RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
PFDN6-201ENST00000374606 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
PFDN6-201ENST00000374606 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
PFDN6-201ENST00000374606 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
PFDN6-201ENST00000374606 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
PFDN6-201ENST00000374606 PLEKHD1A6NEE1 506 aa27.19■■□□□ 1.94
PFDN6-201ENST00000374606 FANCAO15360 1455 aa27.19■■□□□ 1.94
PFDN6-201ENST00000374606 POGZQ7Z3K3 1410 aa27.17■■□□□ 1.94
PFDN6-201ENST00000374606 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
PFDN6-201ENST00000374606 ZMYM4Q5VZL5 1548 aa27.16■■□□□ 1.94
PFDN6-201ENST00000374606 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
PFDN6-201ENST00000374606 PPARGC1BQ86YN6 1023 aaKnown RBP27.15■■□□□ 1.94
PFDN6-201ENST00000374606 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
PFDN6-201ENST00000374606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.945e-21■□□□□ 10
PFDN6-201ENST00000374606 ZFYVE16Q7Z3T8 1539 aa27.13■■□□□ 1.93
PFDN6-201ENST00000374606 TTC37Q6PGP7 1564 aa27.12■■□□□ 1.93
PFDN6-201ENST00000374606 TROQ12816 1431 aaPredicted RBP27.1■■□□□ 1.93
PFDN6-201ENST00000374606 HSPA2P54652 639 aa27.1■■□□□ 1.93
PFDN6-201ENST00000374606 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
PFDN6-201ENST00000374606 MAGI2Q86UL8 1455 aa27.09■■□□□ 1.93
PFDN6-201ENST00000374606 YEATS2Q9ULM3 1422 aa27.08■■□□□ 1.93
PFDN6-201ENST00000374606 PLPPR3Q6T4P5 718 aa27.08■■□□□ 1.93
PFDN6-201ENST00000374606 SIGLEC1Q9BZZ2 1709 aa27.07■■□□□ 1.92
PFDN6-201ENST00000374606 KIF14Q15058 1648 aa27.05■■□□□ 1.92
PFDN6-201ENST00000374606 FER1L4A9Z1Z3 1794 aa27.03■■□□□ 1.92
PFDN6-201ENST00000374606 NCOA2Q15596 1464 aa27■■□□□ 1.91
PFDN6-201ENST00000374606 MLECQ14165 292 aa26.99■■□□□ 1.91
PFDN6-201ENST00000374606 SCAPERQ9BY12 1400 aa26.99■■□□□ 1.91
PFDN6-201ENST00000374606 PLCH2O75038 1416 aa26.97■■□□□ 1.91
PFDN6-201ENST00000374606 CERKQ8TCT0 537 aa26.96■■□□□ 1.91
PFDN6-201ENST00000374606 ARHGEF12Q9NZN5 1544 aa26.93■■□□□ 1.9
PFDN6-201ENST00000374606 ATP10AO60312 1499 aa26.93■■□□□ 1.9
PFDN6-201ENST00000374606 C9orf84Q5VXU9 1444 aa26.92■■□□□ 1.9
PFDN6-201ENST00000374606 PREX1Q8TCU6 1659 aa26.9■■□□□ 1.9
PFDN6-201ENST00000374606 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.9
PFDN6-201ENST00000374606 MYO5CQ9NQX4 1742 aa26.89■■□□□ 1.9
PFDN6-201ENST00000374606 EFCAB2Q5VUJ9 269 aa26.87■■□□□ 1.89
PFDN6-201ENST00000374606 MYOM3Q5VTT5 1437 aa26.86■■□□□ 1.89
PFDN6-201ENST00000374606 CCNB3Q8WWL7 1395 aa26.85■■□□□ 1.89
PFDN6-201ENST00000374606 CDC42BPAQ5VT25 1732 aa26.84■■□□□ 1.89
PFDN6-201ENST00000374606 ZNF518AQ6AHZ1 1483 aa26.81■■□□□ 1.88
PFDN6-201ENST00000374606 PREX2Q70Z35 1606 aa26.81■■□□□ 1.88
PFDN6-201ENST00000374606 CEBPAP49715 358 aaPredicted RBP26.79■■□□□ 1.88
PFDN6-201ENST00000374606 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
PFDN6-201ENST00000374606 GPATCH8Q9UKJ3 1502 aaKnown RBP26.79■■□□□ 1.88
PFDN6-201ENST00000374606 RRBP1Q9P2E9 1410 aaKnown RBP26.78■■□□□ 1.88
PFDN6-201ENST00000374606 KDM5CP41229 1560 aa26.78■■□□□ 1.88
PFDN6-201ENST00000374606 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
PFDN6-201ENST00000374606 ARHGAP5Q13017 1502 aa26.76■■□□□ 1.87
PFDN6-201ENST00000374606 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
PFDN6-201ENST00000374606 MIA2Q96PC5 1412 aa26.75■■□□□ 1.87
PFDN6-201ENST00000374606 STRCQ7RTU9 1775 aa26.74■■□□□ 1.87
PFDN6-201ENST00000374606 CDC42BPBQ9Y5S2 1711 aa26.74■■□□□ 1.87
PFDN6-201ENST00000374606 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
PFDN6-201ENST00000374606 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
PFDN6-201ENST00000374606 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
PFDN6-201ENST00000374606 DIP2CQ9Y2E4 1556 aa26.72■■□□□ 1.87
PFDN6-201ENST00000374606 REREQ9P2R6 1566 aa26.71■■□□□ 1.87
PFDN6-201ENST00000374606 AFAP1Q8N556 730 aa26.71■■□□□ 1.87
PFDN6-201ENST00000374606 MYT1LQ9UL68 1186 aa26.71■■□□□ 1.87
PFDN6-201ENST00000374606 TCOF1Q13428 1488 aaKnown RBP26.68■■□□□ 1.86
PFDN6-201ENST00000374606 CFDP1Q9UEE9 299 aaPredicted RBP26.68■■□□□ 1.86
PFDN6-201ENST00000374606 ABCA6Q8N139 1617 aa26.66■■□□□ 1.86
PFDN6-201ENST00000374606 DISP3Q9P2K9 1392 aa26.66■■□□□ 1.86
PFDN6-201ENST00000374606 CAMSAP2Q08AD1 1489 aa26.65■■□□□ 1.86
PFDN6-201ENST00000374606 MLH3Q9UHC1 1453 aa26.65■■□□□ 1.86
PFDN6-201ENST00000374606 C3P01024 1663 aa26.64■■□□□ 1.86
PFDN6-201ENST00000374606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.85
PFDN6-201ENST00000374606 PTPRTO14522 1441 aa26.63■■□□□ 1.85
PFDN6-201ENST00000374606 AGLP35573 1532 aa26.62■■□□□ 1.85
PFDN6-201ENST00000374606 FAM50AQ14320 339 aaKnown RBP26.62■■□□□ 1.85
PFDN6-201ENST00000374606 SAMD9LQ8IVG5 1584 aa26.62■■□□□ 1.85
PFDN6-201ENST00000374606 ESF1Q9H501 851 aaKnown RBP26.6■■□□□ 1.85
PFDN6-201ENST00000374606 ABCC1P33527 1531 aa26.6■■□□□ 1.85
PFDN6-201ENST00000374606 ZNF777Q9ULD5 760 aaPredicted RBP26.59■■□□□ 1.85
PFDN6-201ENST00000374606 TRAPPC8Q9Y2L5 1435 aa26.57■■□□□ 1.84
PFDN6-201ENST00000374606 ILDR2Q71H61 639 aa26.57■■□□□ 1.84
PFDN6-201ENST00000374606 PLEKHH2Q8IVE3 1493 aa26.56■■□□□ 1.84
PFDN6-201ENST00000374606 ZNF644Q9H582 1327 aaPredicted RBP26.55■■□□□ 1.84
PFDN6-201ENST00000374606 CNTLNQ9NXG0 1405 aa26.54■■□□□ 1.84
PFDN6-201ENST00000374606 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
PFDN6-201ENST00000374606 SOCS7O14512 581 aa26.53■■□□□ 1.84
PFDN6-201ENST00000374606 SPATA31D1Q6ZQQ2 1576 aa26.52■■□□□ 1.84
PFDN6-201ENST00000374606 SYCP2Q9BX26 1530 aa26.52■■□□□ 1.84
PFDN6-201ENST00000374606 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
PFDN6-201ENST00000374606 KIDINS220Q9ULH0 1771 aa26.51■■□□□ 1.83
PFDN6-201ENST00000374606 LTBP4Q8N2S1 1624 aa26.51■■□□□ 1.83
PFDN6-201ENST00000374606 NCOA1Q15788 1441 aa26.5■■□□□ 1.83
PFDN6-201ENST00000374606 CROCC2H7BZ55 1655 aa26.5■■□□□ 1.83
PFDN6-201ENST00000374606 ARHGEF5Q12774 1597 aa26.5■■□□□ 1.83
PFDN6-201ENST00000374606 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
PFDN6-201ENST00000374606 KIAA1107Q9UPP5 1409 aa26.48■■□□□ 1.83
PFDN6-201ENST00000374606 DAPK1P53355 1430 aa26.47■■□□□ 1.83
PFDN6-201ENST00000374606 MROH2AA6NES4 1674 aa26.45■■□□□ 1.82
PFDN6-201ENST00000374606 ITGAEP38570 1179 aa26.45■■□□□ 1.82
PFDN6-201ENST00000374606 NPATQ14207 1427 aa26.45■■□□□ 1.82
PFDN6-201ENST00000374606 CCDC141Q6ZP82 1450 aa26.44■■□□□ 1.82
PFDN6-201ENST00000374606 MBD5Q9P267 1494 aa26.44■■□□□ 1.82
PFDN6-201ENST00000374606 ABCC5O15440 1437 aa26.42■■□□□ 1.82
PFDN6-201ENST00000374606 CAMSAP1Q5T5Y3 1602 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms