RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
PTBP3-205ENST00000374257 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTBP3-205ENST00000374257 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
PTBP3-205ENST00000374257 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
PTBP3-205ENST00000374257 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
PTBP3-205ENST00000374257 SETD5Q9C0A6 1442 aa11.19□□□□□ -0.62
PTBP3-205ENST00000374257 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
PTBP3-205ENST00000374257 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
PTBP3-205ENST00000374257 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
PTBP3-205ENST00000374257 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
PTBP3-205ENST00000374257 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
PTBP3-205ENST00000374257 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
PTBP3-205ENST00000374257 TMF1P82094 1093 aa11.16□□□□□ -0.62
PTBP3-205ENST00000374257 HDGFL2Q7Z4V5 671 aaPredicted RBP11.16□□□□□ -0.62
PTBP3-205ENST00000374257 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
PTBP3-205ENST00000374257 CASKIN1Q8WXD9 1431 aa11.15□□□□□ -0.62
PTBP3-205ENST00000374257 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
PTBP3-205ENST00000374257 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
PTBP3-205ENST00000374257 SOX12O15370 315 aa11.15□□□□□ -0.63
PTBP3-205ENST00000374257 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.63
PTBP3-205ENST00000374257 PRDM2Q13029 1718 aa11.15□□□□□ -0.63
PTBP3-205ENST00000374257 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 FOXD1Q16676 465 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
PTBP3-205ENST00000374257 ZNF644Q9H582 1327 aaPredicted RBP11.13□□□□□ -0.63
PTBP3-205ENST00000374257 KIF15Q9NS87 1388 aa11.13□□□□□ -0.63
PTBP3-205ENST00000374257 TROQ12816 1431 aaPredicted RBP11.13□□□□□ -0.63
PTBP3-205ENST00000374257 ARXQ96QS3 562 aa11.12□□□□□ -0.63
PTBP3-205ENST00000374257 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
PTBP3-205ENST00000374257 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
PTBP3-205ENST00000374257 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
PTBP3-205ENST00000374257 ATF3P18847 181 aa11.11□□□□□ -0.63
PTBP3-205ENST00000374257 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
PTBP3-205ENST00000374257 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
PTBP3-205ENST00000374257 MEX3CQ5U5Q3 659 aaKnown RBP11.1□□□□□ -0.63
PTBP3-205ENST00000374257 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
PTBP3-205ENST00000374257 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
PTBP3-205ENST00000374257 HIRIP3Q9BW71 556 aaPredicted RBP11.1□□□□□ -0.63
PTBP3-205ENST00000374257 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
PTBP3-205ENST00000374257 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
PTBP3-205ENST00000374257 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
PTBP3-205ENST00000374257 ANKLE2Q86XL3 938 aa11.09□□□□□ -0.63
PTBP3-205ENST00000374257 NUTM2FA1L443 756 aa11.08□□□□□ -0.64
PTBP3-205ENST00000374257 PROSER2Q86WR7 435 aaPredicted RBP11.08□□□□□ -0.64
PTBP3-205ENST00000374257 NPHP1O15259 732 aa11.07□□□□□ -0.64
PTBP3-205ENST00000374257 TERF2IPQ9NYB0 399 aa11.07□□□□□ -0.64
PTBP3-205ENST00000374257 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
PTBP3-205ENST00000374257 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
PTBP3-205ENST00000374257 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
PTBP3-205ENST00000374257 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
PTBP3-205ENST00000374257 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
PTBP3-205ENST00000374257 TNNT2P45379 298 aaPredicted RBP11.06□□□□□ -0.64
PTBP3-205ENST00000374257 MRS2Q9HD23 443 aa11.06□□□□□ -0.64
PTBP3-205ENST00000374257 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
PTBP3-205ENST00000374257 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
PTBP3-205ENST00000374257 WDR62O43379 1518 aa11.05□□□□□ -0.64
PTBP3-205ENST00000374257 TEX14Q8IWB6 1497 aa11.05□□□□□ -0.64
PTBP3-205ENST00000374257 SALL2Q9Y467 1007 aaPredicted RBP11.05□□□□□ -0.64
PTBP3-205ENST00000374257 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
PTBP3-205ENST00000374257 ROCK2O75116 1388 aaKnown RBP11.04□□□□□ -0.64
PTBP3-205ENST00000374257 CUL7Q14999 1698 aa11.04□□□□□ -0.64
PTBP3-205ENST00000374257 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
PTBP3-205ENST00000374257 ANKRD50Q9ULJ7 1429 aa11.04□□□□□ -0.64
PTBP3-205ENST00000374257 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
PTBP3-205ENST00000374257 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
PTBP3-205ENST00000374257 MORC1Q86VD1 984 aa11.03□□□□□ -0.64
PTBP3-205ENST00000374257 PHF23Q9BUL5 403 aaPredicted RBP11.02□□□□□ -0.64
PTBP3-205ENST00000374257 DENND4BO75064 1496 aaPredicted RBP11.02□□□□□ -0.64
PTBP3-205ENST00000374257 PNNQ9H307 717 aaKnown RBP11.02□□□□□ -0.64
PTBP3-205ENST00000374257 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
PTBP3-205ENST00000374257 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
PTBP3-205ENST00000374257 KIF21BO75037 1637 aa11.01□□□□□ -0.65
PTBP3-205ENST00000374257 ADGRL1O94910 1474 aa11□□□□□ -0.65
PTBP3-205ENST00000374257 PHLDB1Q86UU1 1377 aa11□□□□□ -0.65
PTBP3-205ENST00000374257 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 PSME1Q06323 249 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 EVA1CP58658 441 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 LRRC9Q6ZRR7 1453 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
PTBP3-205ENST00000374257 PPP6R1Q9UPN7 881 aa10.98□□□□□ -0.65
PTBP3-205ENST00000374257 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
PTBP3-205ENST00000374257 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTBP3-205ENST00000374257 EPRSP07814 1512 aaKnown RBP10.97□□□□□ -0.65
PTBP3-205ENST00000374257 AMPHP49418 695 aa10.97□□□□□ -0.65
PTBP3-205ENST00000374257 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
PTBP3-205ENST00000374257 MINK1Q8N4C8 1332 aaPredicted RBP10.97□□□□□ -0.65
PTBP3-205ENST00000374257 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.97□□□□□ -0.65
PTBP3-205ENST00000374257 DHX57Q6P158 1386 aaKnown RBP10.97□□□□□ -0.65
PTBP3-205ENST00000374257 C9orf84Q5VXU9 1444 aa10.96□□□□□ -0.66
PTBP3-205ENST00000374257 CC2D1BQ5T0F9 858 aaKnown RBP10.96□□□□□ -0.66
PTBP3-205ENST00000374257 EVC2Q86UK5 1308 aa10.96□□□□□ -0.66
PTBP3-205ENST00000374257 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
PTBP3-205ENST00000374257 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
PTBP3-205ENST00000374257 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
PTBP3-205ENST00000374257 CEBPAP49715 358 aaPredicted RBP10.94□□□□□ -0.66
PTBP3-205ENST00000374257 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms