RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 DENND4BO75064 1496 aaPredicted RBP36.1■■■■□ 3.37
SUSD3-202ENST00000375472 LRRC9Q6ZRR7 1453 aa36.09■■■■□ 3.37
SUSD3-202ENST00000375472 CDC42BPBQ9Y5S2 1711 aa36.08■■■■□ 3.37
SUSD3-202ENST00000375472 ADGRL1O94910 1474 aa36.08■■■■□ 3.37
SUSD3-202ENST00000375472 CCNB3Q8WWL7 1395 aa36.08■■■■□ 3.37
SUSD3-202ENST00000375472 CDC42BPAQ5VT25 1732 aa36.07■■■■□ 3.36
SUSD3-202ENST00000375472 GPATCH8Q9UKJ3 1502 aaKnown RBP36.07■■■■□ 3.36
SUSD3-202ENST00000375472 RAPGEF3O95398 923 aa36.05■■■■□ 3.36
SUSD3-202ENST00000375472 SUPT6HQ7KZ85 1726 aaKnown RBP36.05■■■■□ 3.36
SUSD3-202ENST00000375472 SCAPERQ9BY12 1400 aa36.03■■■■□ 3.36
SUSD3-202ENST00000375472 NCOA2Q15596 1464 aa35.99■■■■□ 3.35
SUSD3-202ENST00000375472 CFDP1Q9UEE9 299 aaPredicted RBP35.98■■■■□ 3.35
SUSD3-202ENST00000375472 RICTORQ6R327 1708 aa35.97■■■■□ 3.35
SUSD3-202ENST00000375472 KANK4Q5T7N3 995 aaPredicted RBP35.97■■■■□ 3.35
SUSD3-202ENST00000375472 FRMPD1Q5SYB0 1578 aa35.97■■■■□ 3.35
SUSD3-202ENST00000375472 ITSN2Q9NZM3 1697 aa35.95■■■■□ 3.35
SUSD3-202ENST00000375472 POGZQ7Z3K3 1410 aa35.95■■■■□ 3.35
SUSD3-202ENST00000375472 ABCC1P33527 1531 aa35.91■■■■□ 3.34
SUSD3-202ENST00000375472 ZMYM4Q5VZL5 1548 aa35.9■■■■□ 3.34
SUSD3-202ENST00000375472 ZNF777Q9ULD5 760 aaPredicted RBP35.9■■■■□ 3.34
SUSD3-202ENST00000375472 ZNF518AQ6AHZ1 1483 aa35.9■■■■□ 3.34
SUSD3-202ENST00000375472 PLEKHH2Q8IVE3 1493 aa35.89■■■■□ 3.34
SUSD3-202ENST00000375472 MAGI2Q86UL8 1455 aa35.88■■■■□ 3.33
SUSD3-202ENST00000375472 SAMD9LQ8IVG5 1584 aa35.85■■■■□ 3.33
SUSD3-202ENST00000375472 KIAA1107Q9UPP5 1409 aa35.85■■■■□ 3.33
SUSD3-202ENST00000375472 ARHGEF12Q9NZN5 1544 aa35.81■■■■□ 3.32
SUSD3-202ENST00000375472 AFAP1Q8N556 730 aa35.8■■■■□ 3.32
SUSD3-202ENST00000375472 KDM5CP41229 1560 aa35.8■■■■□ 3.32
SUSD3-202ENST00000375472 ZFYVE16Q7Z3T8 1539 aa35.77■■■■□ 3.32
SUSD3-202ENST00000375472 ARHGEF40Q8TER5 1519 aa35.77■■■■□ 3.32
SUSD3-202ENST00000375472 TRAPPC8Q9Y2L5 1435 aa35.76■■■■□ 3.32
SUSD3-202ENST00000375472 SYCP2Q9BX26 1530 aa35.76■■■■□ 3.31
SUSD3-202ENST00000375472 MYOM3Q5VTT5 1437 aa35.74■■■■□ 3.31
SUSD3-202ENST00000375472 HNRNPMP52272 730 aaKnown RBP eCLIP35.73■■■■□ 3.31
SUSD3-202ENST00000375472 MIA2Q96PC5 1412 aa35.73■■■■□ 3.31
SUSD3-202ENST00000375472 MLH3Q9UHC1 1453 aa35.72■■■■□ 3.31
SUSD3-202ENST00000375472 ZNF644Q9H582 1327 aaPredicted RBP35.7■■■■□ 3.31
SUSD3-202ENST00000375472 HECW2Q9P2P5 1572 aa35.69■■■■□ 3.3
SUSD3-202ENST00000375472 YEATS2Q9ULM3 1422 aa35.69■■■■□ 3.3
SUSD3-202ENST00000375472 RSPH4AQ5TD94 716 aa35.68■■■■□ 3.3
SUSD3-202ENST00000375472 MYT1LQ9UL68 1186 aa35.68■■■■□ 3.3
SUSD3-202ENST00000375472 CAMSAP2Q08AD1 1489 aa35.67■■■■□ 3.3
SUSD3-202ENST00000375472 MBD5Q9P267 1494 aa35.65■■■■□ 3.3
SUSD3-202ENST00000375472 ATP10AO60312 1499 aa35.64■■■■□ 3.3
SUSD3-202ENST00000375472 SPAG9O60271 1321 aaKnown RBP35.62■■■■□ 3.29
SUSD3-202ENST00000375472 C9orf84Q5VXU9 1444 aa35.59■■■■□ 3.29
SUSD3-202ENST00000375472 KDM4FA0A1W2PPD8 638 aa35.59■■■■□ 3.29
SUSD3-202ENST00000375472 ARID4BQ4LE39 1312 aaPredicted RBP35.57■■■■□ 3.28
SUSD3-202ENST00000375472 CCDC141Q6ZP82 1450 aa35.56■■■■□ 3.28
SUSD3-202ENST00000375472 KIDINS220Q9ULH0 1771 aa35.56■■■■□ 3.28
SUSD3-202ENST00000375472 ARHGEF5Q12774 1597 aa35.55■■■■□ 3.28
SUSD3-202ENST00000375472 DIP2CQ9Y2E4 1556 aa35.54■■■■□ 3.28
SUSD3-202ENST00000375472 REREQ9P2R6 1566 aa35.52■■■■□ 3.28
SUSD3-202ENST00000375472 RTEL1-TNFRSF6BF6WH68 1400 aa35.52■■■■□ 3.28
SUSD3-202ENST00000375472 FGD6Q6ZV73 1430 aa35.52■■■■□ 3.28
SUSD3-202ENST00000375472 ATP7AQ04656 1500 aa35.52■■■■□ 3.28
SUSD3-202ENST00000375472 ABCA6Q8N139 1617 aa35.51■■■■□ 3.28
SUSD3-202ENST00000375472 INO80Q9ULG1 1556 aaPredicted RBP35.51■■■■□ 3.27
SUSD3-202ENST00000375472 TSPY4P0CV99 314 aa35.49■■■■□ 3.27
SUSD3-202ENST00000375472 TSPY10P0CW01 314 aa35.49■■■■□ 3.27
SUSD3-202ENST00000375472 PTPN23Q9H3S7 1636 aa35.49■■■■□ 3.27
SUSD3-202ENST00000375472 TCOF1Q13428 1488 aaKnown RBP35.46■■■■□ 3.27
SUSD3-202ENST00000375472 BCORL1Q5H9F3 1711 aa35.44■■■■□ 3.26
SUSD3-202ENST00000375472 AGLP35573 1532 aa35.4■■■■□ 3.26
SUSD3-202ENST00000375472 SIGLEC1Q9BZZ2 1709 aa35.4■■■■□ 3.26
SUSD3-202ENST00000375472 ADAMTSL3P82987 1691 aa35.4■■■■□ 3.26
SUSD3-202ENST00000375472 MAST1Q9Y2H9 1570 aa35.36■■■■□ 3.25
SUSD3-202ENST00000375472 A2MP01023 1474 aa35.35■■■■□ 3.25
SUSD3-202ENST00000375472 PPARGC1BQ86YN6 1023 aaKnown RBP35.35■■■■□ 3.25
SUSD3-202ENST00000375472 ADGBQ8N7X0 1667 aa35.35■■■■□ 3.25
SUSD3-202ENST00000375472 SHANK2Q9UPX8 1470 aa35.3■■■■□ 3.24
SUSD3-202ENST00000375472 MLECQ14165 292 aa35.3■■■■□ 3.24
SUSD3-202ENST00000375472 ABCC5O15440 1437 aa35.3■■■■□ 3.24
SUSD3-202ENST00000375472 PLXNC1O60486 1568 aa35.3■■■■□ 3.24
SUSD3-202ENST00000375472 DNMT1P26358 1616 aaKnown RBP35.29■■■■□ 3.24
SUSD3-202ENST00000375472 DHX29Q7Z478 1369 aaKnown RBP35.28■■■■□ 3.24
SUSD3-202ENST00000375472 FAM50AQ14320 339 aaKnown RBP35.28■■■■□ 3.24
SUSD3-202ENST00000375472 DAPK1P53355 1430 aa35.28■■■■□ 3.24
SUSD3-202ENST00000375472 MADDQ8WXG6 1647 aa35.26■■■■□ 3.24
SUSD3-202ENST00000375472 CROCC2H7BZ55 1655 aa35.24■■■■□ 3.23
SUSD3-202ENST00000375472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.21■■■■□ 3.23
SUSD3-202ENST00000375472 PTPRMP28827 1452 aa35.2■■■■□ 3.23
SUSD3-202ENST00000375472 FER1L4A9Z1Z3 1794 aa35.18■■■■□ 3.22
SUSD3-202ENST00000375472 RIMS1Q86UR5 1692 aaKnown RBP35.16■■■■□ 3.22
SUSD3-202ENST00000375472 ESF1Q9H501 851 aaKnown RBP35.15■■■■□ 3.22
SUSD3-202ENST00000375472 PPP6R1Q9UPN7 881 aa35.15■■■■□ 3.22
SUSD3-202ENST00000375472 ANKRD30AQ9BXX3 1397 aa35.13■■■■□ 3.21
SUSD3-202ENST00000375472 DUOX2Q9NRD8 1548 aa35.11■■■■□ 3.21
SUSD3-202ENST00000375472 RRBP1Q9P2E9 1410 aaKnown RBP35.11■■■■□ 3.21
SUSD3-202ENST00000375472 CNTLNQ9NXG0 1405 aa35.1■■■■□ 3.21
SUSD3-202ENST00000375472 KIF15Q9NS87 1388 aa35.1■■■■□ 3.21
SUSD3-202ENST00000375472 KIF3BO15066 747 aa35.09■■■■□ 3.21
SUSD3-202ENST00000375472 GGT6Q6P531 493 aa35.08■■■■□ 3.21
SUSD3-202ENST00000375472 CHIC2Q9UKJ5 165 aa35.08■■■■□ 3.21
SUSD3-202ENST00000375472 ADGRL2O95490 1459 aa35.08■■■■□ 3.21
SUSD3-202ENST00000375472 RRP7BPQ9NSQ0 103 aa35.06■■■■□ 3.2
SUSD3-202ENST00000375472 NCOA1Q15788 1441 aa35.06■■■■□ 3.2
SUSD3-202ENST00000375472 EIF2AK4Q9P2K8 1649 aaKnown RBP35.04■■■■□ 3.2
SUSD3-202ENST00000375472 ERBINQ96RT1 1412 aa35.03■■■■□ 3.2
SUSD3-202ENST00000375472 FAM135AQ9P2D6 1515 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms