RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
PFDN6-202ENST00000374607 NEO1Q92859 1461 aa23.62■■□□□ 1.37
PFDN6-202ENST00000374607 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
PFDN6-202ENST00000374607 AKNAQ7Z591 1439 aa23.59■■□□□ 1.37
PFDN6-202ENST00000374607 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
PFDN6-202ENST00000374607 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
PFDN6-202ENST00000374607 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
PFDN6-202ENST00000374607 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
PFDN6-202ENST00000374607 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.36
PFDN6-202ENST00000374607 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
PFDN6-202ENST00000374607 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
PFDN6-202ENST00000374607 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
PFDN6-202ENST00000374607 ADGRL1O94910 1474 aa23.54■■□□□ 1.36
PFDN6-202ENST00000374607 SCAPERQ9BY12 1400 aa23.51■■□□□ 1.35
PFDN6-202ENST00000374607 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
PFDN6-202ENST00000374607 RAPGEF3O95398 923 aa23.5■■□□□ 1.35
PFDN6-202ENST00000374607 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
PFDN6-202ENST00000374607 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
PFDN6-202ENST00000374607 PLEKHH2Q8IVE3 1493 aa23.45■■□□□ 1.34
PFDN6-202ENST00000374607 SAMD9LQ8IVG5 1584 aa23.44■■□□□ 1.34
PFDN6-202ENST00000374607 ZNF644Q9H582 1327 aaPredicted RBP23.43■■□□□ 1.34
PFDN6-202ENST00000374607 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.34
PFDN6-202ENST00000374607 ABCC1P33527 1531 aa23.42■■□□□ 1.34
PFDN6-202ENST00000374607 MIA2Q96PC5 1412 aa23.42■■□□□ 1.34
PFDN6-202ENST00000374607 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
PFDN6-202ENST00000374607 SYCP2Q9BX26 1530 aa23.39■■□□□ 1.34
PFDN6-202ENST00000374607 CAMSAP2Q08AD1 1489 aa23.39■■□□□ 1.34
PFDN6-202ENST00000374607 ZNF518AQ6AHZ1 1483 aa23.39■■□□□ 1.34
PFDN6-202ENST00000374607 AFAP1Q8N556 730 aa23.39■■□□□ 1.33
PFDN6-202ENST00000374607 KIAA1107Q9UPP5 1409 aa23.38■■□□□ 1.33
PFDN6-202ENST00000374607 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
PFDN6-202ENST00000374607 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
PFDN6-202ENST00000374607 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
PFDN6-202ENST00000374607 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
PFDN6-202ENST00000374607 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
PFDN6-202ENST00000374607 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
PFDN6-202ENST00000374607 FRMPD1Q5SYB0 1578 aa23.34■■□□□ 1.33
PFDN6-202ENST00000374607 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.33
PFDN6-202ENST00000374607 TSPY4P0CV99 314 aa23.32■■□□□ 1.32
PFDN6-202ENST00000374607 TSPY10P0CW01 314 aa23.32■■□□□ 1.32
PFDN6-202ENST00000374607 SPAG9O60271 1321 aaKnown RBP23.32■■□□□ 1.32
PFDN6-202ENST00000374607 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
PFDN6-202ENST00000374607 MAGI2Q86UL8 1455 aa23.29■■□□□ 1.32
PFDN6-202ENST00000374607 ZMYM4Q5VZL5 1548 aa23.28■■□□□ 1.32
PFDN6-202ENST00000374607 CCDC141Q6ZP82 1450 aa23.28■■□□□ 1.32
PFDN6-202ENST00000374607 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
PFDN6-202ENST00000374607 KDM5CP41229 1560 aa23.27■■□□□ 1.32
PFDN6-202ENST00000374607 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.32
PFDN6-202ENST00000374607 MBD5Q9P267 1494 aa23.26■■□□□ 1.31
PFDN6-202ENST00000374607 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
PFDN6-202ENST00000374607 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
PFDN6-202ENST00000374607 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
PFDN6-202ENST00000374607 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
PFDN6-202ENST00000374607 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
PFDN6-202ENST00000374607 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
PFDN6-202ENST00000374607 ATP7AQ04656 1500 aa23.19■■□□□ 1.3
PFDN6-202ENST00000374607 ITGAEP38570 1179 aa23.19■■□□□ 1.3
PFDN6-202ENST00000374607 ATP10AO60312 1499 aa23.18■■□□□ 1.3
PFDN6-202ENST00000374607 DAPK1P53355 1430 aa23.17■■□□□ 1.3
PFDN6-202ENST00000374607 RTEL1-TNFRSF6BF6WH68 1400 aa23.16■■□□□ 1.3
PFDN6-202ENST00000374607 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
PFDN6-202ENST00000374607 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
PFDN6-202ENST00000374607 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
PFDN6-202ENST00000374607 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
PFDN6-202ENST00000374607 ABCC5O15440 1437 aa23.15■■□□□ 1.3
PFDN6-202ENST00000374607 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
PFDN6-202ENST00000374607 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
PFDN6-202ENST00000374607 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
PFDN6-202ENST00000374607 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
PFDN6-202ENST00000374607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
PFDN6-202ENST00000374607 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
PFDN6-202ENST00000374607 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
PFDN6-202ENST00000374607 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
PFDN6-202ENST00000374607 MLECQ14165 292 aa23.09■■□□□ 1.29
PFDN6-202ENST00000374607 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
PFDN6-202ENST00000374607 ANKRD30AQ9BXX3 1397 aa23.08■■□□□ 1.29
PFDN6-202ENST00000374607 A2MP01023 1474 aa23.08■■□□□ 1.29
PFDN6-202ENST00000374607 ADGBQ8N7X0 1667 aa23.08■■□□□ 1.29
PFDN6-202ENST00000374607 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
PFDN6-202ENST00000374607 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
PFDN6-202ENST00000374607 ESF1Q9H501 851 aaKnown RBP23.03■■□□□ 1.28
PFDN6-202ENST00000374607 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
PFDN6-202ENST00000374607 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
PFDN6-202ENST00000374607 KIF3BO15066 747 aa23■■□□□ 1.27
PFDN6-202ENST00000374607 GGT6Q6P531 493 aa22.99■■□□□ 1.27
PFDN6-202ENST00000374607 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
PFDN6-202ENST00000374607 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
PFDN6-202ENST00000374607 AGLP35573 1532 aa22.98■■□□□ 1.27
PFDN6-202ENST00000374607 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
PFDN6-202ENST00000374607 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
PFDN6-202ENST00000374607 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
PFDN6-202ENST00000374607 SIGLEC1Q9BZZ2 1709 aa22.96■■□□□ 1.27
PFDN6-202ENST00000374607 ROCK1Q13464 1354 aa22.94■■□□□ 1.26
PFDN6-202ENST00000374607 ADAMTSL3P82987 1691 aa22.92■■□□□ 1.26
PFDN6-202ENST00000374607 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
PFDN6-202ENST00000374607 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
PFDN6-202ENST00000374607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.252e-9■□□□□ 9.3
PFDN6-202ENST00000374607 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
PFDN6-202ENST00000374607 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
PFDN6-202ENST00000374607 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms