RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 FBLN2P98095 1184 aa18.71■□□□□ 0.59
PRPF4-202ENST00000374199 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
PRPF4-202ENST00000374199 ABCC5O15440 1437 aa18.7■□□□□ 0.58
PRPF4-202ENST00000374199 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
PRPF4-202ENST00000374199 ZCCHC11Q5TAX3 1644 aaKnown RBP18.69■□□□□ 0.58
PRPF4-202ENST00000374199 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
PRPF4-202ENST00000374199 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
PRPF4-202ENST00000374199 TTC37Q6PGP7 1564 aa18.63■□□□□ 0.57
PRPF4-202ENST00000374199 MAST1Q9Y2H9 1570 aa18.63■□□□□ 0.57
PRPF4-202ENST00000374199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF4-202ENST00000374199 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
PRPF4-202ENST00000374199 MYO5CQ9NQX4 1742 aa18.61■□□□□ 0.57
PRPF4-202ENST00000374199 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
PRPF4-202ENST00000374199 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
PRPF4-202ENST00000374199 MBD5Q9P267 1494 aa18.59■□□□□ 0.57
PRPF4-202ENST00000374199 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
PRPF4-202ENST00000374199 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
PRPF4-202ENST00000374199 ITGAEP38570 1179 aa18.55■□□□□ 0.56
PRPF4-202ENST00000374199 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
PRPF4-202ENST00000374199 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
PRPF4-202ENST00000374199 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
PRPF4-202ENST00000374199 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
PRPF4-202ENST00000374199 ABCA9Q8IUA7 1624 aa18.49■□□□□ 0.55
PRPF4-202ENST00000374199 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
PRPF4-202ENST00000374199 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
PRPF4-202ENST00000374199 PZPP20742 1482 aa18.47■□□□□ 0.55
PRPF4-202ENST00000374199 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
PRPF4-202ENST00000374199 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
PRPF4-202ENST00000374199 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
PRPF4-202ENST00000374199 ABCC1P33527 1531 aa18.45■□□□□ 0.54
PRPF4-202ENST00000374199 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
PRPF4-202ENST00000374199 UNC13BO14795 1591 aa18.44■□□□□ 0.54
PRPF4-202ENST00000374199 PLCH2O75038 1416 aa18.43■□□□□ 0.54
PRPF4-202ENST00000374199 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
PRPF4-202ENST00000374199 SYCP2Q9BX26 1530 aa18.41■□□□□ 0.54
PRPF4-202ENST00000374199 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
PRPF4-202ENST00000374199 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
PRPF4-202ENST00000374199 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
PRPF4-202ENST00000374199 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
PRPF4-202ENST00000374199 ARHGAP5Q13017 1502 aa18.37■□□□□ 0.53
PRPF4-202ENST00000374199 ANKRD30BQ9BXX2 1392 aa18.37■□□□□ 0.53
PRPF4-202ENST00000374199 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
PRPF4-202ENST00000374199 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
PRPF4-202ENST00000374199 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
PRPF4-202ENST00000374199 TEX14Q8IWB6 1497 aa18.35■□□□□ 0.53
PRPF4-202ENST00000374199 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
PRPF4-202ENST00000374199 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PRPF4-202ENST00000374199 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.53
PRPF4-202ENST00000374199 DEPDC5O75140 1603 aa18.32■□□□□ 0.52
PRPF4-202ENST00000374199 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
PRPF4-202ENST00000374199 PPP1R15AO75807 674 aaPredicted RBP18.31■□□□□ 0.52
PRPF4-202ENST00000374199 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
PRPF4-202ENST00000374199 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
PRPF4-202ENST00000374199 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
PRPF4-202ENST00000374199 ZFYVE16Q7Z3T8 1539 aa18.3■□□□□ 0.52
PRPF4-202ENST00000374199 DUOX2Q9NRD8 1548 aa18.3■□□□□ 0.52
PRPF4-202ENST00000374199 RTEL1-TNFRSF6BF6WH68 1400 aa18.29■□□□□ 0.52
PRPF4-202ENST00000374199 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
PRPF4-202ENST00000374199 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
PRPF4-202ENST00000374199 CFAP74Q9C0B2 1584 aa18.27■□□□□ 0.52
PRPF4-202ENST00000374199 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
PRPF4-202ENST00000374199 EIF2AK4Q9P2K8 1649 aaKnown RBP18.25■□□□□ 0.51
PRPF4-202ENST00000374199 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
PRPF4-202ENST00000374199 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
PRPF4-202ENST00000374199 FAM135AQ9P2D6 1515 aa18.24■□□□□ 0.51
PRPF4-202ENST00000374199 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
PRPF4-202ENST00000374199 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
PRPF4-202ENST00000374199 ATP10AO60312 1499 aa18.22■□□□□ 0.51
PRPF4-202ENST00000374199 KDM5CP41229 1560 aa18.21■□□□□ 0.51
PRPF4-202ENST00000374199 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
PRPF4-202ENST00000374199 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
PRPF4-202ENST00000374199 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
PRPF4-202ENST00000374199 HNRNPMP52272 730 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRPF4-202ENST00000374199 GLI2P10070 1586 aa18.18■□□□□ 0.5
PRPF4-202ENST00000374199 FANCAO15360 1455 aa18.17■□□□□ 0.5
PRPF4-202ENST00000374199 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
PRPF4-202ENST00000374199 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
PRPF4-202ENST00000374199 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
PRPF4-202ENST00000374199 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
PRPF4-202ENST00000374199 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
PRPF4-202ENST00000374199 TSPY4P0CV99 314 aa18.15■□□□□ 0.5
PRPF4-202ENST00000374199 TSPY10P0CW01 314 aa18.15■□□□□ 0.5
PRPF4-202ENST00000374199 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.5
PRPF4-202ENST00000374199 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.5
PRPF4-202ENST00000374199 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.5
PRPF4-202ENST00000374199 NEURL4Q96JN8 1562 aa18.14■□□□□ 0.49
PRPF4-202ENST00000374199 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
PRPF4-202ENST00000374199 RNF17Q9BXT8 1623 aaKnown RBP18.13■□□□□ 0.49
PRPF4-202ENST00000374199 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
PRPF4-202ENST00000374199 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
PRPF4-202ENST00000374199 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
PRPF4-202ENST00000374199 PLA2R1Q13018 1463 aa18.11■□□□□ 0.49
PRPF4-202ENST00000374199 TET3O43151 1660 aa18.1■□□□□ 0.49
PRPF4-202ENST00000374199 TRIM52Q96A61 297 aa18.1■□□□□ 0.49
PRPF4-202ENST00000374199 E9PCH4 1651 aa18.1■□□□□ 0.49
PRPF4-202ENST00000374199 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
PRPF4-202ENST00000374199 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
PRPF4-202ENST00000374199 LAMC1P11047 1609 aa18.08■□□□□ 0.49
PRPF4-202ENST00000374199 NUP155O75694 1391 aa18.08■□□□□ 0.48
PRPF4-202ENST00000374199 NEO1Q92859 1461 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms