 aa26.79■■□□□ 1.88
C6orf48-203ENST00000375638 REREQ9P2R6 1566 aa26.79■■□□□ 1.88
C6orf48-203ENST00000375638 ABCC5O15440 1437 aa26.76■■□□□ 1.87
C6orf48-203ENST00000375638 SIGLEC1Q9BZZ2 1709 aa26.76■■□□□ 1.87
C6orf48-203ENST00000375638 A2MP01023 1474 aa26.75■■□□□ 1.87
C6orf48-203ENST00000375638 DAPK1P53355 1430 aa26.74■■□□□ 1.87
C6orf48-203ENST00000375638 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
C6orf48-203ENST00000375638 AGLP35573 1532 aa26.73■■□□□ 1.87
C6orf48-203ENST00000375638 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
C6orf48-203ENST00000375638 MAST1Q9Y2H9 1570 aa26.71■■□□□ 1.87
C6orf48-203ENST00000375638 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
C6orf48-203ENST00000375638 ADAMTSL3P82987 1691 aa26.7■■□□□ 1.86
C6orf48-203ENST00000375638 DNMT1P26358 1616 aaKnown RBP26.69■■□□□ 1.86
C6orf48-203ENST00000375638 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
C6orf48-203ENST00000375638 ADGBQ8N7X0 1667 aa26.68■■□□□ 1.86
C6orf48-203ENST00000375638 PLXNC1O60486 1568 aa26.67■■□□□ 1.86
C6orf48-203ENST00000375638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.65■■□□□ 1.864e-7■□□□□ 10.4
C6orf48-203ENST00000375638 RRP7BPQ9NSQ0 103 aa26.64■■□□□ 1.86
C6orf48-203ENST00000375638 MADDQ8WXG6 1647 aa26.63■■□□□ 1.85
C6orf48-203ENST00000375638 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
C6orf48-203ENST00000375638 ANKRD30AQ9BXX3 1397 aa26.62■■□□□ 1.85
C6orf48-203ENST00000375638 KIF3BO15066 747 aa26.62■■□□□ 1.85
C6orf48-203ENST00000375638 ESF1Q9H501 851 aaKnown RBP26.62■■□□□ 1.85
C6orf48-203ENST00000375638 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
C6orf48-203ENST00000375638 KIF15Q9NS87 1388 aa26.61■■□□□ 1.85
C6orf48-203ENST00000375638 GGT6Q6P531 493 aa26.61■■□□□ 1.85
C6orf48-203ENST00000375638 ITGAEP38570 1179 aa26.6■■□□□ 1.85
C6orf48-203ENST00000375638 PTPRMP28827 1452 aa26.6■■□□□ 1.85
C6orf48-203ENST00000375638 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
C6orf48-203ENST00000375638 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
C6orf48-203ENST00000375638 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
C6orf48-203ENST00000375638 PPP6R1Q9UPN7 881 aa26.55■■□□□ 1.84
C6orf48-203ENST00000375638 RIMS1Q86UR5 1692 aaKnown RBP26.54■■□□□ 1.84
C6orf48-203ENST00000375638 ADGRL2O95490 1459 aa26.54■■□□□ 1.84
C6orf48-203ENST00000375638 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
C6orf48-203ENST00000375638 PLPPR3Q6T4P5 718 aa26.53■■□□□ 1.84
C6orf48-203ENST00000375638 CNTLNQ9NXG0 1405 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms