RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
PEF1-201ENST00000373703 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
PEF1-201ENST00000373703 CDC42BPBQ9Y5S2 1711 aa22.87■■□□□ 1.25
PEF1-201ENST00000373703 ZNF777Q9ULD5 760 aaPredicted RBP22.86■■□□□ 1.25
PEF1-201ENST00000373703 ARAP3Q8WWN8 1544 aa22.85■■□□□ 1.25
PEF1-201ENST00000373703 MYOM3Q5VTT5 1437 aa22.83■■□□□ 1.25
PEF1-201ENST00000373703 ITSN2Q9NZM3 1697 aa22.83■■□□□ 1.24
PEF1-201ENST00000373703 NEO1Q92859 1461 aa22.82■■□□□ 1.24
PEF1-201ENST00000373703 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
PEF1-201ENST00000373703 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
PEF1-201ENST00000373703 ZNF644Q9H582 1327 aaPredicted RBP22.79■■□□□ 1.24
PEF1-201ENST00000373703 ADGRL1O94910 1474 aa22.76■■□□□ 1.23
PEF1-201ENST00000373703 MIA2Q96PC5 1412 aa22.76■■□□□ 1.23
PEF1-201ENST00000373703 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
PEF1-201ENST00000373703 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
PEF1-201ENST00000373703 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
PEF1-201ENST00000373703 SCAPERQ9BY12 1400 aa22.75■■□□□ 1.23
PEF1-201ENST00000373703 RAPGEF3O95398 923 aa22.71■■□□□ 1.23
PEF1-201ENST00000373703 HNRNPMP52272 730 aaKnown RBP eCLIP22.71■■□□□ 1.23
PEF1-201ENST00000373703 CAMSAP2Q08AD1 1489 aa22.71■■□□□ 1.23
PEF1-201ENST00000373703 ABCC1P33527 1531 aa22.71■■□□□ 1.23
PEF1-201ENST00000373703 KDM6BO15054 1643 aa22.71■■□□□ 1.23
PEF1-201ENST00000373703 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.23
PEF1-201ENST00000373703 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
PEF1-201ENST00000373703 PLEKHH2Q8IVE3 1493 aa22.69■■□□□ 1.22
PEF1-201ENST00000373703 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
PEF1-201ENST00000373703 SYCP2Q9BX26 1530 aa22.68■■□□□ 1.22
PEF1-201ENST00000373703 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
PEF1-201ENST00000373703 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
PEF1-201ENST00000373703 AFAP1Q8N556 730 aa22.67■■□□□ 1.22
PEF1-201ENST00000373703 TRAPPC8Q9Y2L5 1435 aa22.66■■□□□ 1.22
PEF1-201ENST00000373703 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
PEF1-201ENST00000373703 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
PEF1-201ENST00000373703 MBD5Q9P267 1494 aa22.64■■□□□ 1.21
PEF1-201ENST00000373703 FRMPD1Q5SYB0 1578 aa22.62■■□□□ 1.21
PEF1-201ENST00000373703 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
PEF1-201ENST00000373703 RICTORQ6R327 1708 aa22.61■■□□□ 1.21
PEF1-201ENST00000373703 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
PEF1-201ENST00000373703 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.21
PEF1-201ENST00000373703 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
PEF1-201ENST00000373703 CCDC141Q6ZP82 1450 aa22.57■■□□□ 1.2
PEF1-201ENST00000373703 ARHGEF5Q12774 1597 aa22.56■■□□□ 1.2
PEF1-201ENST00000373703 KDM5CP41229 1560 aa22.55■■□□□ 1.2
PEF1-201ENST00000373703 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
PEF1-201ENST00000373703 ABCC5O15440 1437 aa22.54■■□□□ 1.2
PEF1-201ENST00000373703 TSPY4P0CV99 314 aa22.54■■□□□ 1.2
PEF1-201ENST00000373703 TSPY10P0CW01 314 aa22.54■■□□□ 1.2
PEF1-201ENST00000373703 ITGAEP38570 1179 aa22.53■■□□□ 1.2
PEF1-201ENST00000373703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.2
PEF1-201ENST00000373703 DAPK1P53355 1430 aa22.53■■□□□ 1.2
PEF1-201ENST00000373703 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.2
PEF1-201ENST00000373703 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
PEF1-201ENST00000373703 MLH3Q9UHC1 1453 aa22.5■■□□□ 1.19
PEF1-201ENST00000373703 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
PEF1-201ENST00000373703 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
PEF1-201ENST00000373703 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
PEF1-201ENST00000373703 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
PEF1-201ENST00000373703 C9orf84Q5VXU9 1444 aa22.47■■□□□ 1.19
PEF1-201ENST00000373703 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
PEF1-201ENST00000373703 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
PEF1-201ENST00000373703 KIDINS220Q9ULH0 1771 aa22.46■■□□□ 1.19
PEF1-201ENST00000373703 PTPRKQ15262 1439 aa22.46■■□□□ 1.19
PEF1-201ENST00000373703 INO80Q9ULG1 1556 aaPredicted RBP22.45■■□□□ 1.18
PEF1-201ENST00000373703 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
PEF1-201ENST00000373703 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
PEF1-201ENST00000373703 SHANK2Q9UPX8 1470 aa22.44■■□□□ 1.18
PEF1-201ENST00000373703 MAST1Q9Y2H9 1570 aa22.43■■□□□ 1.18
PEF1-201ENST00000373703 ARHGEF40Q8TER5 1519 aa22.42■■□□□ 1.18
PEF1-201ENST00000373703 ABCA6Q8N139 1617 aa22.41■■□□□ 1.18
PEF1-201ENST00000373703 DIP2CQ9Y2E4 1556 aa22.4■■□□□ 1.18
PEF1-201ENST00000373703 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.18
PEF1-201ENST00000373703 ATP10AO60312 1499 aa22.39■■□□□ 1.17
PEF1-201ENST00000373703 ANKRD30AQ9BXX3 1397 aa22.37■■□□□ 1.17
PEF1-201ENST00000373703 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
PEF1-201ENST00000373703 ADGRL2O95490 1459 aa22.35■■□□□ 1.17
PEF1-201ENST00000373703 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
PEF1-201ENST00000373703 PLXNC1O60486 1568 aa22.34■■□□□ 1.17
PEF1-201ENST00000373703 A2MP01023 1474 aa22.33■■□□□ 1.17
PEF1-201ENST00000373703 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
PEF1-201ENST00000373703 ROCK1Q13464 1354 aa22.32■■□□□ 1.16
PEF1-201ENST00000373703 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
PEF1-201ENST00000373703 DHX29Q7Z478 1369 aaKnown RBP22.31■■□□□ 1.16
PEF1-201ENST00000373703 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
PEF1-201ENST00000373703 SIGLEC1Q9BZZ2 1709 aa22.29■■□□□ 1.16
PEF1-201ENST00000373703 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
PEF1-201ENST00000373703 DUOX2Q9NRD8 1548 aa22.28■■□□□ 1.16
PEF1-201ENST00000373703 MLECQ14165 292 aa22.25■■□□□ 1.15
PEF1-201ENST00000373703 KIF3BO15066 747 aa22.24■■□□□ 1.15
PEF1-201ENST00000373703 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
PEF1-201ENST00000373703 AGLP35573 1532 aa22.22■■□□□ 1.15
PEF1-201ENST00000373703 NAIPQ13075 1403 aa22.22■■□□□ 1.15
PEF1-201ENST00000373703 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
PEF1-201ENST00000373703 HFM1A2PYH4 1435 aa22.21■■□□□ 1.15
PEF1-201ENST00000373703 GGT6Q6P531 493 aa22.2■■□□□ 1.15
PEF1-201ENST00000373703 EIF2AK4Q9P2K8 1649 aaKnown RBP22.16■■□□□ 1.14
PEF1-201ENST00000373703 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
PEF1-201ENST00000373703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.14■■□□□ 1.14
PEF1-201ENST00000373703 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.13
PEF1-201ENST00000373703 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
PEF1-201ENST00000373703 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms