RNA–Protein interactions for RNA: ENST00000375540.5

ECM2-202, Transcript of extracellular matrix protein 2, humanhuman

TSL 2 BASIC

Gene ECM2, Length 1,606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-202ENST00000375540 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
ECM2-202ENST00000375540 SLAIN1Q8ND83 568 aa10.18□□□□□ -0.78
ECM2-202ENST00000375540 PLCB2Q00722 1185 aa10.15□□□□□ -0.78
ECM2-202ENST00000375540 TMEM92Q6UXU6 159 aa10.13□□□□□ -0.79
ECM2-202ENST00000375540 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
ECM2-202ENST00000375540 TMC2Q8TDI7 906 aa10.11□□□□□ -0.79
ECM2-202ENST00000375540 KIF3CO14782 793 aa10.1□□□□□ -0.79
ECM2-202ENST00000375540 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
ECM2-202ENST00000375540 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
ECM2-202ENST00000375540 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
ECM2-202ENST00000375540 PDE4AP27815 886 aa10.06□□□□□ -0.8
ECM2-202ENST00000375540 CADPS2Q86UW7 1296 aa10.06□□□□□ -0.8
ECM2-202ENST00000375540 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
ECM2-202ENST00000375540 SNPHO15079 494 aa10.05□□□□□ -0.8
ECM2-202ENST00000375540 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
ECM2-202ENST00000375540 FOXK1P85037 733 aa10.04□□□□□ -0.8
ECM2-202ENST00000375540 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
ECM2-202ENST00000375540 DSG2Q14126 1118 aa10□□□□□ -0.81
ECM2-202ENST00000375540 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
ECM2-202ENST00000375540 DOK7Q18PE1 504 aa10□□□□□ -0.81
ECM2-202ENST00000375540 MFSD10Q14728 455 aa9.99□□□□□ -0.81
ECM2-202ENST00000375540 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
ECM2-202ENST00000375540 HOXB3P14651 431 aaPredicted RBP9.98□□□□□ -0.81
ECM2-202ENST00000375540 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
ECM2-202ENST00000375540 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
ECM2-202ENST00000375540 RIMBP2O15034 1052 aa9.96□□□□□ -0.81
ECM2-202ENST00000375540 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.81
ECM2-202ENST00000375540 SLC34A2O95436 690 aa9.94□□□□□ -0.82
ECM2-202ENST00000375540 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
ECM2-202ENST00000375540 ZSWIM6Q9HCJ5 1215 aa9.93□□□□□ -0.82
ECM2-202ENST00000375540 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
ECM2-202ENST00000375540 ST18O60284 1047 aa9.91□□□□□ -0.82
ECM2-202ENST00000375540 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
ECM2-202ENST00000375540 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
ECM2-202ENST00000375540 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
ECM2-202ENST00000375540 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
ECM2-202ENST00000375540 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
ECM2-202ENST00000375540 OXER1Q8TDS5 423 aa9.85□□□□□ -0.83
ECM2-202ENST00000375540 PCDHGA4Q9Y5G9 962 aa9.85□□□□□ -0.83
ECM2-202ENST00000375540 TBC1D12O60347 775 aa9.85□□□□□ -0.83
ECM2-202ENST00000375540 E2F4Q16254 413 aa9.85□□□□□ -0.83
ECM2-202ENST00000375540 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
ECM2-202ENST00000375540 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
ECM2-202ENST00000375540 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
ECM2-202ENST00000375540 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
ECM2-202ENST00000375540 EMP3P54852 163 aa9.8□□□□□ -0.84
ECM2-202ENST00000375540 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
ECM2-202ENST00000375540 KDM2AQ9Y2K7 1162 aa9.8□□□□□ -0.84
ECM2-202ENST00000375540 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
ECM2-202ENST00000375540 NUDT7P0C024 238 aa9.78□□□□□ -0.84
ECM2-202ENST00000375540 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
ECM2-202ENST00000375540 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
ECM2-202ENST00000375540 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
ECM2-202ENST00000375540 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
ECM2-202ENST00000375540 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
ECM2-202ENST00000375540 DPYSL4O14531 572 aa9.76□□□□□ -0.85
ECM2-202ENST00000375540 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
ECM2-202ENST00000375540 ERBB3P21860 1342 aa9.74□□□□□ -0.85
ECM2-202ENST00000375540 EVI5O60447 810 aa9.74□□□□□ -0.85
ECM2-202ENST00000375540 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
ECM2-202ENST00000375540 FAM205CA6NFA0 338 aa9.72□□□□□ -0.85
ECM2-202ENST00000375540 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.85
ECM2-202ENST00000375540 SLC24A1O60721 1099 aa9.71□□□□□ -0.85
ECM2-202ENST00000375540 PDIA6Q15084 440 aa9.71□□□□□ -0.85
ECM2-202ENST00000375540 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.85
ECM2-202ENST00000375540 LHX6Q9UPM6 363 aa9.71□□□□□ -0.85
ECM2-202ENST00000375540 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
ECM2-202ENST00000375540 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
ECM2-202ENST00000375540 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
ECM2-202ENST00000375540 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
ECM2-202ENST00000375540 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
ECM2-202ENST00000375540 JPH4Q96JJ6 628 aa9.66□□□□□ -0.86
ECM2-202ENST00000375540 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
ECM2-202ENST00000375540 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
ECM2-202ENST00000375540 PTGER2P43116 358 aa9.64□□□□□ -0.87
ECM2-202ENST00000375540 PPP4R3BQ5MIZ7 849 aa9.64□□□□□ -0.87
ECM2-202ENST00000375540 FOSBP53539 338 aa9.64□□□□□ -0.87
ECM2-202ENST00000375540 ZNF454Q8N9F8 522 aa9.64□□□□□ -0.87
ECM2-202ENST00000375540 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
ECM2-202ENST00000375540 PHF14O94880 888 aa9.61□□□□□ -0.87
ECM2-202ENST00000375540 DDX12PQ92771 950 aa9.6□□□□□ -0.87
ECM2-202ENST00000375540 PCDHGA10Q9Y5H3 936 aa9.6□□□□□ -0.87
ECM2-202ENST00000375540 NISCHQ9Y2I1 1504 aa9.59□□□□□ -0.87
ECM2-202ENST00000375540 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
ECM2-202ENST00000375540 ZDHHC16Q969W1 377 aa9.59□□□□□ -0.87
ECM2-202ENST00000375540 EPAS1Q99814 870 aa9.59□□□□□ -0.87
ECM2-202ENST00000375540 PBX2P40425 430 aa9.58□□□□□ -0.88
ECM2-202ENST00000375540 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
ECM2-202ENST00000375540 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
ECM2-202ENST00000375540 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
ECM2-202ENST00000375540 NBR1Q14596 966 aa9.56□□□□□ -0.88
ECM2-202ENST00000375540 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
ECM2-202ENST00000375540 SEMA3EO15041 775 aa9.55□□□□□ -0.88
ECM2-202ENST00000375540 ADAM33Q9BZ11 813 aa9.54□□□□□ -0.88
ECM2-202ENST00000375540 ARHGAP33O14559 1287 aa9.53□□□□□ -0.88
ECM2-202ENST00000375540 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
ECM2-202ENST00000375540 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
ECM2-202ENST00000375540 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
ECM2-202ENST00000375540 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
ECM2-202ENST00000375540 PTPREP23469 700 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms